hdf5/java/examples/groups/H5Ex_G_Compact.java

/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
 * Copyright by The HDF Group.                                               *
 * Copyright by the Board of Trustees of the University of Illinois.         *
 * All rights reserved.                                                      *
 *                                                                           *
 * This file is part of HDF5.  The full HDF5 copyright notice, including     *
 * terms governing use, modification, and redistribution, is contained in    *
 * the COPYING file, which can be found at the root of the source code       *
 * distribution tree, or in https://www.hdfgroup.org/licenses.               *
 * If you do not have access to either file, you may request a copy from     *
 * help@hdfgroup.org.                                                        *
 * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */

/************************************************************
    Creating a file and print the storage layout.
 ************************************************************/

package examples.groups;

import hdf.hdf5lib.H5;
import hdf.hdf5lib.HDF5Constants;
import hdf.hdf5lib.structs.H5G_info_t;

import java.util.EnumSet;
import java.util.HashMap;
import java.util.Map;

public class H5Ex_G_Compact {

    private static final String FILE1 = "H5Ex_G_Compact1.h5";
    private static final String FILE2 = "H5Ex_G_Compact2.h5";
    private static final String GROUP = "G1";

    enum H5G_storage {
        H5G_STORAGE_TYPE_UNKNOWN(-1),
        H5G_STORAGE_TYPE_SYMBOL_TABLE(0),
        H5G_STORAGE_TYPE_COMPACT(1),
        H5G_STORAGE_TYPE_DENSE(2);

        private static final Map<Integer, H5G_storage> lookup = new HashMap<Integer, H5G_storage>();

        static {
            for (H5G_storage s : EnumSet.allOf(H5G_storage.class))
                lookup.put(s.getCode(), s);
        }

        private int code;

        H5G_storage(int layout_type) {
            this.code = layout_type;
        }

        public int getCode() {
            return this.code;
        }

        public static H5G_storage get(int code) {
            return lookup.get(code);
        }
    }

    public static void CreateGroup() {
        long file_id = HDF5Constants.H5I_INVALID_HID;
        long group_id = HDF5Constants.H5I_INVALID_HID;
        long fapl_id = HDF5Constants.H5I_INVALID_HID;
        H5G_info_t ginfo;
        long size;

        // Create file 1. This file will use original format groups.
        try {
            file_id = H5.H5Fcreate (FILE1, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
        }
        catch (Exception e) {
            e.printStackTrace();
        }
        // Create a group in the file1.
        try {
            if(file_id >= 0)
                group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Obtain the group info and print the group storage type.
        try {
            if(group_id >= 0) {
                ginfo = H5.H5Gget_info(group_id);
                System.out.print("Group storage type for " + FILE1 + " is: ");
                switch (H5G_storage.get(ginfo.storage_type)) {
                case H5G_STORAGE_TYPE_COMPACT:
                    System.out.println("H5G_STORAGE_TYPE_COMPACT"); // New compact format
                    break;
                case H5G_STORAGE_TYPE_DENSE:
                    System.out.println("H5G_STORAGE_TYPE_DENSE"); // New dense (indexed) format
                    break;
                case H5G_STORAGE_TYPE_SYMBOL_TABLE:
                    System.out.println("H5G_STORAGE_TYPE_SYMBOL_TABLE"); // Original format
                    break;
                case H5G_STORAGE_TYPE_UNKNOWN:
                    System.out.println("H5G_STORAGE_TYPE_UNKNOWN");
                    break;
                default:
                    System.out.println("Storage Type Invalid");
                    break;
                }
            }
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Close the group.
        try {
            if (group_id >= 0)
                H5.H5Gclose(group_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // close the file 1.
        try {
            if (file_id >= 0)
                H5.H5Fclose(file_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Re-open file 1. Need to get the correct file size.
        try {
            file_id = H5.H5Fopen(FILE1, HDF5Constants.H5F_ACC_RDONLY, HDF5Constants.H5P_DEFAULT);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Obtain and print the file size.
        try {
            if (file_id >= 0) {
                size = H5.H5Fget_filesize(file_id);
                System.out.println("File size for " + FILE1 + " is: " + size + " bytes");
            }
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Close FILE1.
        try {
            if (file_id >= 0)
                H5.H5Fclose(file_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Set file access property list to allow the latest file format.
        // This will allow the library to create new compact format groups.
        try {
            fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
            if (fapl_id >= 0)
                H5.H5Pset_libver_bounds(fapl_id, HDF5Constants.H5F_LIBVER_LATEST, HDF5Constants.H5F_LIBVER_LATEST);
        }
        catch (Exception e) {
            e.printStackTrace();
        }
        System.out.println();
        // Create file 2 using the new file access property list.
        try {
            file_id = H5.H5Fcreate(FILE2, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT, fapl_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }
        // Create group in file2.
        try {
            if(file_id >= 0)
                group_id = H5.H5Gcreate(file_id, GROUP, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Obtain the group info and print the group storage type.
        try {
            if (group_id >= 0) {
                ginfo = H5.H5Gget_info(group_id);
                System.out.print("Group storage type for " + FILE2 + " is: ");
                switch (H5G_storage.get(ginfo.storage_type)) {
                case H5G_STORAGE_TYPE_COMPACT:
                    System.out.println("H5G_STORAGE_TYPE_COMPACT"); // New compact format
                    break;
                case H5G_STORAGE_TYPE_DENSE:
                    System.out.println("H5G_STORAGE_TYPE_DENSE"); // New dense (indexed) format
                    break;
                case H5G_STORAGE_TYPE_SYMBOL_TABLE:
                    System.out.println("H5G_STORAGE_TYPE_SYMBOL_TABLE"); // Original format
                    break;
                case H5G_STORAGE_TYPE_UNKNOWN:
                    System.out.println("H5G_STORAGE_TYPE_UNKNOWN");
                    break;
                default:
                    System.out.println("Storage Type Invalid");
                    break;
                }
            }
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Close the group.
        try {
            if (group_id >= 0)
                H5.H5Gclose(group_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // close the file 2.
        try {
            if (file_id >= 0)
                H5.H5Fclose(file_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Re-open file 2. Needed to get the correct file size.
        try {
            file_id = H5.H5Fopen(FILE2, HDF5Constants.H5F_ACC_RDONLY, fapl_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Obtain and print the file size.
        try {
            if (file_id >= 0) {
                size = H5.H5Fget_filesize(file_id);
                System.out.println("File size for " + FILE2 + " is: " + size + " bytes");
            }
        }
        catch (Exception e) {
            e.printStackTrace();
        }

        // Close FILE2.
        try {
            if (file_id >= 0)
                H5.H5Fclose(file_id);
        }
        catch (Exception e) {
            e.printStackTrace();
        }
    }

    public static void main(String[] args) {
        H5Ex_G_Compact.CreateGroup();
    }
}