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fa8bda3358e73886f92b6ee2d6261b323c6e1999
hdf5/tools/lib/h5tools_str.c
Jonathan Kim 8ff85dff9b [svn-r20198] Purpose: 
Fixing Bug 2161 - GMQS: h5dump - only on Windows, skip displaying a data value every a certain lines in array type dataset

Description:
    Merged from HDF5 trunk r20188.
    Fixed h5dump for skipping some values for long array type dataset on 
    Windows. This issue only occurred on Windows due to the different 
    return behavior from _vsnprintf() funtion.
     
Tested:
 Windows, jam (linux32-LE), amani (linux64-LE), heiwa (linuxppc64-BE)
2011-03-08 10:24:17 -05:00

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/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/*
* Programmer: Bill Wendling <wendling@ncsa.uiuc.edu>
* Monday, 19. February 2001
*
* Purpose: These are string functions for us to use and abuse.
*/
#include <stdarg.h>
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include "H5private.h"
#include "h5tools.h" /*for h5tool_format_t structure */
#include "h5tools_ref.h"
#include "h5tools_str.h" /*function prototypes */
/*
* If REPEAT_VERBOSE is defined then character strings will be printed so
* that repeated character sequences like "AAAAAAAAAA" are displayed as
*
* 'A' repeates 9 times
*
* Otherwise the format is more Perl-like
*
* 'A'*10
*
*/
#define REPEAT_VERBOSE
/* Variable length string datatype */
#define STR_INIT_LEN 4096 /*initial length */
static char *h5tools_escape(char *s, size_t size);
static hbool_t h5tools_str_is_zero(const void *_mem, size_t size);
static void h5tools_print_char(h5tools_str_t *str, const h5tool_format_t *info, char ch);
/*-------------------------------------------------------------------------
* Function: h5tools_str_close
*
* Purpose: Closes a string by releasing it's memory and setting the size
* information to zero.
*
* Return: void
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
void
h5tools_str_close(h5tools_str_t *str)
{
if (str && str->nalloc) {
free(str->s);
memset(str, 0, sizeof(h5tools_str_t));
}
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_len
*
* Purpose: Returns the length of the string, not counting the null
* terminator.
*
* Return: Success: Length of string
*
* Failure: 0
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
size_t
h5tools_str_len(h5tools_str_t *str)
{
return str->len;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_append
*
* Purpose: Formats variable arguments according to printf() format
* string and appends the result to variable length string STR.
*
* Return: Success: Pointer to buffer containing result.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
* Major change: need to check results of vsnprintf to
* handle errors, empty format, and overflows.
*
* Programmer: REMcG Matzke
* June 16, 2004
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_append(h5tools_str_t *str/*in,out*/, const char *fmt, ...)
{
va_list ap;
hbool_t isReallocated = FALSE;
/* Make sure we have some memory into which to print */
if (!str->s || str->nalloc <= 0) {
str->nalloc = STR_INIT_LEN;
str->s = malloc(str->nalloc);
assert(str->s);
str->s[0] = '\0';
str->len = 0;
}
if (strlen(fmt) == 0) {
/* nothing to print */
return str->s;
}
/* Format the arguments and append to the value already in `str' */
while (1) {
/* How many bytes available for new value, counting the new NUL */
size_t avail = str->nalloc - str->len;
int nchars = -1;
va_start(ap, fmt);
nchars = HDvsnprintf(str->s + str->len, avail, fmt, ap);
va_end(ap);
/* Note: HDvsnprintf() behaves differently on Windows as Unix, when
* buffer is smaller than source string. On Unix, this function
* returns length of the source string and copy string upto the
* buffer size with NULL at the end of the buffer. However on
* Windows with the same condition, this function returns -1 and
* doesn't add NULL at the end of the buffer.
* Because of this different return results, isReallocated variable
* is used to handle when HDvsnprintf() returns -1 on Windows due
* to lack of buffer size, so try one more time after realloc more
* buffer size before return NULL.
*/
if (nchars < 0 && isReallocated == TRUE) {
/* failure, such as bad format */
return NULL;
}
if (nchars < 0 || (size_t) nchars >= avail || (0 == nchars && (strcmp(fmt, "%s")))) {
/* Truncation return value as documented by C99, or zero return value with either of the
* following conditions, each of which indicates that the proper C99 return value probably
* should have been positive when the format string is
* something other than "%s"
* Alocate at least twice as much space and try again.
*/
size_t newsize = MAX(str->len + nchars + 1, 2 * str->nalloc);
assert(newsize > str->nalloc); /*overflow*/
str->s = realloc(str->s, newsize);
assert(str->s);
str->nalloc = newsize;
isReallocated = TRUE;
}
else {
/* Success */
str->len += nchars;
break;
}
}
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_reset
*
* Purpose: Reset the string to the empty value. If no memory is
* allocated yet then initialize the h5tools_str_t struct.
*
* Return: Success: Ptr to the buffer which contains a null
* character as the first element.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_reset(h5tools_str_t *str/*in,out*/)
{
if (!str->s || str->nalloc <= 0) {
str->nalloc = STR_INIT_LEN;
str->s = malloc(str->nalloc);
assert(str->s);
}
str->s[0] = '\0';
str->len = 0;
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_trunc
*
* Purpose: Truncate a string to be at most SIZE characters.
*
* Return: Success: Pointer to the string
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_trunc(h5tools_str_t *str/*in,out*/, size_t size)
{
if (size < str->len) {
str->len = size;
str->s[size] = '\0';
}
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_fmt
*
* Purpose: Reformat a string contents beginning at character START
* according to printf format FMT. FMT should contain no format
* specifiers except possibly the `%s' variety. For example, if
* the input string is `hello' and the format is "<<%s>>" then
* the output value will be "<<hello>>".
*
* Return: Success: A pointer to the resulting string.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_fmt(h5tools_str_t *str/*in,out*/, size_t start, const char *fmt)
{
char _temp[1024], *temp = _temp;
/* If the format string is simply "%s" then don't bother doing anything */
if (!strcmp(fmt, "%s"))
return str->s;
/*
* Save the input value if there is a `%' anywhere in FMT. Otherwise
* don't bother because we don't need a temporary copy.
*/
if (strchr(fmt, '%')) {
if (str->len - start + 1 > sizeof(_temp)) {
temp = malloc(str->len - start + 1);
assert(temp);
}
strcpy(temp, str->s + start);
}
/* Reset the output string and append a formatted version */
h5tools_str_trunc(str, start);
h5tools_str_append(str, fmt, temp);
/* Free the temp buffer if we allocated one */
if (temp != _temp)
free(temp);
return str->s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_prefix
*
* Purpose: Renders the line prefix value into string STR.
*
* Return: Success: Pointer to the prefix.
*
* Failure: NULL
*
* Programmer: Robb Matzke
* Thursday, July 23, 1998
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
char *
h5tools_str_prefix(h5tools_str_t *str/*in,out*/, const h5tool_format_t *info,
hsize_t elmtno, unsigned ndims, h5tools_context_t *ctx)
{
size_t i = 0;
hsize_t curr_pos = elmtno;
h5tools_str_reset(str);
if (ndims > 0) {
/*
* Calculate the number of elements represented by a unit change in a
* certain index position.
*/
for (i = 0; i < (size_t) ndims; i++) {
ctx->pos[i] = curr_pos / ctx->acc[i];
curr_pos -= ctx->acc[i] * ctx->pos[i];
}
assert(curr_pos == 0);
/* Print the index values */
for (i = 0; i < (size_t) ndims; i++) {
if (i)
h5tools_str_append(str, "%s", OPT(info->idx_sep, ","));
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT),
(hsize_t) ctx->pos[i]);
}
}
else {
/* Scalar */
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t) 0);
}
/* Add prefix and suffix to the index */
return h5tools_str_fmt(str, 0, OPT(info->idx_fmt, "%s: "));
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_region_prefix
*
* Purpose: Renders the line prefix value into string STR. Region reference specific.
*
* Return: Success: Pointer to the prefix.
* Failure: NULL
*
* In/Out:
* h5tools_context_t *ctx
* h5tools_str_t *str
*-------------------------------------------------------------------------
*/
char *
h5tools_str_region_prefix(h5tools_str_t *str, const h5tool_format_t *info,
hsize_t elmtno, hsize_t *ptdata, unsigned ndims, hsize_t max_idx[],
h5tools_context_t *ctx)
{
hsize_t p_prod[H5S_MAX_RANK];
size_t i = 0;
hsize_t curr_pos = elmtno;
h5tools_str_reset(str);
if (ndims > 0) {
/*
* Calculate the number of elements represented by a unit change in a
* certain index position.
*/
for (i = ndims - 1, p_prod[ndims - 1] = 1; i > 0; --i)
p_prod[i - 1] = (max_idx[i]) * p_prod[i];
for (i = 0; i < (size_t) ndims; i++) {
ctx->pos[i] = curr_pos / p_prod[i];
curr_pos -= p_prod[i] * ctx->pos[i];
ctx->pos[i] += (unsigned long) ptdata[ctx->sm_pos+i];
}
/* Print the index values */
for (i = 0; i < (size_t) ndims; i++) {
if (i)
h5tools_str_append(str, "%s", OPT(info->idx_sep, ","));
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t) ctx->pos[i]);
}
} /* if (ndims > 0) */
else {
/* Scalar */
h5tools_str_append(str, OPT(info->idx_n_fmt, HSIZE_T_FORMAT), (hsize_t) 0);
}
/* Add prefix and suffix to the index */
return h5tools_str_fmt(str, 0, OPT(info->idx_fmt, "%s: "));
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_dump_region_blocks
*
* Purpose: Prints information about a dataspace region by appending
* the information to the specified string.
*
* Return: none
*
* In/Out:
* h5tools_context_t *ctx
* h5tools_str_t *str
*-------------------------------------------------------------------------
*/
void
h5tools_str_dump_region_blocks(h5tools_str_t *str, hid_t region,
const h5tool_format_t *info)
{
hssize_t nblocks;
hsize_t alloc_size;
hsize_t *ptdata;
int ndims = H5Sget_simple_extent_ndims(region);
/*
* This function fails if the region does not have blocks.
*/
H5E_BEGIN_TRY {
nblocks = H5Sget_select_hyper_nblocks(region);
} H5E_END_TRY;
/* Print block information */
if (nblocks > 0) {
int i;
alloc_size = nblocks * ndims * 2 * sizeof(ptdata[0]);
assert(alloc_size == (hsize_t) ((size_t) alloc_size)); /*check for overflow*/
ptdata = (hsize_t *)malloc((size_t) alloc_size);
H5_CHECK_OVERFLOW(nblocks, hssize_t, hsize_t);
H5Sget_select_hyper_blocklist(region, (hsize_t)0, (hsize_t)nblocks, ptdata);
for (i = 0; i < nblocks; i++) {
int j;
h5tools_str_append(str, info->dset_blockformat_pre, i ? "," OPTIONAL_LINE_BREAK " " : "",
(unsigned long)i);
/* Start coordinates and opposite corner */
for (j = 0; j < ndims; j++)
h5tools_str_append(str, "%s%lu", j ? "," : "(",
(unsigned long) ptdata[i * 2 * ndims + j]);
for (j = 0; j < ndims; j++)
h5tools_str_append(str, "%s%lu", j ? "," : ")-(",
(unsigned long) ptdata[i * 2 * ndims + j + ndims]);
h5tools_str_append(str, ")");
}
free(ptdata);
} /* end if (nblocks > 0) */
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_dump_region_points
*
* Purpose: Prints information about a dataspace region by appending
* the information to the specified string.
*
* Return: none
*
* In/Out:
* h5tools_context_t *ctx
* h5tools_str_t *str
*-------------------------------------------------------------------------
*/
void
h5tools_str_dump_region_points(h5tools_str_t *str, hid_t region,
const h5tool_format_t *info)
{
hssize_t npoints;
hsize_t alloc_size;
hsize_t *ptdata;
int ndims = H5Sget_simple_extent_ndims(region);
/*
* This function fails if the region does not have points.
*/
H5E_BEGIN_TRY {
npoints = H5Sget_select_elem_npoints(region);
} H5E_END_TRY;
/* Print point information */
if (npoints > 0) {
int i;
alloc_size = npoints * ndims * sizeof(ptdata[0]);
assert(alloc_size == (hsize_t) ((size_t) alloc_size)); /*check for overflow*/
ptdata = (hsize_t *)malloc((size_t) alloc_size);
H5_CHECK_OVERFLOW(npoints, hssize_t, hsize_t);
H5Sget_select_elem_pointlist(region, (hsize_t)0, (hsize_t)npoints, ptdata);
for (i = 0; i < npoints; i++) {
int j;
h5tools_str_append(str, info->dset_ptformat_pre, i ? "," OPTIONAL_LINE_BREAK " " : "",
(unsigned long)i);
for (j = 0; j < ndims; j++)
h5tools_str_append(str, "%s%lu", j ? "," : "(",
(unsigned long) (ptdata[i * ndims + j]));
h5tools_str_append(str, ")");
}
free(ptdata);
} /* end if (npoints > 0) */
}
/*-------------------------------------------------------------------------
* Function: h5tools_print_char
*
* Purpose: Shove a character into the STR.
*
* Return: Nothing
*
*-------------------------------------------------------------------------
*/
static void
h5tools_print_char(h5tools_str_t *str, const h5tool_format_t *info, char ch)
{
if (info->str_locale == ESCAPE_HTML) {
if (ch <= ' ' || ch > '~')
h5tools_str_append(str, "%%%02x", ch);
else
h5tools_str_append(str, "%c", ch);
}
else {
switch (ch) {
case '"':
if (!info->do_escape)
h5tools_str_append(str, "\"");
else
h5tools_str_append(str, "\\\"");
break;
case '\\':
if (!info->do_escape)
h5tools_str_append(str, "\\");
else
h5tools_str_append(str, "\\\\");
break;
case '\b':
if (!info->do_escape)
h5tools_str_append(str, "\b");
else
h5tools_str_append(str, "\\b");
break;
case '\f':
if (!info->do_escape)
h5tools_str_append(str, "\f");
else
h5tools_str_append(str, "\\f");
break;
case '\n':
if (!info->do_escape) {
h5tools_str_append(str, "\n");
h5tools_str_append(str, " ");
}
else
h5tools_str_append(str, "\\n");
break;
case '\r':
if (!info->do_escape) {
h5tools_str_append(str, "\r");
h5tools_str_append(str, " ");
}
else
h5tools_str_append(str, "\\r");
break;
case '\t':
if (!info->do_escape)
h5tools_str_append(str, "\t");
else
h5tools_str_append(str, "\\t");
break;
default:
if (isprint(ch))
h5tools_str_append(str, "%c", ch);
else
h5tools_str_append(str, "\\%03o", ch);
break;
}
}
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_sprint
*
* Purpose: Renders the value pointed to by VP of type TYPE into variable
* length string STR.
*
* Return: A pointer to memory containing the result or NULL on error.
*
* Programmer: Robb Matzke
* Thursday, July 23, 1998
*
* Modifications:
* Robb Matzke, 1999-04-26
* Made this function safe from overflow problems by allowing it
* to reallocate the output string.
*
* Robb Matzke, 1999-06-04
* Added support for object references. The new `container'
* argument is the dataset where the reference came from.
*
* Robb Matzke, 1999-06-07
* Added support for printing raw data. If info->raw is non-zero
* then data is printed in hexadecimal format.
*
* Robb Matzke, 2003-01-10
* Binary output format is dd:dd:... instead of 0xdddd... so it
* doesn't look like a hexadecimal integer, and thus users will
* be less likely to complain that HDF5 didn't properly byte
* swap their data during type conversion.
*
* Robb Matzke, LLNL, 2003-06-05
* If TYPE is a variable length string then the pointer to
* the value to pring (VP) is a pointer to a `char*'.
*
* PVN, 28 March 2006
* added H5T_NATIVE_LDOUBLE case
*-------------------------------------------------------------------------
*/
char *
h5tools_str_sprint(h5tools_str_t *str, const h5tool_format_t *info, hid_t container,
hid_t type, void *vp, h5tools_context_t *ctx)
{
size_t n, offset, size=0, nelmts, start;
char *name;
unsigned char *ucp_vp = (unsigned char *)vp;
char *cp_vp = (char *)vp;
hid_t memb, obj;
unsigned nmembs;
static char fmt_llong[8], fmt_ullong[8];
H5T_str_t pad;
/*
* some tempvars to store the value before we append it to the string to
* get rid of the memory alignment problem
*/
unsigned long long tempullong;
long long templlong;
unsigned long tempulong;
long templong;
unsigned int tempuint;
int tempint;
/* Build default formats for long long types */
if (!fmt_llong[0]) {
sprintf(fmt_llong, "%%%sd", H5_PRINTF_LL_WIDTH);
sprintf(fmt_ullong, "%%%su", H5_PRINTF_LL_WIDTH);
}
/* Append value depending on data type */
start = h5tools_str_len(str);
if (info->raw) {
size_t i;
n = H5Tget_size(type);
if (1 == n) {
h5tools_str_append(str, OPT(info->fmt_raw, "0x%02x"), ucp_vp[0]);
}
else {
for (i = 0; i < n; i++) {
if (i)
h5tools_str_append(str, ":");
h5tools_str_append(str, OPT(info->fmt_raw, "%02x"), ucp_vp[i]);
}
}
}
else if (H5Tequal(type, H5T_NATIVE_FLOAT)) {
float tempfloat;
HDmemcpy(&tempfloat, vp, sizeof(float));
h5tools_str_append(str, OPT(info->fmt_float, "%g"), tempfloat);
}
else if (H5Tequal(type, H5T_NATIVE_DOUBLE)) {
double tempdouble;
HDmemcpy(&tempdouble, vp, sizeof(double));
h5tools_str_append(str, OPT(info->fmt_double, "%g"), tempdouble);
#if H5_SIZEOF_LONG_DOUBLE !=0
}
else if (H5Tequal(type, H5T_NATIVE_LDOUBLE)) {
long double templdouble;
HDmemcpy(&templdouble, vp, sizeof(long double));
h5tools_str_append(str, "%Lf", templdouble);
#endif
}
else if (info->ascii && (H5Tequal(type, H5T_NATIVE_SCHAR) ||
H5Tequal(type, H5T_NATIVE_UCHAR))) {
h5tools_print_char(str, info, (char) (*ucp_vp));
}
else if (H5T_STRING == H5Tget_class(type)) {
unsigned int i;
char quote = '\0';
char *s;
quote = '\0';
if (H5Tis_variable_str(type)) {
/* cp_vp is the pointer into the struct where a `char*' is stored. So we have
* to dereference the pointer to get the `char*' to pass to HDstrlen(). */
s = *(char**) cp_vp;
if (s != NULL)
size = HDstrlen(s);
}
else {
s = cp_vp;
size = H5Tget_size(type);
}
pad = H5Tget_strpad(type);
/* Check for NULL pointer for string */
if (s == NULL) {
h5tools_str_append(str, "NULL");
}
else {
for (i = 0; i < size && (s[i] || pad != H5T_STR_NULLTERM); i++) {
int j = 1;
/*
* Count how many times the next character repeats. If the
* threshold is zero then that means it can repeat any number
* of times.
*/
if (info->str_repeat > 0)
while (i + j < size && s[i] == s[i + j])
j++;
/*
* Print the opening quote. If the repeat count is high enough to
* warrant printing the number of repeats instead of enumerating
* the characters, then make sure the character to be repeated is
* in it's own quote.
*/
if (info->str_repeat > 0 && j > info->str_repeat) {
if (quote)
h5tools_str_append(str, "%c", quote);
quote = '\'';
h5tools_str_append(str, "%s%c", i ? " " : "", quote);
}
else if (!quote) {
quote = '"';
h5tools_str_append(str, "%s%c", i ? " " : "", quote);
}
/* Print the character */
h5tools_print_char(str, info, s[i]);
/* Print the repeat count */
if (info->str_repeat && j > info->str_repeat) {
#ifdef REPEAT_VERBOSE
h5tools_str_append(str, "%c repeats %d times", quote, j - 1);
#else
h5tools_str_append(str, "%c*%d", quote, j - 1);
#endif /* REPEAT_VERBOSE */
quote = '\0';
i += j - 1;
}
}
if (quote)
h5tools_str_append(str, "%c", quote);
if (i == 0)
/*empty string*/
h5tools_str_append(str, "\"\"");
} /* end else */
}
else if (H5Tequal(type, H5T_NATIVE_INT)) {
HDmemcpy(&tempint, vp, sizeof(int));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempint = (tempint >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
}
else if (H5Tequal(type, H5T_NATIVE_UINT)) {
HDmemcpy(&tempuint, vp, sizeof(unsigned int));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempuint = (tempuint >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
}
else if (H5Tequal(type, H5T_NATIVE_SCHAR)) {
char tempchar;
HDmemcpy(&tempchar, cp_vp, sizeof(char));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempchar = (tempchar >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_schar, "%hhd"), tempchar);
}
else if (H5Tequal(type, H5T_NATIVE_UCHAR)) {
unsigned char tempuchar;
HDmemcpy(&tempuchar, ucp_vp, sizeof(unsigned char));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempuchar = (tempuchar >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_uchar, "%u"), tempuchar);
}
else if (H5Tequal(type, H5T_NATIVE_SHORT)) {
short tempshort;
HDmemcpy(&tempshort, vp, sizeof(short));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempshort = (tempshort >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_short, "%d"), tempshort);
}
else if (H5Tequal(type, H5T_NATIVE_USHORT)) {
unsigned short tempushort;
HDmemcpy(&tempushort, vp, sizeof(unsigned short));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempushort = (tempushort >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_ushort, "%u"), tempushort);
}
else if (H5Tequal(type, H5T_NATIVE_LONG)) {
HDmemcpy(&templong, vp, sizeof(long));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
templong = (templong >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
}
else if (H5Tequal(type, H5T_NATIVE_ULONG)) {
HDmemcpy(&tempulong, vp, sizeof(unsigned long));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempulong = (tempulong >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
}
else if (H5Tequal(type, H5T_NATIVE_LLONG)) {
HDmemcpy(&templlong, vp, sizeof(long long));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
templlong = (templlong >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
}
else if (H5Tequal(type, H5T_NATIVE_ULLONG)) {
HDmemcpy(&tempullong, vp, sizeof(unsigned long long));
#ifdef H5_HAVE_H5DUMP_PACKED_BITS
if(packed_bits_num) {
tempullong = (tempullong >> packed_data_offset) & packed_data_mask;
}
#endif
h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
}
else if (H5Tequal(type, H5T_NATIVE_HSSIZE)) {
if (sizeof(hssize_t) == sizeof(int)) {
memcpy(&tempint, vp, sizeof(int));
h5tools_str_append(str, OPT(info->fmt_int, "%d"), tempint);
}
else if (sizeof(hssize_t) == sizeof(long)) {
memcpy(&templong, vp, sizeof(long));
h5tools_str_append(str, OPT(info->fmt_long, "%ld"), templong);
}
else {
memcpy(&templlong, vp, sizeof(long long));
h5tools_str_append(str, OPT(info->fmt_llong, fmt_llong), templlong);
}
}
else if (H5Tequal(type, H5T_NATIVE_HSIZE)) {
if (sizeof(hsize_t) == sizeof(int)) {
memcpy(&tempuint, vp, sizeof(unsigned int));
h5tools_str_append(str, OPT(info->fmt_uint, "%u"), tempuint);
}
else if (sizeof(hsize_t) == sizeof(long)) {
memcpy(&tempulong, vp, sizeof(long));
h5tools_str_append(str, OPT(info->fmt_ulong, "%lu"), tempulong);
}
else {
memcpy(&tempullong, vp, sizeof(unsigned long long));
h5tools_str_append(str, OPT(info->fmt_ullong, fmt_ullong), tempullong);
}
}
else if (H5Tget_class(type) == H5T_COMPOUND) {
unsigned j;
nmembs = H5Tget_nmembers(type);
h5tools_str_append(str, "%s", OPT(info->cmpd_pre, "{"));
for (j = 0; j < nmembs; j++) {
if (j)
h5tools_str_append(str, "%s", OPT(info->cmpd_sep, ", " OPTIONAL_LINE_BREAK));
/* RPM 2000-10-31
* If the previous character is a line-feed (which is true when
* h5dump is running) then insert some white space for
* indentation. Be warned that column number calculations will be
* incorrect and that object indices at the beginning of the line
* will be missing (h5dump doesn't display them anyway). */
if (ctx->indent_level >= 0 && str->len && str->s[str->len - 1] == '\n') {
int x;
h5tools_str_append(str, OPT(info->line_pre, ""), "");
for (x = 0; x < ctx->indent_level + 1; x++)
h5tools_str_append(str, "%s", OPT(info->line_indent, ""));
}
/* The name */
name = H5Tget_member_name(type, j);
h5tools_str_append(str, OPT(info->cmpd_name, ""), name);
free(name);
/* The value */
offset = H5Tget_member_offset(type, j);
memb = H5Tget_member_type(type, j);
ctx->indent_level++;
h5tools_str_sprint(str, info, container, memb, cp_vp + offset, ctx);
ctx->indent_level--;
H5Tclose(memb);
}
/* RPM 2000-10-31
* If the previous character is a line feed (which is true when
* h5dump is running) then insert some white space for indentation.
* Be warned that column number calculations will be incorrect and
* that object indices at the beginning of the line will be missing
* (h5dump doesn't display them anyway). */
h5tools_str_append(str, "%s", OPT(info->cmpd_end, ""));
if (ctx->indent_level >= 0 && str->len && str->s[str->len - 1] == '\n') {
int x;
h5tools_str_append(str, OPT(info->line_pre, ""), "");
for (x = 0; x < ctx->indent_level; x++)
h5tools_str_append(str, "%s", OPT(info->line_indent, ""));
}
h5tools_str_append(str, "%s", OPT(info->cmpd_suf, "}"));
}
else if (H5Tget_class(type) == H5T_ENUM) {
char enum_name[1024];
if (H5Tenum_nameof(type, vp, enum_name, sizeof enum_name) >= 0) {
h5tools_str_append(str, h5tools_escape(enum_name, sizeof(enum_name)));
}
else {
size_t i;
n = H5Tget_size(type);
if (1 == n) {
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
}
else {
for (i = 0; i < n; i++)
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
}
}
}
else if (H5Tequal(type, H5T_STD_REF_DSETREG)) {
if (h5tools_str_is_zero(vp, H5Tget_size(type))) {
h5tools_str_append(str, "NULL");
}
else {
h5tools_str_sprint_region(str, info, container, vp);
}
}
else if (H5Tequal(type, H5T_STD_REF_OBJ)) {
/*
* Object references -- show the type and OID of the referenced
* object.
*/
if (h5tools_str_is_zero(vp, H5Tget_size(type))) {
h5tools_str_append(str, "NULL");
}
else {
H5O_info_t oi;
const char *path;
obj = H5Rdereference(container, H5R_OBJECT, vp);
H5Oget_info(obj, &oi);
/* Print object type and close object */
switch (oi.type) {
case H5O_TYPE_GROUP:
h5tools_str_append(str, H5_TOOLS_GROUP);
break;
case H5O_TYPE_DATASET:
h5tools_str_append(str, H5_TOOLS_DATASET);
break;
case H5O_TYPE_NAMED_DATATYPE:
h5tools_str_append(str, H5_TOOLS_DATATYPE);
break;
default:
h5tools_str_append(str, "%u-", (unsigned) oi.type);
break;
} /* end switch */
H5Oclose(obj);
/* Print OID */
if (info->obj_hidefileno)
h5tools_str_append(str, info->obj_format, oi.addr);
else
h5tools_str_append(str, info->obj_format, oi.fileno, oi.addr);
/* Print name */
path = lookup_ref_path(*(haddr_t *) vp);
if (path) {
h5tools_str_append(str, " ");
h5tools_str_append(str, path);
h5tools_str_append(str, " ");
} /* end if */
} /* end else */
}
else if (H5Tget_class(type) == H5T_ARRAY) {
int k, ndims;
hsize_t i, dims[H5S_MAX_RANK], temp_nelmts;
/* Get the array's base datatype for each element */
memb = H5Tget_super(type);
size = H5Tget_size(memb);
ndims = H5Tget_array_ndims(type);
H5Tget_array_dims2(type, dims);
assert(ndims >= 1 && ndims <= H5S_MAX_RANK);
/* Calculate the number of array elements */
for (k = 0, nelmts = 1; k < ndims; k++) {
temp_nelmts = nelmts;
temp_nelmts *= dims[k];
assert(temp_nelmts == (hsize_t) ((size_t) temp_nelmts));
nelmts = (size_t) temp_nelmts;
}
/* Print the opening bracket */
h5tools_str_append(str, "%s", OPT(info->arr_pre, "["));
for (i = 0; i < nelmts; i++) {
if (i)
h5tools_str_append(str, "%s", OPT(info->arr_sep, "," OPTIONAL_LINE_BREAK));
if (info->arr_linebreak && i && i % dims[ndims - 1] == 0) {
int x;
h5tools_str_append(str, "%s", "\n");
/* need to indent some more here*/
if (ctx->indent_level >= 0)
if (!info->pindex)
h5tools_str_append(str, "%s", OPT(info->line_pre, ""));
for (x = 0; x < ctx->indent_level + 1; x++)
h5tools_str_append(str, "%s", OPT(info->line_indent, ""));
} /* end if */
else if (i && info->arr_sep)
h5tools_str_append(str, " ");
ctx->indent_level++;
/* Dump the array element */
h5tools_str_sprint(str, info, container, memb, cp_vp + i * size, ctx);
ctx->indent_level--;
} /* end for */
/* Print the closing bracket */
h5tools_str_append(str, "%s", OPT(info->arr_suf, "]"));
H5Tclose(memb);
}
else if (H5Tget_class(type) == H5T_VLEN) {
unsigned int i;
/* Get the VL sequences's base datatype for each element */
memb = H5Tget_super(type);
size = H5Tget_size(memb);
/* Print the opening bracket */
h5tools_str_append(str, "%s", OPT(info->vlen_pre, "("));
/* Get the number of sequence elements */
nelmts = ((hvl_t *) cp_vp)->len;
for (i = 0; i < nelmts; i++) {
if (i)
h5tools_str_append(str, "%s", OPT(info->vlen_sep, "," OPTIONAL_LINE_BREAK));
#ifdef LATER
/* Need to fix so VL data breaks at correct location on end of line -QAK */
if (info->arr_linebreak && h5tools_str_len(str)>=info->line_ncols) {
int x;
h5tools_str_append(str, "%s", "\n");
/* need to indent some more here */
if (ctx->indent_level >= 0)
h5tools_str_append(str, "%s", OPT(info->line_pre, ""));
for (x = 0; x < ctx->indent_level + 1; x++)
h5tools_str_append(str,"%s",OPT(info->line_indent,""));
} /* end if */
#endif /* LATER */
ctx->indent_level++;
/* Dump the array element */
h5tools_str_sprint(str, info, container, memb,
((char *) (((hvl_t *) cp_vp)->p)) + i * size, ctx);
ctx->indent_level--;
} /* end for */
h5tools_str_append(str, "%s", OPT(info->vlen_suf, ")"));
H5Tclose(memb);
}
else {
/* All other types get printed as hexadecimal */
size_t i;
n = H5Tget_size(type);
if (1 == n) {
h5tools_str_append(str, "0x%02x", ucp_vp[0]);
}
else {
for (i = 0; i < n; i++)
h5tools_str_append(str, "%s%02x", i ? ":" : "", ucp_vp[i]);
}
}
return h5tools_str_fmt(str, start, OPT(info->elmt_fmt, "%s"));
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_sprint_region
*
* Purpose: Dataset region reference -- show the type and data of the referenced object.
*
* Return: Nothing
*-------------------------------------------------------------------------
*/
void
h5tools_str_sprint_region(h5tools_str_t *str, const h5tool_format_t *info,
hid_t container, void *vp)
{
hid_t obj, region;
char ref_name[1024];
H5S_sel_type region_type;
obj = H5Rdereference(container, H5R_DATASET_REGION, vp);
if (obj >= 0) {
region = H5Rget_region(container, H5R_DATASET_REGION, vp);
if (region >= 0) {
H5Rget_name(obj, H5R_DATASET_REGION, vp, (char*) ref_name, 1024);
h5tools_str_append(str, info->dset_format, ref_name);
h5tools_str_append(str, "{");
region_type = H5Sget_select_type(region);
if(region_type==H5S_SEL_POINTS)
h5tools_str_dump_region_points(str, region, info);
else
h5tools_str_dump_region_blocks(str, region, info);
h5tools_str_append(str, "}");
H5Sclose(region);
} /* end if (region >= 0) */
H5Dclose(obj);
} /* end if (obj >= 0) */
}
/*-------------------------------------------------------------------------
* Function: h5tools_escape
*
* Purpose: Changes all "funny" characters in S into standard C escape
* sequences.
*
* Return: Success: S
*
* Failure: NULL if the buffer would overflow. The
* buffer has as many left-to-right escapes as
* possible before overflow would have happened.
*
* Programmer: Robb Matzke
* Monday, April 26, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static char *
h5tools_escape(char *s/*in,out*/, size_t size)
{
register size_t i;
size_t n = strlen(s);
const char *escape;
char octal[8];
for (i = 0; i < n; i++) {
switch (s[i]) {
case '\'':
escape = "\\\'";
break;
case '\"':
escape = "\\\"";
break;
case '\\':
escape = "\\\\";
break;
case '\?':
escape = "\\\?";
break;
case '\a':
escape = "\\a";
break;
case '\b':
escape = "\\b";
break;
case '\f':
escape = "\\f";
break;
case '\n':
escape = "\\n";
break;
case '\r':
escape = "\\r";
break;
case '\t':
escape = "\\t";
break;
case '\v':
escape = "\\v";
break;
default:
if (!isprint(s[i])) {
sprintf(octal, "\\%03o", (unsigned char) s[i]);
escape = octal;
}
else {
escape = NULL;
}
break;
}
if (escape) {
size_t esc_size = strlen(escape);
if (n + esc_size + 1 > size)
/*would overflow*/
return NULL;
memmove(s + i + esc_size, s + i + 1, n - i); /*make room*/
memcpy(s + i, escape, esc_size); /*insert*/
n += esc_size - 1; /* adjust total string size */
i += esc_size; /* adjust string position */
}
}
return s;
}
/*-------------------------------------------------------------------------
* Function: h5tools_str_is_zero
*
* Purpose: Determines if memory is initialized to all zero bytes.
*
* Return: TRUE if all bytes are zero; FALSE otherwise
*
* Programmer: Robb Matzke
* Monday, June 7, 1999
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
static hbool_t
h5tools_str_is_zero(const void *_mem, size_t size)
{
const unsigned char *mem = (const unsigned char *) _mem;
while (size-- > 0)
if (mem[size])
return FALSE;
return TRUE;
}
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