philipp/hdf5
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity
20,587 Commits 73 Branches 125 Tags
574cb4e9425ba1ce8bf0a777caa6cf4e9d57ca4e
Commit Graph

73 Commits

Author SHA1 Message Date
Dana Robinson
1ae6daaa80 Sync with develop 2020-08-01 09:18:18 -07:00
Allen Byrne
2c78a1930b Whitespace updates 2020-05-13 09:15:29 -05:00
Dana Robinson
2b1709f6ff Squashed commit of the token_refactoring branch: 2020-01-18 20:02:16 -08:00
Dana Robinson
957940befb Yanked -Wc++-compat from the flags used to build the C library in both 
the Autotools and CMake.
 2019-12-16 08:13:47 -08:00
Songyu Lu
b234263bbf Changed the name of the temporary directory from 'tmp' to a special name to avoid possible conflicts. 2019-08-14 15:08:46 -05:00
Quincey Koziol
3b594992d6 Add support for GCC9, update warnhist script, and clean up warnings. 2019-07-02 23:43:45 -05:00
Quincey Koziol
d5130bb573 Updated configure & CMake compiler flags for GCC 8.x, along with corresponding 
changes to warnhist script (and some extra improvements for condensing C++
and Java warnings), and fixed a bunch of warnings.
 2019-06-28 09:10:43 -05:00
Dana Robinson
569d051df5 Fixed missing return value checks in VDS tests. 2019-06-26 21:55:11 -07:00
Dana Robinson
8ac60adaa2 Banish enum increment warnings 2019-06-25 23:19:09 -07:00
Neil Fortner
35a8a549f6 Refactor H5S__hyper_project_intersection to operate directly on span 
trees, improving performance and removing the conditionn that the
extents be equal.
 2019-05-31 19:26:56 -05:00
Songyu Lu
c0b13e078e Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~songyulu/hdf5_ray into HDFFV-10658-performance-drop-from-1-8 2019-04-09 18:11:06 -05:00
Vailin Choi
2886cd9e45 HDFFV-10365: Changes as described in the RFC: H5Sencode/H5Sdecode Format Change. 
This also addresses HDFFV-10255: H5Sencode/decode performance issue.
 2019-04-06 16:55:14 -05:00
Songyu Lu
50d9a397ab This commit basically has the following changes: 
1. restored the datatype, dataspace, and LCPL of the dataset for VOL connector back to the properties.
2. splitted external.c and vds.c because they called HDsetenv in the program, instead using shell scripts to set the environment variables.
3. changed H5CX_get_vds_prefix and H5CX_get_ext_file_prefix to use H5P_peek instead of H5P_get.
 2019-04-04 11:03:05 -05:00
Dana Robinson
536a32c59b C and POSIX call cleanup 2019-01-10 17:51:42 -08:00
Hyo-Kyung Lee
863148d1fe fixed typo. 2018-07-10 18:13:44 -05:00
hdftest
b193bc11c9 Revert "Merge pull request #1116 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_10 to develop" 
This reverts commit e9f476dad4, reversing
changes made to 2ff00b1b93.
 2018-06-24 18:04:23 -05:00
M. Scot Breitenfeld
f484649347 Merge branch 'develop' into hdf5_1_10.sync 2018-06-04 14:41:12 -05:00
Vailin Choi
4df595946c Fix for HDFFV-10469: set to latest format for virtual layout encoding. 2018-05-17 11:51:34 -05:00
M. Scot Breitenfeld
278fdfcbdb temporary fix for HDFFV-10469 2018-05-09 16:26:09 -05:00
M. Scot Breitenfeld
b69bd0771e Merge branch 'develop' into hdf5_1_10.sync 2018-05-08 17:17:45 -05:00
Vailin Choi
e6bc326ec0 Fix for HDFFV-10180 Performance issues with H5Oget_info. 2018-04-24 15:10:13 -05:00
Quincey Koziol
f38864920d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into merge_func_enter_vol 
Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
 2018-03-18 18:36:49 -05:00
M. Scot Breitenfeld
8712f3e231 synced with develop 2018-01-05 09:57:48 -06:00
Allen Byrne
bd34c9e455 HDFFV-9724 Corrected files and verified tests 2017-12-28 16:49:50 -06:00
lrknox
86d8a4c267 Revert "Merge pull request #826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop" 
This reverts commit b1223dd653, reversing
changes made to b25f123f5f.
 2017-12-22 12:28:24 -06:00
Allen Byrne
1efe978ae0 Fix library interface commands, add missing JNI 2017-12-21 13:48:49 -06:00
Allen Byrne
94b8a212bf Cleanup comments and if() in TRY blocks 2017-12-20 10:57:41 -06:00
Allen Byrne
8444f018ca HDFFV-9724 Add ENV VAR to vds test 2017-12-19 14:58:17 -06:00
Allen Byrne
95e96246a6 HDFFV-9724 Initial changes and test 2017-12-11 14:44:30 -06:00
Vailin Choi
3d84163ad3 Fix for HDFFV-9947 H5Sencode 
Modifications to fix H5Sencode bug when num points selected is > 2^32.
 2017-11-28 11:11:27 -06:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10 
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
 2017-04-25 16:05:36 -05:00
lrknox
25ec07450a Change copyright headers to replace url referring to file to be removed 
and replace it with new url for COPYING file.

Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
 2017-04-14 11:54:16 -05:00
Allen Byrne
71fa3dc480 Fix alignment 2017-03-08 11:51:17 -06:00
Allen Byrne
12b87f0f84 Fix vds tests 
java wrong call
vds test - missing checks and if content
 2017-03-07 10:06:38 -06:00
Quincey Koziol
bb19817c9f [svn-r30189] Description: 
Clean up more warnings: drop the warning count from ~1310 down to ~940,
with only 31 types of warnings in 148 files (down from 38 types in 167 files).

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial & parallel
    (h5committest forthcoming)
 2016-07-17 19:18:42 -05:00
Allen Byrne
2f1b517021 [svn-r29884] VDS correction for get_space_status, with test change. 
Add new files for repack tests.
Add repack tests for VDS files.
 2016-05-04 11:38:08 -05:00
Dana Robinson
0dd0ffd5c1 [svn-r29421] Fix for HDFFV-9516. 
Corrects a problem where H5Dget_access_plist() returns a dapl that
does not contain all dapl fields.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
 2016-03-15 12:43:34 -05:00
Dana Robinson
7822924da9 [svn-r28573] Merge of r28109 from revise_chunks. Minor change to test/vds.c. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial only
 2015-12-10 22:18:03 -05:00
Quincey Koziol
0695d6366a [svn-r27835] Description: 
Sync w/trunk.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
 2015-09-20 21:18:45 -05:00
Neil Fortner
c839ed3383 [svn-r27646] Add version number to VDS global heap object encoding. 
Fix handling of layout version number.
Other minor fixes/cleanup.
NOTE: This commit changes the file format for VDS, all files must be
re-generated.

Tested: ummon
 2015-09-01 08:03:33 -05:00
Neil Fortner
32bf83f1cf [svn-r27546] Add tests for H5O__dset_bh_info (H5Oget_info) and unlimited selections in a 
region reference.

Tested: ummon
 2015-08-21 14:57:29 -05:00
Neil Fortner
1821b64d49 [svn-r27543] Add tests to cover remaining code coverage assertions in H5Shyper.c. 
Add more tests for unlimited selections.
Fix bug related to empty unlimited source dataset.

Tested: ummon
 2015-08-20 17:18:52 -05:00
Neil Fortner
e3bea91686 [svn-r27538] Add tests to cover remaining code coverage assertions in src directory except 
for those in H5Doh.c and H5Shyper.c.

Tested: ummon
 2015-08-20 11:38:05 -05:00
Neil Fortner
6909d2033f [svn-r27527] Add tests to hit code coverage assertions in H5Olayout.c. 
Fix issue in VDS delete routine.

Tested: ummon
 2015-08-19 11:21:27 -05:00
Neil Fortner
69e2f53edb [svn-r27520] Add new test for all 3 selection types in the same VDS. 
Minor cleanup in the tests.

Tested: ummon
 2015-08-18 15:45:46 -05:00
Neil Fortner
cefda2ef0c [svn-r27505] Add support for H5Dset_extent for VDS. 
Add tests for this.
Other bug fixes/cleanup

Tested: Kubuntu 64 (home computer)
 2015-08-13 21:55:15 -05:00
Neil Fortner
1ba3706640 [svn-r27498] Add support for I/O after reopening a VDS with unlimited and/or printf mappings 
without calling H5Dget_space first.
Add tests for this.
Other minor fixes/cleanup.

Tested: ummon
 2015-08-12 13:19:48 -05:00
Neil Fortner
0c4ec00cba [svn-r27481] Add support for offset selections passed to H5Pset_virtual. 
Add test for this.

Tested: ummon
 2015-08-07 15:06:56 -05:00
Neil Fortner
98f947ceae [svn-r27479] Add checking for invalid inputs to H5Dset_virtual: point selections, incorrect 
numbers of elements selected, incorrect "slice" through limited dimensions,
incorrect number of printf substitutions.
Patch source selection space extent with bounds of selection if extent is
unknown before returning via H5Pget_virtual_srcspace.
Write updated VDS dataspace to file when it changes due to unlimited selections.
Other minor fixes/cleanup.

Tested: ummon
 2015-08-07 11:15:39 -05:00
Neil Fortner
49076d6d22 [svn-r27425] Implement support for H5Pequal with VDS properties. 
Testing for H5Pequal with VDS.

Tested: ummon
 2015-07-22 16:41:18 -05:00