* Normalization with develop * Removes checks and work-arounds for strtoll and strtoull (#769) * Removes checks for (v)snprintf, which are C99 (#772) * Update missing release note info. (#776) * Replaces the H5_OVERRIDE macro with override (#773) The macro is no longer necessary now that we require C++11. * Cleans up some POSIX header bits in H5private.h (#783) * Removes outdated checks for ways inline might be defined (#781) These are obsolete now that we require C99. * Removes checks for system(), which is C89/90 (#782) * Removes C++ dependency on H5private.h (#774) * Removes C++ dependency on H5private.h Most C API calls have been removed, aside from a few uses of free, where we just dropped the 'HD'. A couple of H5_ATTR_UNUSED macros were also replaced with (void) statements. * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Further simplifies Autotools type size checks (#789) Also fixes an issue where clock_gettime and difftime are not detected due to earlier simplifications of this code. * Release Note (#784) * Normalization of CMake H5pubconf.h with Autotools (#791) Mostly just moving things around and changing the comments to keep the delta small. The only symbol change is that for curl/curl.h which I changed to H5_HAVE_CURL_CURL_H to match the Autotools. This symbol is not used in the library and is just an artifact of the checks. * Fix tools test (#794) * Removes ancient Autotools cruft (#790) * Reorganization of C and POSIX headers in H5public.h & H5private.h (#793) * Reorganization of C and POSIX headers in H5public.h & H5private.h Consolidated and removed duplicates * It turns out Windows has sys/types.h Co-authored-by: Larry Knox <lrknox@hdfgroup.org> * Removes checks for signal and set/longjmp, which are C89 (#798) Also removes checks for setjmp.h and stddef.h * Assume frexpl/f and fabsl/f, which are C99 (#799) * Assume the library has C99 types in C++ type code (#806) * Assume the library has C99 types in C++ type code * Committing clang-format changes Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Removes obsolete equivalents of C99's __func__ (#800) * Cleans up POSIX/C bits in H5private.h (#804) * Cleans up POSIX/C bits in H5private.h * Assume difftime exists (C89) * Reorg AC_CHECK_HEADERS so headers are in alphabetical order * Split off networking-related AC_CHECK_HEADERS * Remove unused UNAME_CYGWIN from configure.ac * Remove checks for unused sys/timeb.h * Tidying pass over H5private.h HD prefix macros * Tidy H5win32defs.h * Add HD prefix to various scanf calls * Committing clang-format changes * Fixes to the alarm(2) code used in the tests to make Windows happy Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> * Brings the tools getopt(3) replacement into the main library (#803) * Moves get_option from the tools library to the C library * Adds H5 prefix to get_option call and variables * Renames the H5_get_option long options struct and enum * Removes type guesses when C99 types are missing (#807) * Assume C99 types exist in H5detect.c (#808) * Fixes parallel issues from recent C99 changes * Adds MPE FUNC --> __func__ changes missed in earlier PRs * Fix typo * Fixes parallel issues from recent C99 changes (#809) * Fixes parallel issues from recent C99 changes * Adds MPE FUNC --> __func__ changes missed in earlier PRs * Even more missed FUNC --> __func__ macros * Removes remaining H5_TIME_WITH_SYS_TIME cruft (#810) Mostly from CMake * Merges with develop * Committing clang-format changes * Normalization with develop * direct_chunk test and H5Dget_chunk_storage_size changes * Removes unused H5O call * Brings some dataspace changes from the combo branch merge Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
378 lines
12 KiB
C
378 lines
12 KiB
C
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
|
|
* Copyright by The HDF Group. *
|
|
* Copyright by the Board of Trustees of the University of Illinois. *
|
|
* All rights reserved. *
|
|
* *
|
|
* This file is part of HDF5. The full HDF5 copyright notice, including *
|
|
* terms governing use, modification, and redistribution, is contained in *
|
|
* the COPYING file, which can be found at the root of the source code *
|
|
* distribution tree, or in https://www.hdfgroup.org/licenses. *
|
|
* If you do not have access to either file, you may request a copy from *
|
|
* help@hdfgroup.org. *
|
|
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
|
|
|
|
/*
|
|
* Programmer: Raymond Lu
|
|
* Thursday, March 23, 2006
|
|
*
|
|
* Purpose: Check if floating-point data created on big-endian and
|
|
* little-endian machines can be read on the machine running this test.
|
|
*/
|
|
|
|
#include "h5test.h"
|
|
#include "H5srcdir.h"
|
|
|
|
const char *FILENAME[] = {"vms_data", "le_data", "be_data", NULL};
|
|
|
|
#define DATASETNAME "Array_le"
|
|
#define DATASETNAME1 "Array_be"
|
|
#define DATASETNAME2 "Scale_offset_float_data_le"
|
|
#define DATASETNAME3 "Scale_offset_float_data_be"
|
|
#define DATASETNAME4 "Scale_offset_double_data_le"
|
|
#define DATASETNAME5 "Scale_offset_double_data_be"
|
|
#define DATASETNAME6 "Scale_offset_char_data_le"
|
|
#define DATASETNAME7 "Scale_offset_char_data_be"
|
|
#define DATASETNAME8 "Scale_offset_short_data_le"
|
|
#define DATASETNAME9 "Scale_offset_short_data_be"
|
|
#define DATASETNAME10 "Scale_offset_int_data_le"
|
|
#define DATASETNAME11 "Scale_offset_int_data_be"
|
|
#define DATASETNAME12 "Scale_offset_long_long_data_le"
|
|
#define DATASETNAME13 "Scale_offset_long_long_data_be"
|
|
|
|
#define DATASETNAME14 "Fletcher_float_data_le"
|
|
#define DATASETNAME15 "Fletcher_float_data_be"
|
|
#ifdef H5_HAVE_FILTER_DEFLATE
|
|
#define DATASETNAME16 "Deflate_float_data_le"
|
|
#define DATASETNAME17 "Deflate_float_data_be"
|
|
#endif
|
|
#ifdef H5_HAVE_FILTER_SZIP
|
|
#define DATASETNAME18 "Szip_float_data_le"
|
|
#define DATASETNAME19 "Szip_float_data_be"
|
|
#endif /* H5_HAVE_FILTER_SZIP */
|
|
#define DATASETNAME20 "Shuffle_float_data_le"
|
|
#define DATASETNAME21 "Shuffle_float_data_be"
|
|
#define DATASETNAME22 "Nbit_float_data_le"
|
|
#define DATASETNAME23 "Nbit_float_data_be"
|
|
|
|
#define NX 6
|
|
#define NY 6
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: check_data_i
|
|
*
|
|
* Purpose: Read and compare the integer data from a dataset.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
* Programmer: Raymond Lu
|
|
* 17 May 2011
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
check_data_i(const char *dsetname, hid_t fid)
|
|
{
|
|
hid_t did = -1; /* dataset ID */
|
|
long long data_in[NX + 1][NY]; /* input buffer */
|
|
long long data_out[NX + 1][NY]; /* output buffer */
|
|
int i, j; /* iterators */
|
|
int nerrors = 0; /* # errors in dataset values */
|
|
|
|
/* Open the dataset. */
|
|
if ((did = H5Dopen2(fid, dsetname, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Initialization. */
|
|
/* Input (last row is different) */
|
|
for (i = 0; i < NX; i++)
|
|
for (j = 0; j < NY; j++)
|
|
data_in[i][j] = i + j;
|
|
for (i = 0; i < NY; i++)
|
|
data_in[NX][i] = -2;
|
|
/* Output */
|
|
HDmemset(data_out, 0, (NX + 1) * NY * sizeof(long long));
|
|
|
|
/* Read data from hyperslab in the file into the hyperslab in
|
|
* memory and display.
|
|
*/
|
|
if (H5Dread(did, H5T_NATIVE_LLONG, H5S_ALL, H5S_ALL, H5P_DEFAULT, data_out) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Check results */
|
|
for (i = 0; i < (NX + 1); i++)
|
|
for (j = 0; j < NY; j++)
|
|
if (data_out[i][j] != data_in[i][j])
|
|
if (!nerrors++) {
|
|
H5_FAILED();
|
|
HDprintf("element [%d][%d] is %lld but should have been %lld\n", (int)i, (int)j,
|
|
data_out[i][j], data_in[i][j]);
|
|
} /* end if */
|
|
|
|
/* Close/release resources. */
|
|
if (H5Dclose(did) < 0)
|
|
FAIL_STACK_ERROR
|
|
|
|
/* Failure */
|
|
if (nerrors) {
|
|
HDprintf("total of %d errors out of %d elements\n", nerrors, (int)(NX * NY));
|
|
return 1;
|
|
} /* end if */
|
|
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(did);
|
|
}
|
|
H5E_END_TRY;
|
|
return 1;
|
|
} /* end check_data_i() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: check_data_f
|
|
*
|
|
* Purpose: Read and compare the floating-point data from a dataset.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: 1
|
|
*
|
|
* Programmer: Raymond Lu
|
|
* 17 May 2011
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
check_data_f(const char *dsetname, hid_t fid)
|
|
{
|
|
hid_t did = -1; /* dataset ID */
|
|
double data_in[NX + 1][NY]; /* input buffer */
|
|
double data_out[NX + 1][NY]; /* output buffer */
|
|
int i, j; /* iterators */
|
|
int nerrors = 0; /* # of errors in dataset values */
|
|
|
|
/* Open the dataset. */
|
|
if ((did = H5Dopen2(fid, dsetname, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Initialization. */
|
|
/* Input (last row is different) */
|
|
for (i = 0; i < NX; i++)
|
|
for (j = 0; j < NY; j++)
|
|
data_in[i][j] = ((double)(i + j + 1)) / 3.0;
|
|
for (i = 0; i < NY; i++)
|
|
data_in[NX][i] = -2.2;
|
|
/* Output */
|
|
HDmemset(data_out, 0, (NX + 1) * NY * sizeof(double));
|
|
|
|
/* Read data from hyperslab in the file into the hyperslab in
|
|
* memory and display.
|
|
*/
|
|
if (H5Dread(did, H5T_NATIVE_DOUBLE, H5S_ALL, H5S_ALL, H5P_DEFAULT, data_out) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
/* Check results */
|
|
for (i = 0; i < (NX + 1); i++)
|
|
for (j = 0; j < NY; j++)
|
|
if (!H5_DBL_REL_EQUAL(data_out[i][j], data_in[i][j], 0.001))
|
|
if (!nerrors++) {
|
|
H5_FAILED();
|
|
HDprintf("element [%d][%d] is %g but should have been %g\n", (int)i, (int)j,
|
|
data_out[i][j], data_in[i][j]);
|
|
} /* end if */
|
|
|
|
/* Close/release resources. */
|
|
if (H5Dclose(did) < 0)
|
|
FAIL_STACK_ERROR
|
|
|
|
/* Failure */
|
|
if (nerrors) {
|
|
HDprintf("total of %d errors out of %d elements\n", nerrors, (int)(NX * NY));
|
|
return 1;
|
|
} /* end if */
|
|
|
|
PASSED();
|
|
return 0;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Dclose(did);
|
|
}
|
|
H5E_END_TRY;
|
|
return 1;
|
|
} /* end check_data_f() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: check_file
|
|
*
|
|
* Purpose: Handle each dataset from the data file.
|
|
*
|
|
* Return: Success: 0
|
|
* Failure: Number of failures
|
|
*
|
|
* Programmer: Raymond Lu
|
|
* 21 January 2011
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
static int
|
|
check_file(char *filename)
|
|
{
|
|
const char *pathname = H5_get_srcdir_filename(filename); /* Corrected test file name */
|
|
hid_t fid = -1; /* file ID */
|
|
int nerrors = 0; /* # of datasets with errors */
|
|
#if !defined(H5_HAVE_FILTER_DEFLATE) || !defined(H5_HAVE_FILTER_SZIP)
|
|
const char *not_supported = " filter is not enabled."; /* no filter message */
|
|
#endif
|
|
|
|
/* Open the file. */
|
|
if ((fid = H5Fopen(pathname, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0)
|
|
FAIL_STACK_ERROR;
|
|
|
|
TESTING("regular dataset of LE DOUBLE");
|
|
nerrors += check_data_f(DATASETNAME, fid);
|
|
|
|
TESTING("regular dataset of BE DOUBLE");
|
|
nerrors += check_data_f(DATASETNAME1, fid);
|
|
|
|
TESTING("dataset of LE FLOAT with scale-offset filter");
|
|
nerrors += check_data_f(DATASETNAME2, fid);
|
|
|
|
TESTING("dataset of BE FLOAT with scale-offset filter");
|
|
nerrors += check_data_f(DATASETNAME3, fid);
|
|
|
|
TESTING("dataset of LE DOUBLE with scale-offset filter");
|
|
nerrors += check_data_f(DATASETNAME4, fid);
|
|
|
|
TESTING("dataset of BE DOUBLE with scale-offset filter");
|
|
nerrors += check_data_f(DATASETNAME5, fid);
|
|
|
|
TESTING("dataset of LE CHAR with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME6, fid);
|
|
|
|
TESTING("dataset of BE CHAR with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME7, fid);
|
|
|
|
TESTING("dataset of LE SHORT with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME8, fid);
|
|
|
|
TESTING("dataset of BE SHORT with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME9, fid);
|
|
|
|
TESTING("dataset of LE INT with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME10, fid);
|
|
|
|
TESTING("dataset of BE INT with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME11, fid);
|
|
|
|
TESTING("dataset of LE LONG LONG with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME12, fid);
|
|
|
|
TESTING("dataset of BE LONG LONG with scale-offset filter");
|
|
nerrors += check_data_i(DATASETNAME13, fid);
|
|
|
|
TESTING("dataset of LE FLOAT with Fletcher32 filter");
|
|
nerrors += check_data_f(DATASETNAME14, fid);
|
|
|
|
TESTING("dataset of BE FLOAT with Fletcher32 filter");
|
|
nerrors += check_data_f(DATASETNAME15, fid);
|
|
|
|
TESTING("dataset of LE FLOAT with Deflate filter");
|
|
#ifdef H5_HAVE_FILTER_DEFLATE
|
|
nerrors += check_data_f(DATASETNAME16, fid);
|
|
#else /*H5_HAVE_FILTER_DEFLATE*/
|
|
SKIPPED();
|
|
HDputs(not_supported);
|
|
#endif /*H5_HAVE_FILTER_DEFLATE*/
|
|
|
|
TESTING("dataset of BE FLOAT with Deflate filter");
|
|
#ifdef H5_HAVE_FILTER_DEFLATE
|
|
nerrors += check_data_f(DATASETNAME17, fid);
|
|
#else /*H5_HAVE_FILTER_DEFLATE*/
|
|
SKIPPED();
|
|
HDputs(not_supported);
|
|
#endif /*H5_HAVE_FILTER_DEFLATE*/
|
|
|
|
TESTING("dataset of LE FLOAT with Szip filter");
|
|
#ifdef H5_HAVE_FILTER_SZIP
|
|
nerrors += check_data_f(DATASETNAME18, fid);
|
|
#else /*H5_HAVE_FILTER_SZIP*/
|
|
SKIPPED();
|
|
HDputs(not_supported);
|
|
#endif /*H5_HAVE_FILTER_SZIP*/
|
|
|
|
TESTING("dataset of BE FLOAT with Szip filter");
|
|
#ifdef H5_HAVE_FILTER_SZIP
|
|
nerrors += check_data_f(DATASETNAME19, fid);
|
|
#else /*H5_HAVE_FILTER_SZIP*/
|
|
SKIPPED();
|
|
HDputs(not_supported);
|
|
#endif /*H5_HAVE_FILTER_SZIP*/
|
|
|
|
TESTING("dataset of LE FLOAT with Shuffle filter");
|
|
nerrors += check_data_f(DATASETNAME20, fid);
|
|
|
|
TESTING("dataset of BE FLOAT with Shuffle filter");
|
|
nerrors += check_data_f(DATASETNAME21, fid);
|
|
|
|
TESTING("dataset of LE FLOAT with Nbit filter");
|
|
nerrors += check_data_f(DATASETNAME22, fid);
|
|
|
|
TESTING("dataset of BE FLOAT with Nbit filter");
|
|
nerrors += check_data_f(DATASETNAME23, fid);
|
|
|
|
if (H5Fclose(fid))
|
|
FAIL_STACK_ERROR
|
|
return nerrors;
|
|
|
|
error:
|
|
H5E_BEGIN_TRY
|
|
{
|
|
H5Fclose(fid);
|
|
}
|
|
H5E_END_TRY;
|
|
return nerrors;
|
|
} /* end check_file() */
|
|
|
|
/*-------------------------------------------------------------------------
|
|
* Function: main
|
|
*
|
|
* Purpose: Tests reading files created on LE and BE systems.
|
|
*
|
|
* Return: EXIT_SUCCESS/EXIT_FAILURE
|
|
*
|
|
* Programmer: Raymond Lu
|
|
* Thursday, March 23, 2006
|
|
*
|
|
*-------------------------------------------------------------------------
|
|
*/
|
|
int
|
|
main(void)
|
|
{
|
|
char filename[1024];
|
|
int nerrors = 0;
|
|
|
|
h5_reset();
|
|
|
|
HDputs("\n");
|
|
HDputs("Testing reading data created on Linux");
|
|
h5_fixname(FILENAME[1], H5P_DEFAULT, filename, sizeof(filename));
|
|
nerrors += check_file(filename);
|
|
|
|
HDputs("\n");
|
|
HDputs("Testing reading data created on Solaris");
|
|
h5_fixname(FILENAME[2], H5P_DEFAULT, filename, sizeof(filename));
|
|
nerrors += check_file(filename);
|
|
|
|
if (nerrors) {
|
|
HDprintf("***** %d FAILURE%s! *****\n", nerrors, 1 == nerrors ? "" : "S");
|
|
return EXIT_FAILURE;
|
|
} /* end if */
|
|
|
|
HDprintf("All data type tests passed.\n");
|
|
return EXIT_SUCCESS;
|
|
} /* end main() */
|