Valgrind fixed by checking for prefix_len of 0

This commit is contained in:
Allen Byrne
2018-05-23 12:07:56 -05:00
parent 2b0fb7e3f1
commit 1821f8219d

View File

@@ -104,7 +104,7 @@ H5FL_DEFINE(H5F_t);
H5FL_DEFINE(H5F_file_t);
/*-------------------------------------------------------------------------
* Function: H5F_get_access_plist
*
@@ -218,7 +218,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_get_access_plist() */
/*-------------------------------------------------------------------------
* Function: H5F_get_obj_count
*
@@ -246,7 +246,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_get_obj_count() */
/*-------------------------------------------------------------------------
* Function: H5F_get_obj_ids
*
@@ -273,7 +273,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_get_obj_ids() */
/*---------------------------------------------------------------------------
* Function: H5F_get_objects
*
@@ -375,7 +375,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_get_objects() */
/*-------------------------------------------------------------------------
* Function: H5F_get_objects_cb
*
@@ -484,7 +484,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_get_objects_cb() */
/*--------------------------------------------------------------------------
* Function: H5F__build_name
*
@@ -510,13 +510,13 @@ H5F__build_name(const char *prefix, const char *file_name, char **full_name/*out
/* Compose the full file name */
HDsnprintf(*full_name, (prefix_len + fname_len + 2), "%s%s%s", prefix,
(H5_CHECK_DELIMITER(prefix[prefix_len - 1]) ? "" : H5_DIR_SEPS), file_name);
((prefix_len == 0 || H5_CHECK_DELIMITER(prefix[prefix_len - 1])) ? "" : H5_DIR_SEPS), file_name);
done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5F__build_name() */
/*--------------------------------------------------------------------------
* Function: H5F__getenv_prefix_name
*
@@ -553,7 +553,7 @@ H5F__getenv_prefix_name(char **env_prefix/*in,out*/)
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__getenv_prefix_name() */
/*-------------------------------------------------------------------------
* Function: H5F_prefix_open_file
*
@@ -775,7 +775,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5F_prefix_open_file() */
/*-------------------------------------------------------------------------
* Function: H5F__is_hdf5
*
@@ -816,7 +816,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* end H5F__is_hdf5() */
/*-------------------------------------------------------------------------
* Function: H5F_new
*
@@ -1076,7 +1076,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_new() */
/*-------------------------------------------------------------------------
* Function: H5F__dest
*
@@ -1330,7 +1330,7 @@ H5F__dest(H5F_t *f, hbool_t flush)
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__dest() */
/*-------------------------------------------------------------------------
* Function: H5F__create
*
@@ -1343,8 +1343,8 @@ H5F__dest(H5F_t *f, hbool_t flush)
* Return: Success: Non-NULL, pointer to new file object.
* Failure: NULL
*
* Programmer: Quincey Koziol
* December 13, 2017
* Programmer: Quincey Koziol
* December 13, 2017
*
*-------------------------------------------------------------------------
*/
@@ -1366,7 +1366,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* end H5F__create() */
/*-------------------------------------------------------------------------
* Function: H5F__open
*
@@ -1379,8 +1379,8 @@ done:
* Return: Success: Non-NULL, pointer to new file object.
* Failure: NULL
*
* Programmer: Quincey Koziol
* December 13, 2017
* Programmer: Quincey Koziol
* December 13, 2017
*
*-------------------------------------------------------------------------
*/
@@ -1402,7 +1402,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* end H5F__open() */
/*-------------------------------------------------------------------------
* Function: H5F_open
*
@@ -1818,7 +1818,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_open() */
/*-------------------------------------------------------------------------
* Function: H5F_flush_phase1
*
@@ -1855,7 +1855,7 @@ H5F__flush_phase1(H5F_t *f)
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__flush_phase1() */
/*-------------------------------------------------------------------------
* Function: H5F__flush_phase2
*
@@ -1881,8 +1881,8 @@ H5F__flush_phase2(H5F_t *f, hbool_t closing)
#ifdef H5_HAVE_PARALLEL
if(H5F_HAS_FEATURE(f, H5FD_FEAT_HAS_MPI))
/* Since we just returned from a call to H5AC_flush(), we just
* passed through a barrier. Hence we can skip the barrier on
/* Since we just returned from a call to H5AC_flush(), we just
* passed through a barrier. Hence we can skip the barrier on
* entry to the mpio file driver truncate call below, and the first
* barrier in the following call to flush the cache again.
*/
@@ -1923,7 +1923,7 @@ H5F__flush_phase2(H5F_t *f, hbool_t closing)
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__flush_phase2() */
/*-------------------------------------------------------------------------
* Function: H5F__flush_real
*
@@ -1955,7 +1955,7 @@ H5F__flush_real(H5F_t *f)
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__flush_real() */
/*-------------------------------------------------------------------------
* Function: H5F__flush
*
@@ -1967,8 +1967,8 @@ H5F__flush_real(H5F_t *f)
*
* Return: Non-negative on success / Negative on failure
*
* Programmer: Quincey Koziol
* December 13, 2017
* Programmer: Quincey Koziol
* December 13, 2017
*
*-------------------------------------------------------------------------
*/
@@ -1998,7 +1998,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* end H5F__flush() */
/*-------------------------------------------------------------------------
* Function: H5F__close
*
@@ -2010,8 +2010,8 @@ done:
*
* Return: Non-negative on success / Negative on failure
*
* Programmer: Quincey Koziol
* December 16, 2017
* Programmer: Quincey Koziol
* December 16, 2017
*
*-------------------------------------------------------------------------
*/
@@ -2049,7 +2049,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* end H5F__close() */
/*-------------------------------------------------------------------------
* Function: H5F__close_cb
*
@@ -2107,7 +2107,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* end H5F__close_cb() */
/*-------------------------------------------------------------------------
* Function: H5F_try_close
*
@@ -2281,7 +2281,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_try_close() */
/*-------------------------------------------------------------------------
* Function: H5F_get_id
*
@@ -2317,7 +2317,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F_get_id() */
/*-------------------------------------------------------------------------
* Function: H5F_incr_nopen_objs
*
@@ -2338,7 +2338,7 @@ H5F_incr_nopen_objs(H5F_t *f)
FUNC_LEAVE_NOAPI(++f->nopen_objs)
} /* end H5F_incr_nopen_objs() */
/*-------------------------------------------------------------------------
* Function: H5F_decr_nopen_objs
*
@@ -2359,7 +2359,7 @@ H5F_decr_nopen_objs(H5F_t *f)
FUNC_LEAVE_NOAPI(--f->nopen_objs)
} /* end H5F_decr_nopen_objs() */
/*-------------------------------------------------------------------------
* Function: H5F_build_actual_name
*
@@ -2481,7 +2481,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5F_build_actual_name() */
/*-------------------------------------------------------------------------
* Function: H5F_addr_encode_len
*
@@ -2518,7 +2518,7 @@ H5F_addr_encode_len(size_t addr_len, uint8_t **pp/*in,out*/, haddr_t addr)
FUNC_LEAVE_NOAPI_VOID
} /* end H5F_addr_encode_len() */
/*-------------------------------------------------------------------------
* Function: H5F_addr_encode
*
@@ -2542,7 +2542,7 @@ H5F_addr_encode(const H5F_t *f, uint8_t **pp/*in,out*/, haddr_t addr)
FUNC_LEAVE_NOAPI_VOID
} /* end H5F_addr_encode() */
/*-------------------------------------------------------------------------
* Function: H5F_addr_decode_len
*
@@ -2606,7 +2606,7 @@ H5F_addr_decode_len(size_t addr_len, const uint8_t **pp/*in,out*/, haddr_t *addr
FUNC_LEAVE_NOAPI_VOID
} /* end H5F_addr_decode_len() */
/*-------------------------------------------------------------------------
* Function: H5F_addr_decode
*
@@ -2633,7 +2633,7 @@ H5F_addr_decode(const H5F_t *f, const uint8_t **pp/*in,out*/, haddr_t *addr_p/*o
FUNC_LEAVE_NOAPI_VOID
} /* end H5F_addr_decode() */
/*-------------------------------------------------------------------------
* Function: H5F_set_grp_btree_shared
*
@@ -2659,7 +2659,7 @@ H5F_set_grp_btree_shared(H5F_t *f, H5UC_t *rc)
FUNC_LEAVE_NOAPI(SUCCEED)
} /* H5F_set_grp_btree_shared() */
/*-------------------------------------------------------------------------
* Function: H5F_set_sohm_addr
*
@@ -2684,7 +2684,7 @@ H5F_set_sohm_addr(H5F_t *f, haddr_t addr)
FUNC_LEAVE_NOAPI(SUCCEED)
} /* H5F_set_sohm_addr() */
/*-------------------------------------------------------------------------
* Function: H5F_set_sohm_vers
*
@@ -2709,7 +2709,7 @@ H5F_set_sohm_vers(H5F_t *f, unsigned vers)
FUNC_LEAVE_NOAPI(SUCCEED)
} /* H5F_set_sohm_vers() */
/*-------------------------------------------------------------------------
* Function: H5F_set_sohm_nindexes
*
@@ -2734,7 +2734,7 @@ H5F_set_sohm_nindexes(H5F_t *f, unsigned nindexes)
FUNC_LEAVE_NOAPI(SUCCEED)
} /* H5F_set_sohm_nindexes() */
/*-------------------------------------------------------------------------
* Function: H5F_set_store_msg_crt_idx
*
@@ -2759,7 +2759,7 @@ H5F_set_store_msg_crt_idx(H5F_t *f, hbool_t flag)
FUNC_LEAVE_NOAPI(SUCCEED)
} /* H5F_set_store_msg_crt_idx() */
/*-------------------------------------------------------------------------
* Function: H5F_set_libver_bounds()
*
@@ -2792,19 +2792,19 @@ H5F__set_libver_bounds(H5F_t *f, H5F_libver_t low, H5F_libver_t high)
* metadata entry class changes when the file format low / high
* bounds are changed and an unwritten entry of that class is
* sitting in the metadata cache.
*
*
* If that happens, it's possible that the entry's size could
* become larger, potentially corrupting the file (if the larger
* entry is fully written, overwriting data outside its allocated
* space), or corrupting the entry (if the entry is truncated to
* fit into the allocated space).
*
*
* Although I'm not aware of any metadata with this behavior
* currently, it would be very difficult to guard against and / or
* detect, but if we flush everything here, the format version
* for metadata entries in the cache will be finalized and these
* sorts of problems can be avoided.
*
*
* QAK - April, 2018
*/
if(H5F__flush_real(f) < 0)
@@ -2819,7 +2819,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5F_set_libver_bounds() */
/*-------------------------------------------------------------------------
* Function: H5F__get_freespace
*
@@ -2851,7 +2851,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* H5F__get_freespace() */
/*-------------------------------------------------------------------------
* Function: H5F__get_file_image
*
@@ -2961,7 +2961,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* H5F__get_file_image() */
/*-------------------------------------------------------------------------
* Function: H5F__get_info
*
@@ -3011,7 +3011,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* H5F__get_info() */
/*-------------------------------------------------------------------------
* Function: H5F_track_metadata_read_retries
*
@@ -3059,7 +3059,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5F_track_metadata_read_retries() */
/*-------------------------------------------------------------------------
* Function: H5F_set_retries
*
@@ -3095,7 +3095,7 @@ H5F_set_retries(H5F_t *f)
FUNC_LEAVE_NOAPI(SUCCEED)
} /* H5F_set_retries() */
/*-------------------------------------------------------------------------
* Function: H5F__get_free_sections
*
@@ -3128,7 +3128,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* H5F__get_free_sections() */
/*-------------------------------------------------------------------------
* Function: H5F_object_flush_cb
*
@@ -3158,7 +3158,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5F_object_flush_cb() */
/*-------------------------------------------------------------------------
* Function: H5F__set_base_addr
*
@@ -3185,7 +3185,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__set_base_addr() */
/*-------------------------------------------------------------------------
* Function: H5F__set_eoa
*
@@ -3212,7 +3212,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__set_eoa() */
/*-------------------------------------------------------------------------
* Function: H5F__set_paged_aggr
*
@@ -3240,7 +3240,7 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5F__set_paged_aggr() */
/*-------------------------------------------------------------------------
* Function: H5F__get_max_eof_eoa
*
@@ -3279,7 +3279,7 @@ done:
} /* end H5F__get_max_eof_eoa() */
#ifdef H5_HAVE_PARALLEL
/*-------------------------------------------------------------------------
* Function: H5F_set_coll_md_read
*
@@ -3304,7 +3304,7 @@ H5F_set_coll_md_read(H5F_t *f, H5P_coll_md_read_flag_t cmr)
} /* H5F_set_coll_md_read() */
#endif /* H5_HAVE_PARALLEL */
/*-------------------------------------------------------------------------
* Function: H5F__get_metadata_read_retry_info
*
@@ -3394,7 +3394,7 @@ done:
} /* end H5F__get_metadata_read_retry_info() */
/*-------------------------------------------------------------------------
* Function: H5F__start_swmr_write
*
@@ -3619,7 +3619,7 @@ done:
FUNC_LEAVE_NOAPI_VOL(ret_value)
} /* H5F__start_swmr_write() */
/*-------------------------------------------------------------------------
* Function: H5F__format_convert
*
@@ -3635,7 +3635,7 @@ done:
herr_t
H5F__format_convert(H5F_t *f)
{
hbool_t mark_dirty = FALSE; /* Whether to mark the file's superblock dirty */
hbool_t mark_dirty = FALSE; /* Whether to mark the file's superblock dirty */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_PACKAGE_VOL
@@ -3646,39 +3646,39 @@ H5F__format_convert(H5F_t *f)
/* Check if the superblock should be downgraded */
if(f->shared->sblock->super_vers > HDF5_SUPERBLOCK_VERSION_V18_LATEST) {
f->shared->sblock->super_vers = HDF5_SUPERBLOCK_VERSION_V18_LATEST;
mark_dirty = TRUE;
f->shared->sblock->super_vers = HDF5_SUPERBLOCK_VERSION_V18_LATEST;
mark_dirty = TRUE;
} /* end if */
/* Check for persistent freespace manager, which needs to be downgraded */
if(!(f->shared->fs_strategy == H5F_FILE_SPACE_STRATEGY_DEF &&
f->shared->fs_persist == H5F_FREE_SPACE_PERSIST_DEF &&
f->shared->fs_threshold == H5F_FREE_SPACE_THRESHOLD_DEF &&
f->shared->fs_page_size == H5F_FILE_SPACE_PAGE_SIZE_DEF)) {
/* Check to remove free-space manager info message from superblock extension */
if(H5F_addr_defined(f->shared->sblock->ext_addr))
if(H5F__super_ext_remove_msg(f, H5O_FSINFO_ID) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "error in removing message from superblock extension")
f->shared->fs_persist == H5F_FREE_SPACE_PERSIST_DEF &&
f->shared->fs_threshold == H5F_FREE_SPACE_THRESHOLD_DEF &&
f->shared->fs_page_size == H5F_FILE_SPACE_PAGE_SIZE_DEF)) {
/* Check to remove free-space manager info message from superblock extension */
if(H5F_addr_defined(f->shared->sblock->ext_addr))
if(H5F__super_ext_remove_msg(f, H5O_FSINFO_ID) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "error in removing message from superblock extension")
/* Close freespace manager */
if(H5MF_try_close(f) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "unable to free free-space address")
/* Close freespace manager */
if(H5MF_try_close(f) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "unable to free free-space address")
/* Set non-persistent freespace manager */
f->shared->fs_strategy = H5F_FILE_SPACE_STRATEGY_DEF;
f->shared->fs_persist = H5F_FREE_SPACE_PERSIST_DEF;
f->shared->fs_threshold = H5F_FREE_SPACE_THRESHOLD_DEF;
f->shared->fs_page_size = H5F_FILE_SPACE_PAGE_SIZE_DEF;
/* Set non-persistent freespace manager */
f->shared->fs_strategy = H5F_FILE_SPACE_STRATEGY_DEF;
f->shared->fs_persist = H5F_FREE_SPACE_PERSIST_DEF;
f->shared->fs_threshold = H5F_FREE_SPACE_THRESHOLD_DEF;
f->shared->fs_page_size = H5F_FILE_SPACE_PAGE_SIZE_DEF;
/* Indicate that the superblock should be marked dirty */
mark_dirty = TRUE;
/* Indicate that the superblock should be marked dirty */
mark_dirty = TRUE;
} /* end if */
/* Check if we should mark the superblock dirty */
if(mark_dirty)
/* Mark superblock as dirty */
if(H5F_super_dirty(f) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
/* Mark superblock as dirty */
if(H5F_super_dirty(f) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
done:
FUNC_LEAVE_NOAPI_VOL(ret_value)