ddf2b95cbd
bug fixes Description: 1) the option logic for the print of long types was done incorrectly (extra lines of code that were not supposed to be there) 2) the print of loong long types was incorrect Solution: 1) removed the incorrect code 2) made a long long cast on the printf call Platforms tested: linux (32 and 64) solaris Misc. update:
495 lines
14 KiB
Bash
Executable File
495 lines
14 KiB
Bash
Executable File
#! /bin/sh
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#
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# Copyright by the Board of Trustees of the University of Illinois.
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# All rights reserved.
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#
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# This file is part of HDF5. The full HDF5 copyright notice, including
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# terms governing use, modification, and redistribution, is contained in
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# the files COPYING and Copyright.html. COPYING can be found at the root
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# of the source code distribution tree; Copyright.html can be found at the
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# root level of an installed copy of the electronic HDF5 document set and
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# is linked from the top-level documents page. It can also be found at
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# http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have
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# access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu.
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#
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# Tests for the h5diff tool
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#
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# Modification:
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# Albert Cheng, 2005/08/17
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# Added the SKIP feature.
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# Albert Cheng, 2005/2/3
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# Added -p option for parallel h5diff tests.
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# Pedro Vicente Nunes, 10/25/2005
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# Added test #9
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H5DIFF=h5diff # The tool name
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H5DIFF_BIN=`pwd`/$H5DIFF # The path of the tool binary
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CMP='cmp -s'
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DIFF='diff -c'
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nerrors=0
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verbose=yes
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pmode= # default to run h5diff tests
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# The build (current) directory might be different than the source directory.
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if test -z "$srcdir"; then
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srcdir=.
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fi
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test -d ../testfiles || mkdir ../testfiles
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# Parse option
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# -p run ph5diff tests
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# -h print help page
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while [ $# -gt 0 ]; do
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case "$1" in
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-p) # run ph5diff tests
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H5DIFF_BIN=`pwd`/ph5diff
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pmode=yes
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shift
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;;
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-h) # print help page
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echo "$0 [-p] [-h]"
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echo " -p run ph5diff tests"
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echo " -h print help page"
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shift
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exit 0
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;;
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*) # unknown option
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echo "$0: Unknown option ($1)"
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exit 1
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;;
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esac
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done
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# Print a line-line message left justified in a field of 70 characters
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# beginning with the word "Testing".
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#
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TESTING() {
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SPACES=" "
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echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012'
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}
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# Some systems will dump some messages to stdout for various reasons.
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# Remove them from the stdout result file.
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# $1 is the file name of the file to be filtered.
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# Cases of filter needed:
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# 1. Sandia Red-Storm
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# yod always prints these two lines at the beginning.
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# LibLustre: NAL NID: 0004a605 (5)
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# Lustre: OBD class driver Build Version: 1, info@clusterfs.com
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# 2. LANL Lambda
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# mpijob mirun -np always add an extra line at the end like:
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# P4 procgroup file is /users/acheng/.lsbatch/host10524.l82
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STDOUT_FILTER() {
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result_file=$1
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tmp_file=/tmp/h5test_tmp_$$
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# Filter Sandia Red-Storm yod messages.
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cp $result_file $tmp_file
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sed -e '/^LibLustre:/d' -e '/^Lustre:/d' \
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< $tmp_file > $result_file
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# Filter LANL Lambda mpirun message.
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cp $result_file $tmp_file
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sed -e '/^P4 procgroup file is/d' \
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< $tmp_file > $result_file
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# cleanup
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rm -f $tmp_file
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}
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# Some systems will dump some messages to stderr for various reasons.
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# Remove them from the stderr result file.
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# $1 is the file name of the file to be filtered.
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# Cases of filter needed:
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# 1. MPE:
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# In parallel mode and if MPE library is used, it prints the following
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# two message lines whether the MPE tracing is used or not.
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# Writing logfile.
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# Finished writing logfile.
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# 2. LANL MPI:
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# The LANL MPI will print some messages like the following,
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# LA-MPI: *** mpirun (1.5.10)
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# LA-MPI: *** 3 process(es) on 2 host(s): 2*fln21 1*fln22
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# LA-MPI: *** libmpi (1.5.10)
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# LA-MPI: *** Copyright 2001-2004, ACL, Los Alamos National Laboratory
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# 3. h5diff debug output:
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# Debug output all have prefix "h5diff debug: ".
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STDERR_FILTER() {
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result_file=$1
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tmp_file=/tmp/h5test_tmp_$$
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# Filter MPE messages
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if test -n "$pmode"; then
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cp $result_file $tmp_file
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sed -e '/^Writing logfile./d' -e '/^Finished writing logfile./d' \
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< $tmp_file > $result_file
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fi
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# Filter LANL MPI messages
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# and LLNL srun messages
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if test -n "$pmode"; then
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cp $result_file $tmp_file
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sed -e '/^LA-MPI:/d' -e '/^srun:/d' \
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< $tmp_file > $result_file
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fi
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# Filter h5diff debug output
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cp $result_file $tmp_file
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sed -e '/^h5diff debug: /d' \
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< $tmp_file > $result_file
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# clean up temporary files.
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rm -f $tmp_file
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}
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# Run a test and print PASS or *FAIL*. If a test fails then increment
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# the `nerrors' global variable and (if $verbose is set) display the
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# difference between the actual output and the expected output. The
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# expected output is given as the first argument to this function and
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# the actual output file is calculated by replacing the `.ddl' with
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# `.out'. The actual output is not removed if $HDF5_NOCLEANUP has a
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# non-zero value.
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#
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# Need eval before the RUNCMD command because some machines like
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# AIX, has RUNPARALLEL in the style as
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# MP_PROCS=3 MP_TASKS_PER_NODE=3 poe ./a.out
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# that throws the shell script off.
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#
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TOOLTEST() {
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expect="$srcdir/../testfiles/$1"
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actual="../testfiles/`basename $1 .txt`.out"
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actual_err="../testfiles/`basename $1 .txt`.err"
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actual_sav=${actual}-sav
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actual_err_sav=${actual_err}-sav
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shift
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if test -n "$pmode"; then
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RUNCMD=$RUNPARALLEL
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else
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RUNCMD=$RUNSERIAL
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fi
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# Run test.
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# Tflops interprets "$@" as "" when no parameter is given (e.g., the
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# case of missing file name). Changed it to use $@ till Tflops fixes it.
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TESTING $H5DIFF $@
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(
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echo "#############################"
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echo "Expected output for '$H5DIFF $@'"
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echo "#############################"
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cd $srcdir/../testfiles
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if [ "`uname -s`" = "TFLOPS O/S" ]; then
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eval $RUNCMD $H5DIFF_BIN $@
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else
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eval $RUNCMD $H5DIFF_BIN "$@"
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fi
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) >$actual 2>$actual_err
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# save actual and actual_err in case they are needed later.
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cp $actual $actual_sav
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STDOUT_FILTER $actual
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cp $actual_err $actual_err_sav
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STDERR_FILTER $actual_err
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cat $actual_err >> $actual
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if [ ! -f $expect ]; then
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# Create the expect file if it doesn't yet exist.
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echo " CREATED"
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cp $actual $expect
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elif $CMP $expect $actual; then
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echo " PASSED"
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elif test -z "$pmode"; then
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echo "*FAILED*"
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echo " Expected result ($expect) differs from actual result ($actual)"
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nerrors="`expr $nerrors + 1`"
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test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
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else
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# parallel mode output are often of different ordering from serial
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# output. If the sorted expected and actual files compare the same,
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# it is safe to assume the actual output match the expected file.
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expect_sorted=expect_sorted
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actual_sorted=actual_sorted
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sort $expect -o $expect_sorted
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sort $actual -o $actual_sorted
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if $CMP $expect_sorted $actual_sorted; then
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echo " PASSED"
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else
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echo "*FAILED*"
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nerrors="`expr $nerrors + 1`"
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if test yes = "$verbose"; then
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echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)"
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$DIFF $expect_sorted $actual_sorted |sed 's/^/ /'
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echo "====The actual output ($actual_sav)"
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sed 's/^/ /' < $actual_sav
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echo "====The actual stderr ($actual_err_sav)"
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sed 's/^/ /' < $actual_err_sav
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echo "====End of actual stderr ($actual_err_sav)"
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echo ""
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fi
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fi
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fi
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# Clean up output file
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if test -z "$HDF5_NOCLEANUP"; then
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rm -f $actual $actual_err $actual_sav $actual_err_sav
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rm -f $actual_sorted $expect_sorted
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fi
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}
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# Print a "SKIP" message
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SKIP() {
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TESTING $H5DIFF $@
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echo " -SKIP-"
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}
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##############################################################################
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##############################################################################
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### T H E T E S T S ###
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##############################################################################
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##############################################################################
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# ##############################################################################
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# # Common usage
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# ##############################################################################
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# 1.0
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TOOLTEST h5diff_10.txt -h
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# 1.1 normal mode
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TOOLTEST h5diff_11.txt file1.h5 file2.h5
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# 1.2 normal mode with objects
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TOOLTEST h5diff_12.txt file1.h5 file2.h5 g1/dset1 g1/dset2
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# 1.3 report mode
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TOOLTEST h5diff_13.txt file1.h5 file2.h5 -r
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# 1.4 report mode with objects
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TOOLTEST h5diff_14.txt file1.h5 file2.h5 -r g1/dset1 g1/dset2
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# 1.5 with -d
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TOOLTEST h5diff_15.txt file1.h5 file2.h5 -r -d 5 g1/dset3 g1/dset4
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# 1.6 with -p
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TOOLTEST h5diff_16.txt file1.h5 file2.h5 -r -p 0.05 g1/dset3 g1/dset4
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# 1.7 verbose mode
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TOOLTEST h5diff_17.txt file1.h5 file2.h5 -v
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# 1.8 quiet mode
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TOOLTEST h5diff_18.txt file1.h5 file2.h5 -q
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# ##############################################################################
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# # not comparable types
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# ##############################################################################
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# 2.0
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TOOLTEST h5diff_20.txt file3.h5 file3.h5 -v dset g1
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# 2.1
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TOOLTEST h5diff_21.txt file3.h5 file3.h5 -v dset l1
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# 2.2
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TOOLTEST h5diff_22.txt file3.h5 file3.h5 -v dset t1
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# ##############################################################################
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# # compare groups, types, links (no differences and differences)
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# ##############################################################################
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# 2.3
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TOOLTEST h5diff_23.txt file3.h5 file3.h5 -v g1 g1
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# 2.4
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TOOLTEST h5diff_24.txt file3.h5 file3.h5 -v t1 t1
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# 2.5
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TOOLTEST h5diff_25.txt file3.h5 file3.h5 -v l1 l1
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# 2.6
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TOOLTEST h5diff_26.txt file3.h5 file3.h5 -v g1 g2
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# 2.7
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TOOLTEST h5diff_27.txt file3.h5 file3.h5 -v t1 t2
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# 2.8
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TOOLTEST h5diff_28.txt file3.h5 file3.h5 -v l1 l2
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# ##############################################################################
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# # Dataset types
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# ##############################################################################
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# 5.0
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TOOLTEST h5diff_50.txt file4.h5 file4.h5 -v dset0a dset0b
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# 5.1
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TOOLTEST h5diff_51.txt file4.h5 file4.h5 -v dset1a dset1b
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# 5.2
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TOOLTEST h5diff_52.txt file4.h5 file4.h5 -v dset2a dset2b
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# 5.3
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TOOLTEST h5diff_53.txt file4.h5 file4.h5 -v dset3a dset4b
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# 5.4
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TOOLTEST h5diff_54.txt file4.h5 file4.h5 -v dset4a dset4b
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# 5.5
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TOOLTEST h5diff_55.txt file4.h5 file4.h5 -v dset5a dset5b
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# 5.6
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TOOLTEST h5diff_56.txt file4.h5 file4.h5 -v dset6a dset6b
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# 5.7
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TOOLTEST h5diff_57.txt file4.h5 file4.h5 -v dset7a dset7b
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# 5.8 long_long test; different format of long_long print in Linux and IRIX
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#TOOLTEST h5diff_58.txt file4.h5 file4.h5 dset8a dset8b
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# ##############################################################################
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# # Error messages
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# ##############################################################################
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# 6.0: Check if the command line number of arguments is less than 3
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TOOLTEST h5diff_600.txt file1.h5
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# 6.1: Check for invalid options
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TOOLTEST h5diff_601.txt file1.h5 file2.h5 -x
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# ##############################################################################
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# # -d
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# ##############################################################################
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# 6.2: no value
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TOOLTEST h5diff_602.txt file1.h5 file2.h5 -d g1/dset3 g1/dset4
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# 6.3: negative value
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TOOLTEST h5diff_603.txt file1.h5 file2.h5 -d -4 g1/dset3 g1/dset4
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# 6.4: zero
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TOOLTEST h5diff_604.txt file1.h5 file2.h5 -d 0 g1/dset3 g1/dset4
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# 6.5: non number
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TOOLTEST h5diff_605.txt file1.h5 file2.h5 -d u g1/dset3 g1/dset4
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# 6.6: hexadecimal
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TOOLTEST h5diff_606.txt file1.h5 file2.h5 -d 0x1 g1/dset3 g1/dset4
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# 6.7: string
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TOOLTEST h5diff_607.txt file1.h5 file2.h5 -d "1" g1/dset3 g1/dset4
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# 6.8: repeated option
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TOOLTEST h5diff_608.txt file1.h5 file2.h5 -d 1 -d 2 g1/dset3 g1/dset4
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# 6.9: number larger than biggest difference
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TOOLTEST h5diff_609.txt file1.h5 file2.h5 -d 200 g1/dset3 g1/dset4
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# 6.10: number smaller than smallest difference
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TOOLTEST h5diff_610.txt file1.h5 file2.h5 -d 1 g1/dset3 g1/dset4
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# ##############################################################################
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# # -p
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# ##############################################################################
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# 6.11: no value
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TOOLTEST h5diff_611.txt file1.h5 file2.h5 -r -p g1/dset3 g1/dset4
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# 6.12: negative value
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TOOLTEST h5diff_612.txt file1.h5 file2.h5 -p -4 g1/dset3 g1/dset4
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# 6.13: zero
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TOOLTEST h5diff_613.txt file1.h5 file2.h5 -p 0 g1/dset3 g1/dset4
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# 6.14: non number
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TOOLTEST h5diff_614.txt file1.h5 file2.h5 -p u g1/dset3 g1/dset4
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# 6.15: hexadecimal
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TOOLTEST h5diff_615.txt file1.h5 file2.h5 -p 0x1 g1/dset3 g1/dset4
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# 6.16: string
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TOOLTEST h5diff_616.txt file1.h5 file2.h5 -p "0.21" g1/dset3 g1/dset4
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# 6.17: repeated option
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TOOLTEST h5diff_617.txt file1.h5 file2.h5 -p 0.21 -p 0.22 g1/dset3 g1/dset4
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# 6.18: number larger than biggest difference
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TOOLTEST h5diff_618.txt file1.h5 file2.h5 -p 2 g1/dset3 g1/dset4
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# 6.19: number smaller than smallest difference
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TOOLTEST h5diff_619.txt file1.h5 file2.h5 -p 0.005 g1/dset3 g1/dset4
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# ##############################################################################
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# # -n
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# ##############################################################################
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# 6.20: no value
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TOOLTEST h5diff_620.txt file1.h5 file2.h5 -n g1/dset3 g1/dset4
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# 6.21: negative value
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TOOLTEST h5diff_621.txt file1.h5 file2.h5 -n -4 g1/dset3 g1/dset4
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# 6.22: zero
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TOOLTEST h5diff_622.txt file1.h5 file2.h5 -n 0 g1/dset3 g1/dset4
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# 6.23: non number
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TOOLTEST h5diff_623.txt file1.h5 file2.h5 -n u g1/dset3 g1/dset4
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# 6.24: hexadecimal
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TOOLTEST h5diff_624.txt file1.h5 file2.h5 -n 0x1 g1/dset3 g1/dset4
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# 6.25: string
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TOOLTEST h5diff_625.txt file1.h5 file2.h5 -n "2" g1/dset3 g1/dset4
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# 6.26: repeated option
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TOOLTEST h5diff_626.txt file1.h5 file2.h5 -n 2 -n 3 g1/dset3 g1/dset4
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# 6.27: number larger than biggest difference
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TOOLTEST h5diff_627.txt file1.h5 file2.h5 -n 200 g1/dset3 g1/dset4
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# 6.28: number smaller than smallest difference
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TOOLTEST h5diff_628.txt file1.h5 file2.h5 -n 1 g1/dset3 g1/dset4
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# ##############################################################################
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# 6.29 non valid files
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# ##############################################################################
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TOOLTEST h5diff_629.txt file1.h6 file2.h6
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# ##############################################################################
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# 7. attributes
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# ##############################################################################
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TOOLTEST h5diff_70.txt file5.h5 file6.h5 -v
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# ##############################################################################
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# 8. all dataset datatypes
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# ##############################################################################
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TOOLTEST h5diff_80.txt file7.h5 file8.h5 -v
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# 9. compare a file with itself
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TOOLTEST h5diff_90.txt file1.h5 file1.h5
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# ##############################################################################
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# # END
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# ##############################################################################
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if test $nerrors -eq 0 ; then
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echo "All $H5DIFF tests passed."
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fi
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exit $nerrors
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