Commit Graph

3548 Commits

Author SHA1 Message Date
Allen Byrne
6e77a5800e Correct varname 2019-02-26 10:40:40 -06:00
Quincey Koziol
d6663b95ac Revise "management" VOL callbacks into 'info' and object 'wrap / retrieval'
classes.
2019-02-23 17:02:29 -06:00
Jerome Soumagne
342cad2a3d Merge pull request #1569 in HDFFV/hdf5 from ~JSOUMAGNE/hdf5:topic_threadsafe to develop
* commit 'bcf5c400c06bf06820b25c37eceaa97245f15f1f':
  Fix CMake H5_HAVE_THREADSAFE to set value in H5pubconf.h
2019-02-21 18:18:39 -06:00
Jerome Soumagne
bcf5c400c0 Fix CMake H5_HAVE_THREADSAFE to set value in H5pubconf.h
Add REQUIRED to find_package(Threads)

Link against thread library if static and not WIN32 platform
2019-02-21 16:39:37 -06:00
Dana Robinson
32ea4e72f1 Merge branch 'develop' into c_stdlib_posix_call_cleanup 2019-02-19 14:49:20 -08:00
Allen Byrne
67bc117efe Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '5ad3891d9b861593ebe25d540bed2d913eb83aba':
  Remove ' ' (typo).
  Code improvement
  Removed an extra "using" statement
  Adding documentation
  More changes to align with incoming selection improvements.
  Added C++ wrapper for H5Ovisit2
  Adding a C++ wrapper
2019-02-17 09:42:00 -06:00
Allen Byrne
58e6e3e102 HDFFV-10703 macro vars need quotes 2019-02-15 16:04:06 -06:00
Allen Byrne
122b63a5a2 HDFFV-10703 Update CMake commands to latest standard 2019-02-15 15:48:24 -06:00
Quincey Koziol
e1046db0e6 Merge pull request #1548 in HDFFV/hdf5 from merge_hyperslab_updates_04 to develop
* commit '320eaf91b9adb36bb0fed9264d460e4a808200b7':
  More changes to align with incoming selection improvements.
2019-02-15 14:12:16 -06:00
Quincey Koziol
320eaf91b9 More changes to align with incoming selection improvements. 2019-02-14 16:20:32 -06:00
Allen Byrne
35e9128c7e Skip testing of cache_image test 2019-02-14 12:52:01 -06:00
Quincey Koziol
10cdff5ca4 Merge pull request #1540 in HDFFV/hdf5 from merge_hyperslab_changes_01 to develop
* commit 'fb5d1a37c11bca613175a48262a2147e99c9dede':
  Align develop with incoming hyperslab_updates branch changes.
2019-02-13 18:13:18 -06:00
Allen Byrne
b95f05638c TRILAB-111 fixes for parallel testing 2019-02-13 15:53:59 -06:00
Quincey Koziol
b5305b25a6 Align develop with incoming hyperslab_updates branch changes. 2019-02-12 21:51:15 -06:00
Allen Byrne
36e3d1600a Refactor out timeout values 2019-02-06 16:41:58 -06:00
Binh-Minh Ribler
55d1931dc6 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_fixbug into develop 2019-01-26 11:59:45 -06:00
Binh-Minh Ribler
f522479035 Added test file for CMake 2019-01-26 11:58:52 -06:00
Dana Robinson
3fac85c00d Fixed a bug identified by valgrind in the cork test. 2019-01-25 09:58:50 -08:00
Binh-Minh Ribler
0247f7b78d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~bmribler/hdf5_bmr_fixbug into develop 2019-01-25 00:20:28 -06:00
Binh-Minh Ribler
51e0107d18 Added data file for test and updated MANIFEST 2019-01-25 00:19:16 -06:00
Binh-Minh Ribler
2fe69e7639 Merge pull request #1479 in HDFFV/hdf5 from ~BMRIBLER/hdf5_bmr_fixbug:develop to develop
HDFFV-10586 and HDFFV-10588

* commit '25cd1ab02b9ddaf58a4f5422f4ab4fde411e050a':
  Added test for HDFFV-10588
  Fixed HDFFV-10684
  Fixed HDFFV-10586 and HDFFV-10588 Description:     HDFFV-10586 CVE-2018-17434  Divide by zero inh5repack_filters         Added a check for zero value     HDFFV-10588 CVE-2018-17437  Memory leak in H5O_dtype_decode_helper         This is actually an Invalid read issue.  It was found that the         attribute name length in an attribute message was corrupted,         which caused the buffer pointer to be advanced too far and later         caused an invalid read.         Added a check to detect attribute name and its length mismatch.  The         fix is not perfect, but it'll reduce the chance of this issue when a         name length is corrupted or the attribute name is corrupted. Platforms tested:     Linux/64 (jelly)     Linux/64 (platypus)     Darwin (osx1010test)
2019-01-24 17:07:57 -06:00
Binh-Minh Ribler
25cd1ab02b Added test for HDFFV-10588
Platforms tested:
    Linux/64 (jelly)
    Linux/64 (platypus)
    Darwin (osx1010test)
2019-01-24 09:42:19 -06:00
Dana Robinson
a4e63bb980 Fixed a memory issue flagged by valgrind in the direct_chunk test. 2019-01-16 21:37:07 -08:00
Quincey Koziol
47fb7c2ee6 Update usage for FAPLs, and reduce # of groups for smoke checks 2019-01-16 10:36:25 -06:00
Quincey Koziol
3a31d37abb Work around compiler fussiness on platypus. 2019-01-11 10:11:31 -06:00
Quincey Koziol
4729d04d91 Delta reduction against hyperslab_updates branch. 2019-01-10 23:08:51 -06:00
Dana Robinson
536a32c59b C and POSIX call cleanup 2019-01-10 17:51:42 -08:00
Jordan Henderson
294d9c2847 Merge pull request #1455 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to develop
* commit '2d7eb9a4c3a841f7612b88f6b559792cb6143930':
  Align behavior of H5Aget_name_by_idx with H5Aget_name when a NULL buffer is supplied
2019-01-08 20:32:46 -06:00
Ray Lu
44a67451be Merge pull request #1450 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:TRILAB-98-dt_arith-and-cpp_testhdf5-tests to develop
* commit 'b02de315b93ac29d2483a91d526b110a25073505':
  NNSA Tri-LabsTRILAB-98: Another two test cases out.
  NNSA Tri-Labs TRILAB-98: Taking out a few more test cases.
  NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu).  All failing cases involve long double data type.
2019-01-08 17:59:03 -06:00
Jordan Henderson
2d7eb9a4c3 Align behavior of H5Aget_name_by_idx with H5Aget_name when a NULL buffer is supplied 2019-01-08 15:52:30 -06:00
Songyu Lu
b02de315b9 NNSA Tri-LabsTRILAB-98: Another two test cases out. 2019-01-08 14:31:41 -06:00
Songyu Lu
2efc28cf63 NNSA Tri-Labs TRILAB-98: Taking out a few more test cases. 2019-01-08 12:45:01 -06:00
Songyu Lu
75c105a2a4 NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu). All failing cases involve long double data type. 2019-01-07 20:28:37 -06:00
Neil Fortner
b043126e5e Delay checking if decoded message's "shareable" flag is appropriate for
the message type until we've verified we understand the message type.
Reduce size of H5O_msg_class_g to *not* include space for
H5O_BOGUS_INVALID.  Make bogus messages shareable.  Add new bogus
message test with shareable messages to cover the formerly problematic
code.  Re-run gen_bogus.c to add this test case and also to fix the
bogus_invalid messages that were no longer H5O_BOGUS_INVLAID due to a
new message class being added in a previous commit.  Added comment to
remind developers to run gen_bogus.c when adding a new message class.
2019-01-07 15:40:44 -06:00
Vailin Choi
e52e68c82f Merge pull request #1445 in HDFFV/hdf5 from ~VCHOI/my_hdf5_fork:develop to develop
* commit '982852c603c03a06ca24f219127f49616c7d42cb':
  Fix for daily test failure: too many arguments to function 'H5Gopen1'
2019-01-07 14:15:05 -06:00
Jordan Henderson
0bc3d1567b Merge pull request #1434 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to develop
* commit 'fe6bed2ad722578d0b701e29d22f591923d2fe9f':
  Fix TESTING_2 macro to align output with TESTING macro
2019-01-07 14:11:07 -06:00
Jordan Henderson
fe6bed2ad7 Fix TESTING_2 macro to align output with TESTING macro
Add more indentation to TESTING_2 macro
2019-01-07 14:08:34 -06:00
Vailin Choi
982852c603 Fix for daily test failure: too many arguments to function 'H5Gopen1' 2019-01-07 11:49:53 -06:00
Quincey Koziol
f0656a57dc Remove incorrect comment. 2019-01-06 01:49:02 -06:00
Quincey Koziol
92300f954f Corrected comment in src/H5VLint.c, fixed pass-through info size in
src/H5VLpassthru.c, switched to stashing VOL connector ID & info in
API context (in src/H5CX.c, src/H5CXprivate.h, src/H5F.c, src/H5Fint.c, and
src/H5Fefc.c), patched up all sorts of issues in the tests, to make them work
with 'check-vfd' (and 'check-vol' again).
2019-01-05 23:06:45 -06:00
Jordan Henderson
b0feaecdb9 Merge pull request #1425 in HDFFV/hdf5 from ~JHENDERSON/hdf5:develop to develop
* commit '659dd9bccf69f32bfdd01dc49410116ec5c1b0bb':
  Align H5Lcreate_ud behavior with documentation for NULL udata pointer
2019-01-04 14:06:10 -06:00
Jacob Smith
f7115c3136 Remove "bad" statements at end of TEST_ERROR.
Formerly arguments to FAIL_PUTS_ERROR
2019-01-04 11:28:39 -06:00
Jacob Smith
a0c6e622e4 Add semicolon at end of TEST_ERROR() invocation for consistency. 2019-01-04 09:07:55 -06:00
Jacob Smith
763db8178e Change FAIL_PUTS_ERROR to TEST_ERROR. 2019-01-03 23:02:20 -06:00
Jacob Smith
3b53747b3a Update calls: H5Dcreate to H5Dcreate2, H5Acreate to H5Acreate2. 2019-01-03 14:44:57 -06:00
Jordan Henderson
659dd9bccf Align H5Lcreate_ud behavior with documentation for NULL udata pointer
Add test for H5Lcreate_ud fix
2019-01-03 09:35:44 -06:00
Vailin Choi
d3dff6efe6 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into develop
Resolve conflicts:
Conflicts:
	test/Makefile.am
2019-01-02 13:23:54 -06:00
Jacob Smith
8324be7fad fix wrong function name that is missed by correctional macro 2018-12-31 15:18:13 -06:00
Dana Robinson
b30a1fe44a Merge pull request #1400 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:openmpi_tweaks to develop
* commit 'd6c2a96ac2f103d90b96d5b39814810e6a31ef99':
  Updated the parallel install docs.
  Eliminated the need for a separate script variable.
  Added a helpful message to the flush script.
  Added a shell script so we can run the parallel flush test on OpenMPI.
2018-12-31 13:33:31 -06:00
Dana Robinson
fba448b145 Merge pull request #1413 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:yay_plugins to develop
* commit '3ca19cca5395d79be69209f8d7d0a2b06834a648':
  Flipped swapped testing strings.
  Added test_vol_plugin.sh to the list of scripts to clean
  Fixed a CMake build issue (CMake still doesn't run the VOL plugin tests)
  Added more sub-tests to the VOL plugin test.
  Added a simple test for registration of VOL connector plugins. Autotools only for right now, but this will be fleshed out in future work.
2018-12-31 10:28:25 -06:00