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573 Commits

Author SHA1 Message Date
Dana Robinson
1ae6daaa80 Sync with develop 2020-08-01 09:18:18 -07:00
Allen Byrne
415647d63a Whitespace cleanup 2020-05-12 15:45:22 -05:00
Allen Byrne
6108186feb TRILAB-192 - merge changes from develop 
Single source, config files, for warnings for both autotools and CMake.
Update CMake libraries, tools, tests to use correct flags.
 2020-04-07 09:47:29 -05:00
Allen Byrne
9ed096fb39 Merge changes from develop mostly cmake 3.12 minimum version 2020-02-23 11:55:47 -06:00
M. Scot Breitenfeld
08737e596d HDFFV-11018 Add Fortran H5F_LIBVER_V*_F definitions 
Added
------
New Definitions:

  INTEGER :: H5F_LIBVER_ERROR_F
  INTEGER :: H5F_LIBVER_NBOUNDS_F
  INTEGER :: H5F_LIBVER_V18_F
  INTEGER :: H5F_LIBVER_V110_F
  INTEGER :: H5F_LIBVER_V112_F

New API:
  h5pget_libver_bounds_f(fapl_id, low, high, hdferr)

Removed:
  call to C wrapper h5pset_libver_bounds_c in h5pset_libver_bounds_f
 2020-02-11 12:10:56 -06:00
Allen Byrne
7541b6abb9 HDFFV-11012 fix fortran include properties 2020-02-05 09:40:42 -06:00
Jordan Henderson
edec1f017d Introduce new H5VL _by_value routines 2020-01-29 16:59:41 -06:00
Allen Byrne
6bae11bb5b Improved CMake options for tests 2020-01-19 07:53:46 -06:00
Dana Robinson
2b1709f6ff Squashed commit of the token_refactoring branch: 2020-01-18 20:02:16 -08:00
Quincey Koziol
9a155a538b Cherry pick of 0225e6d596 2020-01-04 10:05:22 -06:00
Dana Robinson
bb8904a75e Merge pull request #1826 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:develop_minor_pr to develop 
* commit '4227b8948d7091205b4f8dc1271d7dcae01bb0fb':
  Reverts the removal of config/conclude_fc.am while keeping the changes to config/gnu-fflags.
  Fixed a couple of typos.
 2019-08-01 09:40:01 -05:00
Dana Robinson
4227b8948d Reverts the removal of config/conclude_fc.am while keeping 
the changes to config/gnu-fflags.
 2019-07-31 22:51:53 -05:00
Allen Byrne
4df595c22d Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'd169391529f253a9903b8e6cacf38c59ceefab07':
  Parallel Fortran tests now use the MPI module instead of including mpif.h.
  First stab at gfortran versions. Tested on gfortran 7-9 so far.
  Moved the -std=f2008 option to gfortran 9 for now.
  Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to   investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated   into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
 2019-07-29 16:24:15 -05:00
Dana Robinson
d169391529 Merge pull request #1808 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:gnu-flags-work to develop 
* commit '7d291d059da6287f769951c4854c566da0b93ce8':
  Parallel Fortran tests now use the MPI module instead of including mpif.h.
  First stab at gfortran versions. Tested on gfortran 7-9 so far.
  Moved the -std=f2008 option to gfortran 9 for now.
  Updated gfortran options. * Removed conclude_fc.am, which was causing verbose builds. Need to   investigate more, though. * Added gfortran 9 warnings and flags. This will need to be separated   into other version blocks based on when the options first appeared. * The standard is now explicitly set at 2008.
 2019-07-29 16:13:24 -05:00
Allen Byrne
6a932198aa HDFFV-10529 Update CMake tests to use test fixtures 2019-07-23 16:24:56 -05:00
Allen Byrne
f724e86727 HDFFV-10845 use of TARGETFILE disables auto emulator 2019-07-17 11:58:04 -05:00
Allen Byrne
ac5680ce8d HDFFV-10845 add_custom_command requires emulator 2019-07-17 11:58:04 -05:00
Dana Robinson
8bd2c81cd5 Updated gfortran options. 
* Removed conclude_fc.am, which was causing verbose builds. Need to
  investigate more, though.
* Added gfortran 9 warnings and flags. This will need to be separated
  into other version blocks based on when the options first appeared.
* The standard is now explicitly set at 2008.
 2019-07-17 01:23:44 -07:00
Quincey Koziol
d5130bb573 Updated configure & CMake compiler flags for GCC 8.x, along with corresponding 
changes to warnhist script (and some extra improvements for condensing C++
and Java warnings), and fixed a bunch of warnings.
 2019-06-28 09:10:43 -05:00
Allen Byrne
21e147da71 Fix fortran test and test library linking 2019-06-23 13:52:30 -05:00
Quincey Koziol
1ccbdfee58 Add support for GCC 7.x warnings, update warnhist script to account for them, 
clean up warnings.
 2019-06-21 10:05:34 -05:00
Allen Byrne
11f83e55ec Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'b9ec6a6400a556b1250c249e158c4fffafccd550':
  fixed pass_through vol
 2019-06-19 13:55:34 -05:00
Scot Breitenfeld
b9ec6a6400 Merge pull request #1746 in HDFFV/hdf5 from ~BRTNFLD/hdf5_msb:develop to develop 
* commit 'a67c578e4b9275fa12b427b6e13021536838a448':
  fixed pass_through vol
 2019-06-19 13:52:21 -05:00
Allen Byrne
562cd7f3ab Cleanup possible CMake target conflicts 2019-06-19 10:35:55 -05:00
M. Scot Breitenfeld
a67c578e4b fixed pass_through vol 2019-06-18 11:39:21 -05:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets 
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
 2019-06-18 07:46:25 -05:00
M. Scot Breitenfeld
a0f9e97769 fixed linked library for testing 2019-06-14 14:30:48 -05:00
M. Scot Breitenfeld
79916da303 added missing MOD dependency 2019-06-14 12:08:59 -05:00
M. Scot Breitenfeld
0f947f953d added missing MOD dependency 2019-06-14 09:39:18 -05:00
M. Scot Breitenfeld
d754a86c24 updated static vol_connector build 2019-06-13 16:23:55 -05:00
M. Scot Breitenfeld
022a3f97b1 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2019-06-13 15:48:01 -05:00
M. Scot Breitenfeld
b08685f503 updated static vol_connector build 2019-06-13 15:47:55 -05:00
M. Scot Breitenfeld
d1b43964b3 Merge branch 'develop' of ssh://bitbucket.hdfgroup.org:7999/~brtnfld/hdf5_msb into develop 2019-06-13 10:41:39 -05:00
M. Scot Breitenfeld
92bebb782e fixed dependencies 2019-06-13 10:41:31 -05:00
M. Scot Breitenfeld
e5d1da0224 fixed invalid pointer 2019-06-13 10:31:14 -05:00
M. Scot Breitenfeld
c348d7d606 removed unregistering native vol 2019-06-13 09:56:50 -05:00
M. Scot Breitenfeld
46a62130fa fix for cycle dependency 2019-06-13 09:23:12 -05:00
M. Scot Breitenfeld
0742c15fca makefile clean-up 2019-06-12 09:21:59 -05:00
M. Scot Breitenfeld
893641990a move the vol_info to an optional parameter 2019-06-11 14:28:10 -05:00
M. Scot Breitenfeld
2c79243111 added H5Pset_vol 2019-05-22 14:09:17 -05:00
M. Scot Breitenfeld
4673a34825 added vol connector 2019-05-16 16:22:05 -05:00
M. Scot Breitenfeld
5e3dfa8bbe added test for vol_connector 2019-05-16 15:33:16 -05:00
M. Scot Breitenfeld
1f505e5ab2 removed H5VL constants 2019-05-16 15:20:32 -05:00
M. Scot Breitenfeld
32c4900e89 removed VOLL NULL connector and replaced it with native VOL 2019-05-16 15:05:12 -05:00
M. Scot Breitenfeld
1d6641ee3a added connector_name test 2019-04-24 15:17:10 -05:00
M. Scot Breitenfeld
fc769f425f added missing files 2019-04-24 13:59:26 -05:00
M. Scot Breitenfeld
7dd53873f7 Merge branch 'develop' into H10621 2019-04-24 12:57:30 -05:00
Quincey Koziol
d7e1464058 Add C++, Java, and FORTRAN wrappers and tests for H5Fget_fileno 2019-04-13 22:58:16 -05:00
Vailin Choi
2886cd9e45 HDFFV-10365: Changes as described in the RFC: H5Sencode/H5Sdecode Format Change. 
This also addresses HDFFV-10255: H5Sencode/decode performance issue.
 2019-04-06 16:55:14 -05:00
M. Scot Breitenfeld
7c927a3590 added more tests 2019-03-11 11:32:49 -05:00