Commit Graph

100 Commits

Author SHA1 Message Date
Dana Robinson
1ae6daaa80 Sync with develop 2020-08-01 09:18:18 -07:00
Kimmy Mu
fe75e8f66f Merge pull request #2300 in HDFFV/hdf5 from ~KMU/hdf5:squashed_cast to develop
* commit 'af5c33afabdae2e39bb45eb1b3e9c8366da01145':
  remove unnecessary stuff
  squash cast warning fix
2020-01-27 20:47:06 -06:00
Kimmy Mu
b87a4362a1 Merge pull request #2291 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/uninitialized to develop
* commit '2de0ce0d8ba2fb58fadefc5d718a3c0fedab25c8':
  fix uninitizlized warning
2020-01-27 20:44:23 -06:00
Kimmy Mu
066b874e5a Merge pull request #2094 in HDFFV/hdf5 from ~KMU/hdf5:bugfix/unused to develop
* commit '145ef3ceee20c28a443bd11507c58858bea3f889':
  more cleanup
  change it back
  pick up missing piece
  fix unused related warnings
  removed unused parameter
  more fix and address comments
  remove unsed var,function,macro, etc
2020-01-27 20:39:58 -06:00
Allen Byrne
ba974c031d OESS-29 Update HD prefix mostly 2019-08-24 14:07:33 -05:00
Quincey Koziol
deeb302747 Specify the default VOL connector to use with an environment variable.
This implicitly adds support for changing the VOL connector for command-line
tools or any application linked with the library.

Also, add 'make check-vol' support for all directories, clearing up necessary
issues in testing scripts, etc.
2019-03-09 21:41:38 -06:00
Jordan Henderson
65a820ae89 Fix some collective metadata read issues 2019-02-11 18:31:23 -06:00
Dana Robinson
18e6ec82d0 Squash merge of MDC logging changes. 2018-12-20 20:41:42 -08:00
Dana Robinson
6fccabed2e Missed some function renames in error text. 2018-11-27 11:50:35 -08:00
Dana Robinson
8cf3bfb14b Yanked all MPI-1 calls 2018-11-27 10:31:54 -08:00
Dana Robinson
e962df1591 VOL FEATURE 2018-10-10 08:10:15 -07:00
Allen Byrne
27af9a7922 HD prefix and whitespace 2018-08-28 10:54:54 -05:00
Quincey Koziol
4766d282ff Corrections for parallel I/O & tests. 2018-03-21 00:09:16 -05:00
Quincey Koziol
f38864920d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into merge_func_enter_vol
Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
2018-03-18 18:36:49 -05:00
Quincey Koziol
4a17aff408 Add API context interface and use it throughout the library. 2018-03-15 16:54:30 -05:00
Allen Byrne
205d33f332 Cleanup overuse of include files 2018-02-14 10:08:09 -06:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Quincey Koziol
5df52404bc Misc. small cleanups to sync against incoming page buffering changes. 2017-03-02 06:24:46 -08:00
Quincey Koziol
cf93261099 Correct issues from pull request reviews. 2017-02-28 08:41:57 -08:00
Quincey Koziol
5db402afbb Corrected version of 4b5e05c084:
Fix some more signed -> unsigned value issues with cache data structures,
    also misc. style cleanups.  All to align w/incoming page_buffering changes.
2017-02-27 21:45:55 -08:00
Quincey Koziol
e5fb4191de Revert "Fix some more signed -> unsigned value issues with cache data structures, also"
This reverts commit 4b5e05c084.
2017-02-27 21:23:44 -08:00
Quincey Koziol
4b5e05c084 Fix some more signed -> unsigned value issues with cache data structures, also
misc. style cleanups.  All to align w/incoming page_buffering changes.
2017-02-22 23:21:41 -08:00
Quincey Koziol
5a776edb81 Bring change to use array of metadata cache entry classes for H5C_create
instead of array of class names from cache image branch.
2017-01-27 23:18:47 -08:00
Quincey Koziol
8d4c84eae2 Bring changes to metadata cache "get entry status" call and new
"child serialized / unserialized" messages and support from the cache image
branch.
2017-01-06 11:37:17 -08:00
Quincey Koziol
7568dcaf15 Add "image up to date" flag / parameter to metadata cache entry status calls. 2017-01-06 07:51:40 -08:00
Quincey Koziol
64a339183f Bring SWMR support in to the main development branch. (Finally!) More tests
and the tool and API wrappers will be coming in over the weekend.
2016-12-02 08:07:04 -08:00
Quincey Koziol
460b573a73 Eliminate unnecessary data structure for parallel collective metadata cache I/O 2016-11-27 19:00:12 -06:00
Quincey Koziol
ea4d18c3d9 Remove unnecessary assert. 2016-11-25 17:18:52 -06:00
Quincey Koziol
3b0c2b24da Bring over support for retrying metadata cache entry loads, along with all the
supporting metadata cache callback changes, etc.
2016-11-20 04:24:57 -08:00
Quincey Koziol
eba0ff43c9 Remove 'clear' callback from metadata cache client interface, using the
new 'entry cleaned' notify action innstead.
2016-11-17 17:48:21 -08:00
Quincey Koziol
be27e1ad79 Remove explicit support within the metadata cache for tracked compressed
entries, they are now completely handled in the clients.
2016-11-17 12:58:04 -08:00
Quincey Koziol
d4591ff54d Bring over new 'notify' metadata cache client callback actions for when an
entry is cleaned / dirtied or its [flush dependency] child entry is cleaned /
dirtied.
2016-11-12 14:01:30 -08:00
Quincey Koziol
d3396a7953 [svn-r30075] Description:
Bring object/dataset/group/named datatype features from revise_chunks
branch to trunk.  Also CMake support for h5format_convert and a bunch of
misc. cleanups.

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-06-14 18:07:03 -05:00
Quincey Koziol
7a9e13afdb [svn-r30068] Description:
Bring metadata cache corking to trunk.

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-06-13 12:49:39 -05:00
Mohamad Chaarawi
63c90e5c67 [svn-r29081] - merge in the phdf5_metadata_opt/ branch with the collective metadata optimizations.
- rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library

tested on bb-8 with parallel and serial.
2016-02-10 15:48:34 -05:00
Mohamad Chaarawi
25f271d84b [svn-r29079] rename the coll read requirement function. 2016-02-10 13:19:12 -05:00
Quincey Koziol
c8a6c6030a [svn-r29077] Description:
Normalize against the trunk, in preparation for final merge.

Tested on:
    MacOSX/64 10.11.3 (amazon) w/serial & parallel
    (h5committest not required on this branch)
2016-02-10 12:55:55 -05:00
Mohamad Chaarawi
0461830ee3 [svn-r29059] merge from trunk. 2016-02-07 11:38:55 -05:00
Mohamad Chaarawi
48bebcc39e [svn-r29057] added dxpl type checking when debug mode is enabled (H5_DEBUG_BUILD)
tested on bb-8 with Serial and Parallel, debug and production builds.
2016-02-07 10:37:33 -05:00
Quincey Koziol
06547eb4dd [svn-r28895] Description:
Minor code tweaks and cleanups during review.

Tested on:
    MacOSX/64 10.11.2 (amazon) w/serial & parallel
    (h5comittest not required on this branch)
2016-01-13 23:30:50 -05:00
Mohamad Chaarawi
2824e6bef0 [svn-r28649] - add new API to toggle collective metadata write.
- set default to FALSE
- fix some bugs.
2015-12-14 14:53:31 -05:00
Mohamad Chaarawi
8d131aca15 [svn-r27929] merge from trunk. 2015-10-01 11:12:02 -05:00
Quincey Koziol
1023374492 [svn-r27768] Description:
Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.

    This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.

    Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros.  (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)

    Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    Linux/64 3.10.x (kituo) w/serial & parallel
    Linux/64 2.6.x (ostrich) w/serial
2015-09-13 22:58:59 -05:00
Quincey Koziol
26baf1a805 [svn-r27710] Description:
Bring the "metadata rings" code from its branch (mdc_rings_v2) to the trunk.
(This change will support the page buffering feature)

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest forthcoming)
2015-09-09 01:33:03 -05:00
Mohamad Chaarawi
0286bb12de [svn-r27576] - mark the entry as indepndent when expunged.
- disable the metadata coll hint for smoke checks 1 & 2.
2015-08-25 10:55:57 -05:00
Mohamad Chaarawi
54497d2b53 [svn-r27436] merge from trunk. 2015-07-27 10:39:54 -05:00
Quincey Koziol
ad37464819 [svn-r27296] Description:
Correct error with braces around macro (in production builds), also clean
up a few warnings.

Tested on:
    MacOSX/64 10.10.3 (amazon) w/serial, parallel & production
    Linux/32 2.6 (jam) w/serial & parallel
2015-06-29 15:22:30 -05:00
Quincey Koziol
8e94745298 [svn-r27293] Description:
Split parallel metadata cache code into separate source code modules.

Tested on:
    MacOSX/64 10.10.3 (amazon) w/serial & parallel
    (too minor for h5committest)
2015-06-27 11:45:21 -05:00
Mohamad Chaarawi
f56008e0fe [svn-r27264] some cleanups. 2015-06-22 10:54:43 -05:00
Mohamad Chaarawi
cf07aa6803 [svn-r27261] apply metadata enhancement patch that was based on the mdc 3 branch. 2015-06-21 16:45:01 -05:00