Commit Graph

1666 Commits

Author SHA1 Message Date
Elena Pourmal
8394d07bb1 [svn-r15060] Maintenance: File space identifier was not closed causing memory growth; fixed
Platforms tested: kagiso (minor fix)
2008-05-21 14:21:23 -05:00
Scot Breitenfeld
fcf8a9a2cb [svn-r15054] Purpose:
Made reporting of the test status  global by handling the output
via a module. Cleaned-up output to the terminal.


Description:
Put writing the test status as a call to a subroutine
instead of on a per account basis. 
Added the dependency of compiling in the correct order
in the Makefiles for use of the Module.
2008-05-21 10:02:24 -05:00
Albert Cheng
ca94c839d5 [svn-r15036] Bug fix.
Description:
The fortran Makefile.am used HDF_FORTRAN to indicate it is part of the
Fortran API source so that conclude.am will give fortran api prefix in the
test output.  The symbox HDF_FORTRAN is also used in configure for a different
purpose (indicated --enable-fortran). They conflicted.
Similar problem for the symbol HDF_CXX.

Solution:
Changed all the involved Makefile.am to use "FORTRAN_API" instead. It is
a more appropriate name.  Same for CXX_API.

Along the way, discovered that the Makefile.am of hl/fortran/test and
hl/cxx/test did not have those symbols at all.  Added them in.

Platform tested:
Kagiso only. It is a trivia change.
2008-05-19 00:06:51 -05:00
Elena Pourmal
12c5e315c5 [svn-r15030] Maintenance: Fixed a comment 2008-05-17 22:06:48 -05:00
Elena Pourmal
35261670d8 [svn-r15026] Maintenance: Fixed a typo in the fortran h5tget(set)_fields_f subroutines.
Platfomrs tested: kagiso with GNU compilers (this is bug 1046, I am not closing it since there is
                  no tests for those routines yet)
2008-05-17 21:56:31 -05:00
Scot Breitenfeld
5c122eeb8b [svn-r15025] Purpose:
Cleaned up unused code (i.e. commented out) and removed extraneous output to standard out.

Tested:
N/A - No critical executable source lines were modified, only comments and write statements.
2008-05-16 15:46:10 -05:00
Scot Breitenfeld
89276c0f7e [svn-r15010] Purpose:
Fixed validation failure when compiled with -i8 and the g95 compiler

Description:
 Fixed "off by one error" when converting C character buffer 
into fortran character buffer in h5aget_name_by_idx_c
2008-05-15 15:10:41 -05:00
Mike McGreevy
389cc309c5 [svn-r15007] Purpose: configure cleanup
Description: cleaning up configure related to removal of --disable-hsizet
             flag, which we no longer support.

Tested: kagiso
2008-05-15 11:42:03 -05:00
Albert Cheng
7b7f10a444 [svn-r15003] Purpose:
Improvement.

Description:
src/libhdf5.settings was the initial configure summary and is installed.
Then configure is changed to dump a summary of the configure settings to
the output and also append it to src/libhdf5.settings.  That created
two different output formats and duplicated information.  This is the
initial attempt to clean up this confusion and unify the output format.

It is decided to use the src/libhdf5.settings template as the unified means.
This requires more macros symbols be defined. The following symbols are
all related to generating the src/libhdf5.settings file.

AC_SUBST(EXTERNAL_FILTERS)
AC_SUBST(MPE) MPE=no
AC_SUBST(STATIC_EXEC) STATIC_EXEC=no
AC_SUBST(HDF_FORTRAN) HDF_FORTRAN=no
AC_SUBST(FC) HDF_FORTRAN=no
AC_SUBST(HDF_CXX) HDF_CXX=no
AC_SUBST(CXX) HDF_CXX=no
AC_SUBST(HDF5_HL) HDF5_HL=yes
AC_SUBST(GPFS) GPFS=no
AC_SUBST(LINUX_LFS) LINUX_LFS=no
AC_SUBST(INSTRUMENT) INSTRUMENT=no
AC_SUBST(CODESTACK) CODESTACK=no
AC_SUBST(HAVE_DMALLOC) HAVE_DMALLOC=no
AC_SUBST(DIRECT_VFD) DIRECT_VFD=no
AC_SUBST(THREADSAFE) THREADSAFE=no
AC_SUBST(STATIC_SHARED)
AC_SUBST(enable_shared)
AC_SUBST(enable_static)
AC_SUBST(UNAME_INFO) UNAME_INFO=`uname -a`

The src/libhdf5.settings.in has CONDITIONAL's added to it too.  The
untrue conditions turned into a "#" and these lines are cleaned by the 
post processing script.

Platform tested:
h5committest on kagiso, smirom and linew.
2008-05-15 00:12:00 -05:00
Scot Breitenfeld
c57a9ec023 [svn-r15002] Purpose:
Made all subroutine names lowercase.
2008-05-14 15:07:31 -05:00
Scot Breitenfeld
45a23603ed [svn-r14997] Purpose:
Cleaned up get_name_by_idx_f test that uses the newest API.
2008-05-14 14:13:32 -05:00
Scot Breitenfeld
33483eafdc [svn-r14996] Purpose:
Updated the call using the new interface for the get_name_by_idx_f routine
2008-05-14 13:58:44 -05:00
Scot Breitenfeld
a30c706f79 [svn-r14995] Purpose:
Changed the interface for the get_name_by_idx_f routine

Description:
Changed the 'size' which is the correct size of the returned
buffer to be an optional parameter.
2008-05-14 13:50:15 -05:00
Elena Pourmal
ec4ae5213b [svn-r14991] Maintenance: Fixed some bugs discovered by daily testing and by manual testing using -i8 flag
Platforms tested: linew (as for daily tests), icc and pgf90 with -i8 on kagiso; g95 has the problem
                  with -i8 (will be looking into the problem)
2008-05-13 13:23:35 -05:00
Scot Breitenfeld
523bfc1c76 [svn-r14987] Purpose:
Fixed the validation problem with H5Aget_info_f

Desciption:

Recast the interger type passed into 'validate' subroutine.
2008-05-13 11:10:19 -05:00
Scot Breitenfeld
cc5f029ada [svn-r14979] Purpose:
Added additional verification test for H5Aget_info_f
2008-05-12 15:24:53 -05:00
Scott Wegner
2fd80deb4d [svn-r14975] Purpose: Add Windows fixes for new Fortran code.
Description:
There were a number of small tweaks we needed to make to add the new fortran_1_8 code on Windows.  We create new project files, add new source to them, add the test to our test suite, and fix a few typos in the Windows-specific source code.

Tested:
VS2005 on WinXP
2008-05-12 13:14:12 -05:00
Scot Breitenfeld
90205aa02c [svn-r14972] Purpose:
Corrected the way the total number of errors are summed up.
2008-05-12 12:48:23 -05:00
Scot Breitenfeld
6614c194d5 [svn-r14971] Purpose:
Added a test for H5Tget_create_plist_f
2008-05-12 12:46:12 -05:00
Scot Breitenfeld
2e1c8e196d [svn-r14963] Removed dependency on unused routines for the fortranlib_test_1_8
test program.
2008-05-09 15:51:51 -05:00
Scot Breitenfeld
9c6ec1afa0 [svn-r14962] Removed dependency on unused routines for the fortranlib_test_1_8
test program.
2008-05-09 15:47:46 -05:00
Scot Breitenfeld
5e3880e42d [svn-r14961] Fixed DEC$attributes for windows 2008-05-09 15:24:59 -05:00
Elena Pourmal
44b6a4de8f [svn-r14960] Maintenance: IRIX compiler exposed a problem in one of the new APIs. Fixed.
Platforms tested: kagiso and UCAR IRIX machine.
2008-05-09 14:06:12 -05:00
Scot Breitenfeld
c9d5c195cd [svn-r14958] Cosmetic changes and fixed integer type mismatch in C routine wrapper. 2008-05-09 11:13:24 -05:00
Scot Breitenfeld
b7efe1e536 [svn-r14955] Purpose:
* test passing integer constant to subroutine

Description:

  ! -- CHECK PASSING AN INTEGER CONSTANT IN DIFFERENT FORMS --

  ! 1) call by passing an integer with the _hsize_t declaration 
  
  ! 2) call by passing an integer with the INT(,hsize_t) declaration
  
  ! 3) call by passing a variable with the attribute hsize_t
2008-05-08 12:04:11 -05:00
Scot Breitenfeld
7771660c28 [svn-r14954] re-instated the test_attr_dense_open routine for debugging 2008-05-08 10:59:38 -05:00
Elena Pourmal
908f3a8c8d [svn-r14953] Maintenance: Fixed some minor bugs exposed by the Intel compiler on tungsten.
Platforms tested: tungsten is still configuring.
2008-05-08 10:53:10 -05:00
Elena Pourmal
0a896c59a8 [svn-r14941] Maintenance: Cleaned up more test code, fixed more bugs in the test and source codes.
This check-in should address Fortran failures on liberty and smirom.

Platforms tested: kagiso with Intel, smirom with g95 -fPIC, liberty with gfortran42
2008-05-06 13:01:59 -05:00
Mike McGreevy
5bd2405c11 [svn-r14933] Purpose: Updating HDF5 to use automake 1.10.1 and libtool 2.2.2
Description: Applying update to autotools that was applied to 1.8 a couple
             of weeks ago to the trunk.

             Updated bin/reconfigure script to reflect the new versions of 
             libtool and automake in the /home1/packages/ directory.

             Rearranged configure.in script. When using libtool 2.2.2, the
             libtool script doesn't generate until later in the configuration
             process, so I had to move a test that parsed through the libtool
             script to a point after where it was actually being generated.

             Ran libtoolize on the project, and ran bin/reconfigure to
             regenerate configure and Makefile.in's throughout.

Tested:      kagiso, smirom, linew (h5committest)
2008-05-05 13:35:55 -05:00
Elena Pourmal
e182fc3bb8 [svn-r14930] Maintenance: Fixed more bugs/typos and enabled tests that were failing previously on linew.
Currently only one test (dense attributes) is failing. It looks like C library problem and we
             have a similar bug report in Bugzilla: when dense storage is used, attributes are not written
             to the file; somehow similar C test doesn't expose the problem while Fortran test does.

Platforms tested: linew, kagiso with g95 and PGI
2008-05-04 20:00:37 -05:00
Elena Pourmal
f6069ad57e [svn-r14928] Maintenance: Cleaned up the code to make it compile on smirom with the g95 compiler
Platforms tested: kagiso with PGI compilers, linew, smirom with GCC and g95 compilers;
                  some tests and function calls are commented out with !EP string; we will be
                  working on it.
2008-05-04 11:48:07 -05:00
Elena Pourmal
31b3c34908 [svn-r14927] Maintenance: Enabled all tests that pass on linew. Disabled tests are commented with !!EP for now. 2008-05-04 00:24:04 -05:00
Elena Pourmal
c08112a0c0 [svn-r14926] Maintenance: More cleanup in the test output and enabled another test for linew before daily tests start. 2008-05-03 23:54:06 -05:00
Elena Pourmal
f162bead9a [svn-r14925] Maintenance: Cleaned up reporting of the tests nd enable some tests that pass on linew. 2008-05-03 23:44:26 -05:00
Elena Pourmal
102bd35402 [svn-r14924] Commented out new tests since they failcompletely on linew while passing on smirom and kagiso. 2008-05-03 23:28:05 -05:00
Elena Pourmal
dcad778b42 [svn-r14923] Maintenance: This check-in merges changes from the fortran_1_8 branch back into the trunk (up to revision 14921)
Platforms tested: kagiso with g95 and Intel compilers; more testing will be done after checking in a fresh
                  copy from the trunk. New code itself was tested with all Fortran compilers available at THG
2008-05-03 18:39:37 -05:00
Scot Breitenfeld
aec106e324 [svn-r14903] Undoing change committed in r14902. 2008-04-30 14:51:13 -05:00
Scot Breitenfeld
5773fd34bc [svn-r14902] Merged fortran_1_8 branch changes r14505:14901 into the trunk. New fortran wrappers added. 2008-04-30 14:23:26 -05:00
Quincey Koziol
e622f33515 [svn-r14420] Description:
Correct the prototype for H5Sselect_elements() to take an 'hsize_t *' for
the coordinates, instead of 'hsize_t **'.

Tested on:
    Mac OS X/32 10.5.1 (amazon)
2008-01-15 16:10:42 -05:00
Quincey Koziol
d6e767c21d [svn-r14402] Description:
Add work-around to allow reading files that were produced with a buggy
earlier version of the library, which could create objects with the wrong
object header message count.  There is now a configure flag
"--enable-strict-format-checks" which triggers a failure on reading a file
with this sort of corruption (when enabled) and allows the object to be read
(when disabled).  The default value for the "strict-format-checks" flag is
yes when the "debug" flag is enabled and no when the "debug" flag is disabled.

	Note that if strict format checks are disabled (allowing objects with
this particular kind of corruption to be read) and the file is opened with
write access, the library will re-write the object header for the corrupt
object with the correct # of object header messages.

	This closes bugzilla bug #1010.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2008-01-13 00:37:00 -05:00
Elena Pourmal
98fb2db938 [svn-r14340] Maintenance for VMS system:
Skip one of the tests in flush2.c since it looks like VMS system
		flsuhes the file anyway (like on Winodws with DLLs)

		Renamed files family*.h5 that are used in backward compatibility
		testing to have only one '.' in a file name, otherwise VMS system
		becomes confused and test fails.

		Cleaned up the only test (Fortran multi-file test) that is failing on 
		VMS (C counterpart passesa).

		Added new script to facilitate the build process on VMS
		Updated MANIFEST

PLatforms tested: VMS server, kagiso and linew (minor changes)
2007-12-13 13:17:02 -05:00
Albert Cheng
b4f4670c81 [svn-r14270] Description:
Removed the stream-vfd from the basic library code.
(The stream-vfd source files are not removed yet but the MANIFEST has been
updated to NOT release those stream-vfd source files.)

Platforms tested:
Kagiso and smirom.
Then test the release tar ball in kagiso.
2007-11-19 22:43:58 -05:00
Quincey Koziol
24f2310b12 [svn-r14229] Description:
Change H5O[gs]et_comment to H5O[gs]et_comment_by_name and re-add simpler
forms of H5O[gs]et_comment.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
        Linux/64-ia64 2.4 (tg-login3) w/parallel, w/FORTRAN, in production mode
2007-11-01 13:24:08 -05:00
Quincey Koziol
e15bdb05e6 [svn-r14225] Description:
Change H5Oget_info -> H5Oget_info_by_name and re-add H5Oget_info in a
simpler form for querying a particular object, to align with other new API
routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-31 08:13:40 -05:00
Quincey Koziol
c136b81140 [svn-r14223] Description:
Change existing H5Gget_info -> H5Gget_info_by_name and add new version
of H5Gget_info, with simpler parameters, to better match new API routines.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 16:57:50 -05:00
Quincey Koziol
f854744668 [svn-r14222] Description:
Change H5Adelete2 -> H5Adelete_by_name and un-deprecate H5Adelete1 back
to H5Adelete, for better consistency with new other API routiens.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 15:37:39 -05:00
Quincey Koziol
0e06a92d0e [svn-r14218] Description:
Changed H5Acreate2 -> H5Acreate_by_name, to be more consistent with
other new API routines.

	Re-added simpler form of H5Acreate2, which creates attributes directly
on an object.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 13:13:48 -05:00
Quincey Koziol
dbff4af21c [svn-r14217] Description:
Change H5Aopen -> H5Aopen_by_name, in order to be more consistent with
other new API routines.

	Re-add H5Aopen as a simpler routine, to open attributes on a particular
object.  (Much like the old H5Aopen_name routine).

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-30 11:07:20 -05:00
Quincey Koziol
a5984f59f7 [svn-r14212] Description:
Make H5Tarray_create() and H5Tget_array_dims() versioned, and drop the
"perm" parameter from the '2' versions.

	Shift internal library usage to '2' versions.

	Add simple regression tests for '1' versions.

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-18 17:02:19 -05:00
Quincey Koziol
b0eb42058c [svn-r14208] Description:
Make H5Pget_filter_by_id() API versioned and switch internal usage
to H5Pget_filter_by_id2().

	Add simple regression test for H5Pget_filter_by_id1().

Tested on:
        FreeBSD/32 6.2 (duty) in debug mode
        FreeBSD/64 6.2 (liberty) w/C++ & FORTRAN, in debug mode
        Linux/32 2.6 (kagiso) w/PGI compilers, w/C++ & FORTRAN, w/threadsafe,
                                in debug mode
        Linux/64-amd64 2.6 (smirom) w/default API=1.6.x, w/C++ & FORTRAN,
                                in production mode
        Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
                                in production mode
        Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
                                w/szip filter, in production mode
        Mac OS X/32 10.4.10 (amazon) in debug mode
2007-10-18 11:10:46 -05:00