Bring r18837 from trunk to 1.8 branch:
Remove the size parameter from H5[A]C_unprotect() and the
H5[A]C__SIZE_CHANGED_FLAG, switching all clients & tests over to using
H5[A]C_resize_entry appropriately.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Mac OS X/32 10.6.3 (amazon) in debug mode
Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
(h5committested on trunk)
Correct function enter macro and add 'done' label, for routine that is
only invoked when configured with --enable-debug=all.
Tested on:
Mac OS X/32 10.6.3 (amazon) w/debug & production
(too minor to require h5committest)
any more. Changed algorithm of creating mask which now sits
at the least significant bits. Display data by down shift
first and then mask it for display. Changed the variable
names to reflect the new purpose better.
Tested: AlbertPax (linux)
Fixed a bug (1822) in the H5DSdetach_scale function when 0 bytes
were allocated after the last reference to a dim. scale
was removed from the list of references in a VL element of the
DIMENSION_LIST attribute; modified the function to comply
with the Spec: DIMENSION_LIST attribute is deleted now when no
dimension scales left attached.
Platforms tested: jam with electric fence, amani amd linew
Add bug fixes for Tools.
Description:
Added list from bugzilla:
1726 - NPOESS: h5repack loses attributes for datasets of type H5T_REFERENCE
1814 - NPOESS: h5repack doesn't handle references to the groups as an
element of a dataset
1817 - h5copy fail to copy dangling link by specifying link path directly
1793 - h5ls on a non-existent file gives 0 return code
Tested:
not need, just text update.
Program failued in FreeBSD and Windows machines because uint is a local
backward compatibility extension of Linux. Changed them to the proper
"unsigned int".
Tested: FreeBSD (liberty,duty), h5committested.
Fixed file cleanup during make distclean / make check.
Description:
The h5jam Makefile and the h5importtestutil.sh script both included cleanup
steps that removed "*.txt" from the directory. This resulted in the new
CMake specific configuration file, CMakeLists.txt, getting blown away by
make distclean (for h5jam) and make check (for h5import).
I've removed the *.txt from the h5jam Makefile as the directory looks to be
getting cleaned appropriately without it, and I've modified the h5import
script h5importtestutil.sh to point to the specific .txt files to clean.
Tested:
jam
Update RELEASE.txt
Description:
Remove outdated known issue (should have been removed
from 1.8.4, whoops) from RELEASE.txt
Tested:
doc only, none needed.
Fix memory leaks
Description
Added a routine to free memory which addresses a memory leak
when variable length strings are used as fill values.
Also added some minor tweaks to the H5I 'save ID structures' mechanic.
Tested:
h5committest and valgrind (on jam/amani) to confirm freed memory.
Added note about use of volatile for variables.
Added blurb to release notes about fixing strict-aliasing problems.
Tested on:
None - trivial change to comment.
Install packed-bits feature for h5dump.
tools/h5dump/h5dump.c:
Added lots of error checking into parse_mask_list() to catch and
flagged packed-bits argument errors. For now, the packed bits
are limited to 1 byte (8 bits) range.
tools/h5dump/testh5dump.sh.in
Added 10 new packed-bits test to verify normal operation and argument
error detection.
tools/lib/h5tools.h:
tools/lib/h5tools_str.c:
tools/lib/h5tools.c:
Only name changes of the packed-bit global variables to reflect
the nature of the variable better, IMO.
Tested: albertPax (linux)
------------------------------------------------------------------------
Install packed-bits feature for h5dump.
Added gent_packedbits() to generate the HDF5 test data
file, packedbits.h5, for packed-bit feature test.
Tested: albertPax (linux)
------------------------------------------------------------------------
Install packed-bits feature for h5dump.
testfiles/packedbits.h5:
New HDF5 test data file. Generated by h5dump/h5dumpgentest.
testfiles/tpbitsLengthPositive.ddl:
testfiles/tpbitsMaxExceeded.ddl:
testfiles/tpbitsSigned.ddl:
testfiles/tpbitsOffsetNegative.ddl:
testfiles/tpbitsUnsigned.ddl:
testfiles/tpbitsMax.ddl:
testfiles/tpbitsIncomplete.ddl:
testfiles/tpbitsOverlapped.ddl:
testfiles/tpbitsLengthExceeded.ddl:
testfiles/tpbitsOffsetExceeded.ddl:
Expected output files created to test various
components of the packed-bits feature.
testfiles/tpackedbits2.ddl:
testfiles/tpackedbits.ddl:
Previous output files no longer used.
Tested: albertPax (linux)
Correct error in H5C_resize_entry() where protected entry sizes were
not updated if the entry being resized was both pinned and protected.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
(h5committested on trunk)
Bring r18768 from trunk to 1.8 branch:
Correct a mis-merged patch when marking an entry dirty.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
(h5committested on trunk)
