This commit only includes hl/test/test_lite.c, hl/src/H5LT.c, hl/src/H5LTprivate.h. All others are property changes of the merge from the trunk.
Tested on jam, linew, and koala.
Skip parallel diff test "-c non_comparables1.h5 non_comparables2.h5" due
to hanging issue occurring on koala (linux64-LE) intermittently.
Plan to put back when resolved.
The test was related to J7693.
Merged from HDF5 trunk r21413.
Tested:
jam (linux32-LE), koala (linux64-LE)
HDFFV-7693 - h5diff produces different behavior between versions: 1.8.3 and 1.8.6
Description:
There were two issues on this.
One was not displaying all the comparable objects if non-comparable
object/attribute exist and compared before comparables ones. This issue
occurred after 1.8.4 release. This is the issue from user.
The other issue was not displaying all the comparable attributes,
if non-comparable object/attribute exist and compared ahead. This issue
were exist even before 1.8.4 release. So it's possible some attribute
comparison may have not displayed correctly in the past, if non-comparable
data were exist in common object.
Fixed h5diff to display all the comparable object and attribute regardless
of non-comparables.
Merged from HDF5 trunk r21396 and r21397.
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), Cmake (jam, Windows)
HDFFV-5932 - h5repack breaks files with dimension scales
Description:
- Fixed h5repack to update values of references(object and region) of
attributes in h5repack for 1) references, 2) ARRAY of references,
3) VLEN of references, and 4) COMPOUND of references.
- Merged from HDF5 trunk 21393, 21382, 21386, 21389. (support Peter)
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE)
Ported shape same test express test mods from trunk to 1.8 branch.
This was mostly a matter of copying testpar/t_shapesame.c from trunk
to the 1.8 branch, as the root versions of the files were almost
identical.
Tested parallel on Jam only, as changes have been well tested on the
trunk.
t_cache.c - define needed for windows
t_posix_compliant.c - #ifdef around include <unistd.h>
t_shapesame.c - HD prefix needed for stat function
Tested: local linux
tempint = (tempint >> packed_data_offset) & packed_data_mask;
The right shift may cause undefined behavior if PACKED_DATA_OFFSET is
32-bit or more. For every kind of native integers, I changed the code
to make it zero if PACKED_DATA_OFFSET is greater than or equal to the
size of integer.
Tested on jam and on MacOS with CLANG compiler.
HDFFV-2511 - GMQS: h5repack: some tests failed in -q32 AIX
Description:
- Need to be Merged from HDF5 trunk r21283 also, which was missed from previous checkin.
- Previously Merged from HDF5 trunk r21265
- Added macro to handle failure in H5Dread/write when memory allocation
failed inside the library. Add graceful error message when lack of
memory error occurs from HDF5 lib. (XCAO)
Tested:
jam (linux32-LE), koala (linux64-LE)
HDFFV-2511 - GMQS: h5repack: some tests failed in -q32 AIX
Description:
- Merged from HDF5 trunk r21265
- Added macro to handle failure in H5Dread/write when memory allocation
failed inside the library (XCAO)
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE)
them is in the INIT_INTEGER macro definition in dt_arith.c. It complained about line 150 where it tried to subtract 1 from
the negative minimal value of "int", causing it to overflow (or underflow). So I revised the code to avoid it.
Tested on jam and Mac OS Lion with CLANG compiler. But I tested the same change for the trunk with h5committest.
Corrected mismatched function name typo of h5pget_dxpl_mpio_c and h5pfill_value_defined_c.
Tested: Jam.
(Note: Allen has fixed trunk version of these already.)
Work for:
HDFFV-7515 - GMQS: h5unjam - incorrect help page and should display when
no file is given.
and
HDFFV-5941 - h5jam: specifying a user block file with a proper HDF5 magic
number will result in a corrupted HDF5 file.
Description:
- Merged from HDF5 trunk r21236,
- Revised command help pages of h5jam and h5unjam. The descriptions
were not up to date and some were missing. (HDFFV-7515)
- Fixed h5jam not to allow specifying an HDF5 formatted file as input
file for -u (user block file) option, because the original HDF5 file
will not be accessible if allows. (HDFFV-5941)
Tested:
jam (linux32-LE), koala (linux64-LE), heiwa (linuxppc64-BE), tejeda (mac32-LE), linew (solaris-BE), cmake (jam, win)
temp_point->l = (unsigned long long)((i * 100 + j * 1000) * n);
The value can overflow the signed int before being converted to unsigned long long. So I changed it to
temp_point->l = (unsigned long long)((i * 40 + j * 400) * n);
to keep it under the maximal value.
Tested on jam. Simple change.
