Bring r18715 from metadata journaling merging branch to trunk:
Changes to further align trunk with state of metadata journaling branch.
Tested on:
FreeBSD/32 6.3 (duty) in debug mode
FreeBSD/64 6.3 (liberty) w/C++ & FORTRAN, in debug mode
Linux/32 2.6 (jam) w/PGI compilers, w/default API=1.8.x,
w/C++ & FORTRAN, w/threadsafe, in debug mode
Linux/64-amd64 2.6 (amani) w/Intel compilers, w/default API=1.6.x,
w/C++ & FORTRAN, in production mode
Solaris/32 2.10 (linew) w/deprecated symbols disabled, w/C++ & FORTRAN,
w/szip filter, in production mode
Linux/64-ia64 2.6 (cobalt) w/Intel compilers, w/C++ & FORTRAN,
in production mode
Linux/64-amd64 2.6 (abe) w/parallel, w/FORTRAN, in production mode
Mac OS X/32 10.6.3 (amazon) in debug mode
Mac OS X/32 10.6.3 (amazon) w/C++ & FORTRAN, w/threadsafe,
in production mode
439 lines
14 KiB
C
439 lines
14 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by The HDF Group. *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the files COPYING and Copyright.html. COPYING can be found at the root *
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* of the source code distribution tree; Copyright.html can be found at the *
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* root level of an installed copy of the electronic HDF5 document set and *
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* is linked from the top-level documents page. It can also be found at *
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* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
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* access to either file, you may request a copy from help@hdfgroup.org. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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/*-------------------------------------------------------------------------
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*
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* Created: H5HGcache.c
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* Feb 5 2008
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* Quincey Koziol <koziol@hdfgroup.org>
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*
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* Purpose: Implement global heap metadata cache methods.
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*
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*-------------------------------------------------------------------------
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*/
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/****************/
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/* Module Setup */
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/****************/
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#define H5F_PACKAGE /*suppress error about including H5Fpkg */
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#define H5HG_PACKAGE /*suppress error about including H5HGpkg */
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/***********/
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/* Headers */
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/***********/
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#include "H5private.h" /* Generic Functions */
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#include "H5Eprivate.h" /* Error handling */
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#include "H5Fpkg.h" /* File access */
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#include "H5HGpkg.h" /* Global heaps */
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#include "H5MFprivate.h" /* File memory management */
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#include "H5MMprivate.h" /* Memory management */
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/****************/
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/* Local Macros */
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/****************/
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/******************/
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/* Local Typedefs */
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/******************/
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/********************/
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/* Package Typedefs */
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/********************/
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/********************/
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/* Local Prototypes */
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/********************/
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/* Metadata cache callbacks */
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static H5HG_heap_t *H5HG_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata);
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static herr_t H5HG_flush(H5F_t *f, hid_t dxpl_id, hbool_t dest, haddr_t addr,
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H5HG_heap_t *heap, unsigned UNUSED * flags_ptr);
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static herr_t H5HG_dest(H5F_t *f, H5HG_heap_t *heap);
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static herr_t H5HG_clear(H5F_t *f, H5HG_heap_t *heap, hbool_t destroy);
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static herr_t H5HG_size(const H5F_t *f, const H5HG_heap_t *heap, size_t *size_ptr);
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/*********************/
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/* Package Variables */
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/*********************/
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/* H5HG inherits cache-like properties from H5AC */
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const H5AC_class_t H5AC_GHEAP[1] = {{
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H5AC_GHEAP_ID,
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(H5AC_load_func_t)H5HG_load,
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(H5AC_flush_func_t)H5HG_flush,
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(H5AC_dest_func_t)H5HG_dest,
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(H5AC_clear_func_t)H5HG_clear,
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(H5AC_notify_func_t)NULL,
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(H5AC_size_func_t)H5HG_size,
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}};
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/*****************************/
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/* Library Private Variables */
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/*****************************/
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/*******************/
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/* Local Variables */
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/*******************/
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/*-------------------------------------------------------------------------
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* Function: H5HG_load
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*
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* Purpose: Loads a global heap collection from disk.
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*
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* Return: Success: Ptr to a global heap collection.
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*
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* Failure: NULL
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*
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* Programmer: Robb Matzke
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* Friday, March 27, 1998
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*
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*-------------------------------------------------------------------------
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*/
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static H5HG_heap_t *
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H5HG_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *udata)
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{
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H5HG_heap_t *heap = NULL;
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uint8_t *p;
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size_t nalloc, need;
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size_t max_idx = 0; /* The maximum index seen */
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H5HG_heap_t *ret_value = NULL; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5HG_load)
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/* check arguments */
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HDassert(f);
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HDassert(H5F_addr_defined(addr));
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HDassert(udata);
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/* Read the initial 4k page */
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if(NULL == (heap = H5FL_CALLOC(H5HG_heap_t)))
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HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
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heap->shared = f->shared;
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if(NULL == (heap->chunk = H5FL_BLK_MALLOC(gheap_chunk, (size_t)H5HG_MINSIZE)))
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HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
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if(H5F_block_read(f, H5FD_MEM_GHEAP, addr, (size_t)H5HG_MINSIZE, dxpl_id, heap->chunk) < 0)
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HGOTO_ERROR(H5E_HEAP, H5E_READERROR, NULL, "unable to read global heap collection")
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p = heap->chunk;
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/* Magic number */
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if(HDmemcmp(p, H5HG_MAGIC, (size_t)H5_SIZEOF_MAGIC))
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HGOTO_ERROR(H5E_HEAP, H5E_CANTLOAD, NULL, "bad global heap collection signature")
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p += H5_SIZEOF_MAGIC;
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/* Version */
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if(H5HG_VERSION != *p++)
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HGOTO_ERROR(H5E_HEAP, H5E_CANTLOAD, NULL, "wrong version number in global heap")
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/* Reserved */
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p += 3;
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/* Size */
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H5F_DECODE_LENGTH(f, p, heap->size);
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HDassert(heap->size >= H5HG_MINSIZE);
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/*
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* If we didn't read enough in the first try, then read the rest of the
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* collection now.
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*/
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if(heap->size > H5HG_MINSIZE) {
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haddr_t next_addr = addr + (hsize_t)H5HG_MINSIZE;
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if(NULL == (heap->chunk = H5FL_BLK_REALLOC(gheap_chunk, heap->chunk, heap->size)))
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HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
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if(H5F_block_read(f, H5FD_MEM_GHEAP, next_addr, (heap->size - H5HG_MINSIZE), dxpl_id, heap->chunk + H5HG_MINSIZE) < 0)
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HGOTO_ERROR(H5E_HEAP, H5E_READERROR, NULL, "unable to read global heap collection")
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} /* end if */
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/* Decode each object */
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p = heap->chunk + H5HG_SIZEOF_HDR(f);
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nalloc = H5HG_NOBJS(f, heap->size);
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/* Calloc the obj array because the file format spec makes no guarantee
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* about the order of the objects, and unused slots must be set to zero.
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*/
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if(NULL == (heap->obj = H5FL_SEQ_CALLOC(H5HG_obj_t, nalloc)))
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HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
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heap->nalloc = nalloc;
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while(p < (heap->chunk + heap->size)) {
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if((p + H5HG_SIZEOF_OBJHDR(f)) > (heap->chunk + heap->size)) {
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/*
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* The last bit of space is too tiny for an object header, so we
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* assume that it's free space.
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*/
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HDassert(NULL == heap->obj[0].begin);
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heap->obj[0].size = ((const uint8_t *)heap->chunk + heap->size) - p;
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heap->obj[0].begin = p;
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p += heap->obj[0].size;
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} /* end if */
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else {
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unsigned idx;
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uint8_t *begin = p;
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UINT16DECODE(p, idx);
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/* Check if we need more room to store heap objects */
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if(idx >= heap->nalloc) {
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size_t new_alloc; /* New allocation number */
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H5HG_obj_t *new_obj; /* New array of object descriptions */
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/* Determine the new number of objects to index */
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new_alloc = MAX(heap->nalloc * 2, (idx + 1));
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HDassert(idx < new_alloc);
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/* Reallocate array of objects */
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if(NULL == (new_obj = H5FL_SEQ_REALLOC(H5HG_obj_t, heap->obj, new_alloc)))
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HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
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/* Clear newly allocated space */
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HDmemset(&new_obj[heap->nalloc], 0, (new_alloc - heap->nalloc) * sizeof(heap->obj[0]));
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/* Update heap information */
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heap->nalloc = new_alloc;
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heap->obj = new_obj;
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HDassert(heap->nalloc > heap->nused);
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} /* end if */
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UINT16DECODE(p, heap->obj[idx].nrefs);
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p += 4; /*reserved*/
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H5F_DECODE_LENGTH(f, p, heap->obj[idx].size);
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heap->obj[idx].begin = begin;
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/*
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* The total storage size includes the size of the object header
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* and is zero padded so the next object header is properly
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* aligned. The entire obj array was calloc'ed, so no need to zero
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* the space here. The last bit of space is the free space object
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* whose size is never padded and already includes the object
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* header.
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*/
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if(idx > 0) {
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need = H5HG_SIZEOF_OBJHDR(f) + H5HG_ALIGN(heap->obj[idx].size);
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if(idx > max_idx)
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max_idx = idx;
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} /* end if */
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else
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need = heap->obj[idx].size;
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p = begin + need;
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} /* end else */
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} /* end while */
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HDassert(p == heap->chunk + heap->size);
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HDassert(H5HG_ISALIGNED(heap->obj[0].size));
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/* Set the next index value to use */
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if(max_idx > 0)
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heap->nused = max_idx + 1;
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else
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heap->nused = 1;
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HDassert(max_idx < heap->nused);
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/*
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* Add the new heap to the CWFS list, removing some other entry if
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* necessary to make room. We remove the right-most entry that has less
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* free space than this heap.
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*/
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if(!f->shared->cwfs) {
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if(NULL == (f->shared->cwfs = (H5HG_heap_t **)H5MM_malloc(H5HG_NCWFS * sizeof(H5HG_heap_t *))))
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HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
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f->shared->ncwfs = 1;
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f->shared->cwfs[0] = heap;
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} else if(H5HG_NCWFS == f->shared->ncwfs) {
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int i; /* Local index variable */
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for(i = H5HG_NCWFS - 1; i >= 0; --i)
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if(f->shared->cwfs[i]->obj[0].size < heap->obj[0].size) {
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HDmemmove(f->shared->cwfs + 1, f->shared->cwfs, i * sizeof(H5HG_heap_t *));
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f->shared->cwfs[0] = heap;
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break;
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} /* end if */
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} else {
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HDmemmove(f->shared->cwfs + 1, f->shared->cwfs, f->shared->ncwfs * sizeof(H5HG_heap_t *));
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f->shared->ncwfs += 1;
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f->shared->cwfs[0] = heap;
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} /* end else */
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ret_value = heap;
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done:
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if(!ret_value && heap)
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if(H5HG_free(heap) < 0)
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HDONE_ERROR(H5E_HEAP, H5E_CANTFREE, NULL, "unable to destroy global heap collection")
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FUNC_LEAVE_NOAPI(ret_value)
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} /* end H5HG_load() */
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/*-------------------------------------------------------------------------
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* Function: H5HG_flush
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*
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* Purpose: Flushes a global heap collection from memory to disk if it's
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* dirty. Optionally deletes teh heap from memory.
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*
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* Return: Non-negative on success/Negative on failure
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*
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* Programmer: Robb Matzke
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* Friday, March 27, 1998
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*
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*-------------------------------------------------------------------------
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*/
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static herr_t
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H5HG_flush(H5F_t *f, hid_t dxpl_id, hbool_t destroy, haddr_t addr, H5HG_heap_t *heap, unsigned UNUSED * flags_ptr)
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{
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herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5HG_flush)
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/* Check arguments */
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HDassert(f);
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HDassert(H5F_addr_defined(addr));
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HDassert(H5F_addr_eq(addr, heap->addr));
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HDassert(heap);
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if(heap->cache_info.is_dirty) {
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if(H5F_block_write(f, H5FD_MEM_GHEAP, addr, heap->size, dxpl_id, heap->chunk) < 0)
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HGOTO_ERROR(H5E_HEAP, H5E_WRITEERROR, FAIL, "unable to write global heap collection to file")
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heap->cache_info.is_dirty = FALSE;
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} /* end if */
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if(destroy)
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if(H5HG_dest(f, heap) < 0)
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HGOTO_ERROR(H5E_HEAP, H5E_CANTFREE, FAIL, "unable to destroy global heap collection")
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done:
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FUNC_LEAVE_NOAPI(ret_value)
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} /* end H5HG_flush() */
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/*-------------------------------------------------------------------------
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* Function: H5HG_dest
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*
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* Purpose: Destroys a global heap collection in memory
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*
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* Return: Non-negative on success/Negative on failure
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*
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* Programmer: Quincey Koziol
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* Wednesday, January 15, 2003
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*
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*-------------------------------------------------------------------------
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*/
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static herr_t
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H5HG_dest(H5F_t *f, H5HG_heap_t *heap)
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{
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herr_t ret_value = SUCCEED; /* Return value */
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FUNC_ENTER_NOAPI_NOINIT(H5HG_dest)
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/* Check arguments */
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HDassert(heap);
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/* Verify that node is clean */
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HDassert(heap->cache_info.is_dirty == FALSE);
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/* If we're going to free the space on disk, the address must be valid */
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HDassert(!heap->cache_info.free_file_space_on_destroy || H5F_addr_defined(heap->cache_info.addr));
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/* Check for freeing file space for globalheap */
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if(heap->cache_info.free_file_space_on_destroy) {
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/* Release the space on disk */
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/* (XXX: Nasty usage of internal DXPL value! -QAK) */
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if(H5MF_xfree(f, H5FD_MEM_GHEAP, H5AC_dxpl_id, heap->cache_info.addr, (hsize_t)heap->size) < 0)
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HGOTO_ERROR(H5E_BTREE, H5E_CANTFREE, FAIL, "unable to free global heap")
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} /* end if */
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/* Destroy global heap collection */
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if(H5HG_free(heap) < 0)
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HGOTO_ERROR(H5E_HEAP, H5E_CANTFREE, FAIL, "unable to destroy global heap collection")
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done:
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FUNC_LEAVE_NOAPI(ret_value)
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} /* H5HG_dest() */
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/*-------------------------------------------------------------------------
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* Function: H5HG_clear
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*
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* Purpose: Mark a global heap in memory as non-dirty.
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*
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* Return: Non-negative on success/Negative on failure
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*
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* Programmer: Quincey Koziol
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* Thursday, March 20, 2003
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*
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*-------------------------------------------------------------------------
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*/
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static herr_t
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H5HG_clear(H5F_t *f, H5HG_heap_t *heap, hbool_t destroy)
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{
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herr_t ret_value = SUCCEED;
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FUNC_ENTER_NOAPI_NOINIT(H5HG_clear)
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/* Check arguments */
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HDassert(heap);
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/* Mark heap as clean */
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heap->cache_info.is_dirty = FALSE;
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if(destroy)
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if(H5HG_dest(f, heap) < 0)
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HGOTO_ERROR(H5E_HEAP, H5E_CANTFREE, FAIL, "unable to destroy global heap collection")
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done:
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FUNC_LEAVE_NOAPI(ret_value)
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} /* H5HG_clear() */
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/*-------------------------------------------------------------------------
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* Function: H5HG_size
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*
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* Purpose: Compute the size in bytes of the specified instance of
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* H5HG_heap_t on disk, and return it in *len_ptr. On failure,
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* the value of *len_ptr is undefined.
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*
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* Return: Non-negative on success/Negative on failure
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*
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* Programmer: John Mainzer
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* 5/13/04
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*
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*-------------------------------------------------------------------------
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*/
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static herr_t
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H5HG_size(const H5F_t UNUSED *f, const H5HG_heap_t *heap, size_t *size_ptr)
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{
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FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5HG_size)
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/* Check arguments */
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HDassert(heap);
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HDassert(size_ptr);
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*size_ptr = heap->size;
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FUNC_LEAVE_NOAPI(SUCCEED)
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} /* H5HG_size() */
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