Commit Graph

12588 Commits

Author SHA1 Message Date
Allen Byrne
e8a1954c9e [svn-r22727] Add other h5 files needed by pbits tests 2012-08-30 09:50:06 -05:00
Allen Byrne
612af6440b [svn-r22724] Convert tests to *.sh.in.
Convert configure.in to configure.ac.
Align TESTS usage with autotools convention.
Update all references from configure.in to configure.ac

Tested: h5committest
2012-08-28 14:11:34 -05:00
Allen Byrne
0bc6398ec4 [svn-r22721] HDFFV-8133: Add usage text to see Reference manual for compact subsetting. 2012-08-28 12:42:00 -05:00
Allen Byrne
5336fb2d01 [svn-r22719] Fix RelWithDebInfo packaging
Tested: windows
2012-08-28 12:38:44 -05:00
Allen Byrne
8b271f6ca5 [svn-r22717] Update list of tools fixes. 2012-08-27 11:15:45 -05:00
HDF Tester
189abd52ac [svn-r22715] Snapshot version 1.8 release 10 (snap8) 2012-08-26 19:32:58 -05:00
Larry Knox
073ba00980 [svn-r22711] Updated autotools: autoconf 2.69, automake 1.12.3, m4 1.4.16, libtool 2.4.2
Tested THG machines.
2012-08-23 12:05:07 -05:00
Quincey Koziol
88a382c1c7 [svn-r22708] Description:
Bring r22707 from trunk to 1.8 branch:

    Bring back some more cleanups from the plist_encode_decode branch, clean up
some formatting and compiler errors, and add a few more property comparison
routines that we've skipped implementing in the past.

Tested on:
    Mac OSX/64 10.7.4 (amazon) w/debug
    (Too minor to require h5committest)
2012-08-22 14:39:01 -05:00
Jonathan Kim
dc7748afb9 [svn-r22701] Purpose:
Address HDFFV-7942 - h5diff: incorrect result for comparing attribute data with different type size in same class

Description:
   When comparing attribute data values with same type class but different size, the result was incorrect.  It was due to the size difference and got truncated. 
   Fixed to match up the smaller type size to big type size like what dataset does.
   Merged from HDF5 trunk r22684 and r22691.

  
Tested: 
 jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), Windows (32-LE cmake), cmake (jam)
2012-08-20 15:11:58 -05:00
Allen Byrne
b169fa28ff [svn-r22699] Merge trunk 22674 to 1.8:
Remove checks for filters are available because the h5dump tests never used the filters in the tests. "-H" option excludes data.
HDFFV-8125
2012-08-20 11:47:39 -05:00
Quincey Koziol
bdb3343f30 [svn-r22682] Description:
Bring r22681 from trunk to 1.8 branch:

    Clean up file driver property handling, along with some misc. warnings.

Tested on:
    Mac OSX/64 10.7.4 (amazon) w/debug, gcc 4.7.1, C++, FORTRAN & threadsafe
    (h5committest upcoming)
2012-08-15 10:25:42 -05:00
Vailin Choi
2ab1d8cc0c [svn-r22677] Changes needed to make the default free-list mapping from H5FD_FLMAP_SINGLE to H5FD_FLMAP_DICHOTOMY.
Also changed H5O_copy_search_comm_dt_check() to use H5O_obj_class() to get object type instead of H5O_get_info(...TRUE...) saving time in traversing metadata.
2012-08-13 19:33:19 -05:00
HDF Tester
20d05ae593 [svn-r22671] Snapshot version 1.8 release 10 (snap7) 2012-08-12 19:30:24 -05:00
Albert Cheng
6acaf24bdd [svn-r22658] Bug fix: previous commit has a mistake--it used the wrong type of return
value of FAIL. The function type is a pointer. Fixed it by changing it to NULL.

Tested: In remote machine ADA (aix).
2012-08-09 18:58:37 -05:00
Mohamad Chaarawi
4e22de6e90 [svn-r22652] bring 22651 to branch
fix a bug that would skip or include the parallel atomicity test with cmd arguments -o or -x
2012-08-09 13:10:47 -05:00
Allen Byrne
e7561408fb [svn-r22649] Allow second find_package call for legacy libraries (not cmake-configured) 2012-08-09 09:39:12 -05:00
Quincey Koziol
4e6b652c3d [svn-r22647] Description:
Bring r22646 from trunk to 1.8 branch:

    Changes resulting from Klocwork static analysis tool, from Mark Miller
@ LLNL (miller86@llnl.gov).

Tested on:
    Mac OS X/64 10.7.4 (amazon) w/debug, C++ & FORTRAN, using gcc 4.7.x
    (too minor to require h5committest)
2012-08-08 20:02:02 -05:00
Allen Byrne
98ac51ba1c [svn-r22643] Correct check for filters in tools test 2012-08-08 12:04:40 -05:00
Allen Byrne
28504a15f6 [svn-r22639] HDFFV-8111: Remove special case shortcut and use normal path for comparing single objects.
Merged from trunk
2012-08-07 14:11:21 -05:00
Allen Byrne
65b620ea49 [svn-r22634] Update CMake configuration files for current packaging layout 2012-08-06 11:40:49 -05:00
Allen Byrne
c2491932d9 [svn-r22632] Merge from trunk revision 22631
tested: local linux
2012-08-06 09:18:55 -05:00
Larry Knox
451fd8514b [svn-r22630] Snapshot version 1.8 release 10 (snap6) 2012-08-05 19:52:07 -05:00
Quincey Koziol
53ac57325c [svn-r22628] Description:
Bring r22627 from trunk to 1.8 branch:

    Merge some of the changes on the plist_encode_decode branch back to the
trunk.

Tested on:
    Mac OSX/64 10.7.4 (amazon) w/debug
    (Too minor to require h5committest)
2012-08-03 19:17:30 -05:00
Jonathan Kim
e8197d1941 [svn-r22621] Purpose:
HDFFV-8107 testh5diff will fail if build/test in HDF5 source tree

Description:
  This is sub-task for "HDFFV-8105 testh5diff.sh uses the wrong operator (-a) in an if statement."
  From the HDFFV-8105's update, h5diff test failed if build&test is performed in HDF5 source tree because 'cp' try to copy test files to self dir. 
  It's addressed by skipping if cp's src dir and dest dir is same.
  Also this applied for all other tools under src/tools dir.
  No change to the CMakeLists.txt files because CMake cautions/demands that in-source builds be avoided.
  Merged from HDF5 trunk r22617.

  
Tested: 
 jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), some manual tests as well
2012-08-02 14:32:38 -05:00
Jonathan Kim
62455bb025 [svn-r22619]
Purpose:
  HDFFV-8003 - ph5diff (parallel h5diff): daily test failure on ember intermittently during non comparable test file comparison
  HDFFV-7755 - parallel h5diff : hanging on koala intermittently during non comparable test file comparison

Description:
  non-comparable test intermittently hung on koala and ember, but not on jam. it didn't occur until -np reaches 4 or bigger. it occurred once out of many repeated attempts of the same test.
  There was a incorrectly (mistakenly?) duplicated code in MPI section which caused such hang in a certain condition. The test used more processes than other tests, which increased chance to trigger more undone processes, and such process could enter the incorrect code section and wait for wrong pair of send. it explains why it occurred intermittently according to machine condition and using a certain feature. 
  Removed incorrect code which blocked correct code.
  Merged from HDF5 trunk r22618.
  
Tested:
 jam (linux32-LE), koala (linux64-LE), ostrich (linuxppc64-BE), some manually repeated test performed in parallel
2012-08-02 11:10:03 -05:00
Quincey Koziol
0728b38ddd [svn-r22609] Description:
Bring r22608 from trunk to 1.8 branch:

    Switch propert list/class iteration from internal to external form of
iteration, cleaning up and simplifying the code a bit.

    Bring other general improvements from plist_encode_decode branch back to
trunk.

    Clean up many warnings.


Tested on:
    Mac OSX/64 10.7.4 (amazon) w/gcc 4.7, debug and C++ & FORTRAN
    (too minor to require h5committest)
2012-07-26 15:03:12 -05:00
Neil Fortner
0ea9a38644 [svn-r22607] Port test from r22601 from trunk to 1.8 branch. Also remove spurious
FUNC_ENTER_PACKAGE_TAG and FUNC_ENTER_STATIC_TAG macros.

Tested: jam, koala, ostrich (h5committest), durandal
2012-07-26 13:12:00 -05:00
Albert Cheng
85d0f3befd [svn-r22595] Bug fix: HDFFV-8105
Description:
The test command in COPY_TESTFILES_TO_TESTDIR used the wrong operator -a which
means and. It is not sufficient to test mere existence as $tstfile could have
been a directory or other non-file things.  If the file is not readable, the
$CP command would fail but its return code was not checked.

Solution:
Get rid of the test command and go ahead to $CP it and then check its returned
code and report errors if detected.

Tested; committested.
2012-07-22 15:52:34 -05:00
Raymond Lu
dfebc04ff6 [svn-r22585] Issue 8068 - A user reported some random data in the padding of fill value. The problem happened in H5P_get_fill_value. I believe it's because the background buffer wasn't big enough. So I corrected it in this checkin.
Tested on jam - simple change.  I'm porting the fix from the trunk.
2012-07-17 11:05:16 -05:00
Quincey Koziol
43995f12ac [svn-r22583] Description:
Bring r22582 from trunk to 1.8 branch:

    Refactor ID class registration to be more like how other "class"s in the
library are registered, and clean up compiler warnings.

Tested on:
    Mac OSX/64 10.7.4 (amazon) w/debug
    (Too minor to require h5comittest)
2012-07-16 15:28:44 -05:00
Allen Byrne
0f43d84b3c [svn-r22580] HDFFV-7936: update legacy tests 2012-07-16 10:55:58 -05:00
Allen Byrne
e89ecb8b21 [svn-r22578] Windows compilers require declarations at top of routine. 2012-07-16 10:08:25 -05:00
Allen Byrne
8d05b733b9 [svn-r22572] Re-Merge attr name with slash changes from trunk
Tested: localinux with cmake
2012-07-13 11:31:52 -05:00
Allen Byrne
d9ba5c234c [svn-r22571] HDFFV-7784,-8095,7936 merge from trunk
Tested: local linux with cmake
2012-07-13 10:18:27 -05:00
Allen Byrne
5096b7d3ec [svn-r22551] Merge changes from Trunk revision 22550 for:
HDFFV-4206, -7953, -5930, -2687, -5942

Tested: local linux with cmake
2012-07-11 10:15:21 -05:00
Allen Byrne
91de89d57e [svn-r22538] Correct error string contents 2012-07-10 09:24:24 -05:00
Allen Byrne
9cd0f549ab [svn-r22536] added missing break to end of case statement 2012-07-10 08:58:50 -05:00
Larry Knox
f49fe94a09 [svn-r22524] Snapshot version 1.8 release 10 (snap6) 2012-07-09 11:52:38 -05:00
Allen Byrne
434466e58e [svn-r22517] HDFFV-7782: h5import testfiles duplicated to match testname. (Consistent naming)
Tested: local linux using CMake
2012-07-05 15:06:56 -05:00
Allen Byrne
029ac0e3c8 [svn-r22514] Correct failure REGEX test to test value of TEST_EXPECT 2012-07-05 09:36:53 -05:00
Scot Breitenfeld
11861e6618 [svn-r22509] Merged changes from the trunk into the branch:
svn merge -r 22163:22479 https://svn.hdfgroup.uiuc.edu/hdf5/trunk/fortran

Fixed merged issue with fortran/test/tH5E_F03.f90 (missing part of the file) and
changed Makefile.am accordingly.
2012-07-02 20:12:37 -05:00
Elena Pourmal
d05e1c8ca1 [svn-r22503] Maintenance:
See HELPDESK-643 issue in JIRA.
NAG Fortran compiler doesn't like the current tH5E_F03.f90 file that has only comments
and no executable statements. Removed tH5E_F03.f90 from the list of modules to build.

Tested on jam with PGI compiler using --enable-fortran2003 flag. Will point the user to a 
snapshot when it is available.
2012-06-29 15:39:37 -05:00
Raymond Lu
52de056071 [svn-r22493] I took out the "return an error" line in H5Dget_offset, to match what the RM says about the function behavior.
Quincey added it some time ago without realizing it caused test errors (Issue 8072).

Tested on ostrich, but imported the fix from the trunk - simple change.
2012-06-26 17:17:40 -05:00
Larry Knox
97da6adcd0 [svn-r22492] Needed std:: for cout or cerr for other compilers. 2012-06-26 15:56:59 -05:00
Larry Knox
35936e66b7 [svn-r22491] Skip the failing File Creation I/O subtest that causes c++ tests to fail with the new/PGI compiler (see HDFFV-8067).
Tested on jam.
2012-06-26 13:28:45 -05:00
HDF Tester
11ddad75fb [svn-r22488] Snapshot version 1.8 release 10 (snap4) 2012-06-24 19:22:53 -05:00
Quincey Koziol
2725ab3daf [svn-r22485] Description:
Merge r22484 from trunk to 1.8 branch:

    Copy the file image test file from the source directory to the build
directory, instead of trying to open the [in-memory] file R/W.

    Also, clean up a few other test files that were left lying around from
other tests.

Tested on:
    MacOSX/64 10.7.4 (amazon) w/debug
    Too minor to require h5committest
2012-06-23 18:40:53 -05:00
Elena Pourmal
f59572a17e [svn-r22483] Maintenance:
- Fixed a typo in return value of the nh5dread_f_c function ( was 1
      instead of 0 on success); fixed the return value to make it consistent
      with other Fortran functions; cleaned the code from debug statements.

Platforms tested: jam with GNU and Intel compilers, fortran 2003 feature.
2012-06-23 18:31:43 -05:00
Allen Byrne
635916cec0 [svn-r22477] Removed subfolder tools from install command, need to correct install template 2012-06-20 09:38:23 -05:00
Allen Byrne
8336239197 [svn-r22476] Change CPACK_PACKAGE_VENDOR to HDF_Group with underscore. 2012-06-20 09:20:46 -05:00