Files
hdf5/java/test/TestH5Tbasic.java
Allen Byrne c7ffe683e5 Primary change is HDFFV-11212 - new refs and JNI (#372)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction

* Update supported platforms

* Revert whitespace changes

* Correct whitespace

* Changes from PR#3

* HDFFV-11213 added option to control gcc10 warnings diagnostics

* HDFFV-11212 Use the new references correctly in JNI utility and tests

* format source

* Fix typo

* Add new test file

* HDFFV-11212 - update test and remove unused arg

* Minor non-space formatting changes

* Use H5I_INVALID_ID instead of "-1"

* source formatting

* add missing testfile, update jni function

* Undo commit of debug code

* remove mislocated file

* Fix h5repack test for handling of fapls and id close

* Update h5diff test files usage text

* HDFFV-11212 add new ref tests for JNI export dataset

* src format update

* Remove blank line typo

* src format typo

* long double requires %Lg

* Another long double foramt specifer S.B. %Lg

* issue with t128bit test

* Windows issue with h5dump and type.

* Fix review issues

* refactor function nesting and fix error checks

* format fixes

* Remove untested functions and javadoc quiet comments

* Restore TRY block.

* Change string append errors to memory exception

* revert to H5_JNI_FATAL_ERROR - support functions need work

* Add assertion error for h5util functions

* remove duplicate function

* format fix

* Revert HD function error handling

* Update copyright comments
2021-02-25 15:12:57 -06:00

160 lines
5.5 KiB
Java

/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the COPYING file, which can be found at the root of the source code *
* distribution tree, or in https://www.hdfgroup.org/licenses. *
* If you do not have access to either file, you may request a copy from *
* help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
package test;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
import hdf.hdf5lib.H5;
import hdf.hdf5lib.HDF5Constants;
import org.junit.After;
import org.junit.Before;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.TestName;
public class TestH5Tbasic {
@Rule public TestName testname = new TestName();
@Before
public void checkOpenIDs() {
assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
System.out.print(testname.getMethodName());
}
@After
public void nextTestName() {
System.out.println();
}
@Test
public void testH5Tcopy() {
long H5strdid = HDF5Constants.H5I_INVALID_HID;
try {
H5strdid = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
assertTrue("H5.H5Tcopy",H5strdid > 0);
}
catch (Throwable err) {
err.printStackTrace();
fail("testH5Tcopy: " + err);
}
finally {
if (H5strdid >= 0)
try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
}
}
@Test
public void testH5Tequal() {
long H5strdid = HDF5Constants.H5I_INVALID_HID;
try {
H5strdid = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
assertTrue("H5.H5Tcopy",H5strdid > 0);
boolean teq = H5.H5Tequal(HDF5Constants.H5T_C_S1, H5strdid);
assertTrue("H5.H5Tequal",teq);
}
catch (Throwable err) {
err.printStackTrace();
fail("testH5Tequal: " + err);
}
finally {
if (H5strdid >= 0)
try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
}
}
@Test
public void testH5Tequal_not() {
long H5strdid = HDF5Constants.H5I_INVALID_HID;
try {
H5strdid = H5.H5Tcopy(HDF5Constants.H5T_STD_U64LE);
assertTrue("H5.H5Tcopy",H5strdid > 0);
boolean teq = H5.H5Tequal(HDF5Constants.H5T_IEEE_F32BE, H5strdid);
assertFalse("H5.H5Tequal",teq);
}
catch (Throwable err) {
err.printStackTrace();
fail("testH5Tequal_not: " + err);
}
finally {
if (H5strdid >= 0)
try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
}
}
@Test
public void testH5Tconvert() {
String[] strs = {"a1234","b1234"};
int srcLen = 5;
int dstLen = 10;
long srcId = HDF5Constants.H5I_INVALID_HID;
long dstId = HDF5Constants.H5I_INVALID_HID;
int dimSize = strs.length;
byte[] buf = new byte[dimSize*dstLen];
for (int i=0; i<dimSize; i++)
System.arraycopy(strs[i].getBytes(), 0, buf, i*srcLen, 5);
try {
srcId = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
H5.H5Tset_size(srcId, (long)srcLen);
dstId = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
H5.H5Tset_size(dstId, (long)dstLen);
H5.H5Tconvert(srcId, dstId, dimSize, buf, null, HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
fail("testH5Tconvert: " + err);
}
finally {
try {H5.H5Tclose(srcId);} catch (Exception ex) {}
try {H5.H5Tclose(dstId);} catch (Exception ex) {}
}
for (int i=0; i<strs.length; i++) {
assertTrue((new String(buf, i*dstLen, dstLen)).startsWith(strs[i]));
}
}
@Test
public void testH5Torder_size() {
long H5strdid = HDF5Constants.H5I_INVALID_HID;
try {
// Fixed length string
H5strdid = H5.H5Tcopy(HDF5Constants.H5T_C_S1);
assertTrue("H5.H5Tcopy",H5strdid > 0);
H5.H5Tset_size(H5strdid, (long)5);
assertTrue(HDF5Constants.H5T_ORDER_NONE == H5.H5Tget_order(H5strdid));
H5.H5Tset_order(H5strdid, HDF5Constants.H5T_ORDER_NONE);
assertTrue(HDF5Constants.H5T_ORDER_NONE == H5.H5Tget_order(H5strdid));
assertTrue(5 == H5.H5Tget_size(H5strdid));
// Variable length string
H5.H5Tset_size(H5strdid, HDF5Constants.H5T_VARIABLE);
H5.H5Tset_order(H5strdid, HDF5Constants.H5T_ORDER_BE);
assertTrue(HDF5Constants.H5T_ORDER_BE == H5.H5Tget_order(H5strdid));
}
catch (Throwable err) {
err.printStackTrace();
fail("testH5Torder: " + err);
}
finally {
if (H5strdid >= 0)
try {H5.H5Tclose(H5strdid);} catch (Exception ex) {}
}
}
}