Intro
======
H5.intro.html
Major rewrite to Groups section. New Example 7 (groups).
Added TOC and requisite links.
Numbered sections.
Labelled figures and centered those that were not.
Fixed table formatting.
===========
User Guide
===========
H5.user.html
Linked in Chunking.html.
Linked in References.html.
Linked in DDL.html.
Chunking.html
Minor edits.
DDL.html
References.html
New documents.
Datatypes.html
Added "R Reference" to base name description and
"H5T_STD_ROBJ -- Reference to an entire object
in a file" to list of datatype names.
Files.html
H5Fflush
Added scope parameter.
Groups.html
Removed references to "current working group."
Removed H5Gpush, H5Gpop, and H5Gset functions.
Removed note that H5Glink and H5Gunlink were not implemented.
=================
Reference Manual
=================
RM_*.html and Tools.html
Updated Reference Manual internal cross-linking (the link
banner at the top and bottom of each page).
Changed
Returns SUCCEED (0) if successful;
otherwise FAIL (-1).
to read
Returns a non-negative value if successful;
otherwise returns a negative value.
and several derived changes where circumstances differred
only slightly.
Minor copy edits throughout.
RM_H5.html
Corrected H5open "Purpose" statement.
RM_H5A.html
Changed H5Aget_name return type to hssize_t.
RM_H5F.html
H5Fflush
Added scope parameter.
Added H5Freopen.
RM_H5Front.html
Reordered listing of interfaces to alphabetical order (H5,
H5A, H5D, ...)
Added H5I, H5R, and H5RA.
RM_H5G.html
H5Gopen
Edited "Description."
H5Gget_objinfo
Added named datatype to list of valid values for loc_id.
RM_H5I.html Identifier Interface
New section.
RM_H5P.html
Added H5Pset_fill_value and H5Pget_fill_value.
Several minor copy edits.
RM_H5R.html Reference Interface
New section.
H5RA.html
Essentially a new section. It was in the tree previously,
but it did not actually have content.
RM_H5S.html
Changed H5Sget_select_npoints return type to hssize_t.
Tools.html
Updated h5dump documentation.
385 lines
14 KiB
HTML
385 lines
14 KiB
HTML
<html>
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<head><title>
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HDF5/H5F Draft API Specification
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</title></head>
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<body>
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<hr>
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<center>
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<a href="RM_H5Front.html">HDF5 Reference Manual</a>
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<a href="RM_H5.html">H5</a>
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<a href="RM_H5A.html">H5A</a>
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<a href="RM_H5D.html">H5D</a>
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<a href="RM_H5E.html">H5E</a>
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H5F
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<a href="RM_H5G.html">H5G</a>
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<a href="RM_H5I.html">H5I</a>
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<a href="RM_H5P.html">H5P</a>
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<a href="RM_H5R.html">H5R</a>
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<a href="RM_H5RA.html">H5RA</a>
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<a href="RM_H5S.html">H5S</a>
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<a href="RM_H5T.html">H5T</a>
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<a href="RM_H5Z.html">H5Z</a>
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<a href="Tools.html">Tools</a>
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<!--
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<a href="Glossary.html">Glossary</a>
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-->
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</center>
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<hr>
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<center>
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<h1>H5F: File Interface</h1>
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</center>
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<h2>File API Functions</h2>
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These functions are designed to provide file-level access to HDF5 files.
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Further manipulation of objects inside a file is performed through one of APIs
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documented below.
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<table border=0>
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<tr><td valign=top>
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<ul>
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<li><a href="#File-Open">H5Fopen</a>
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<li><a href="#File-Create">H5Fcreate</a>
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<li><a href="#File-IsHDF5">H5Fis_hdf5</a>
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</ul>
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</td><td> </td><td valign=top>
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<ul>
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<li><a href="#File-Flush">H5Fflush</a>
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<li><a href="#File-Close">H5Fclose</a>
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<li><a href="#File-Reopen">H5Freopen</a>
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</ul>
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</td><td> </td><td valign=top>
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<ul>
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<li><a href="#File-GetCreatePlist">H5Fget_create_plist</a>
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<li><a href="#File-GetAccessPlist">H5Fget_access_plist</a>
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</ul>
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</td></tr>
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</table>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-Open">H5Fopen</a>
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<dt><strong>Signature:</strong>
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<dd><em>hid_t </em><code>H5Fopen</code>(<em>const char *</em><code>name</code>,
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<em>unsigned</em> <code>flags</code>,
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<em>hid_t</em> <code>access_id</code>
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)
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<dt><strong>Purpose:</strong>
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<dd>Opens an existing file.
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<dt><strong>Description:</strong>
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<dd><code>H5Fopen</code> opens an existing file and is the primary
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function for accessing existing HDF5 files.
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<p>
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The parameter <code>access_id</code> is a file access property
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list identifier or <code>H5P_DEFAULT</code> for the default I/O access
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parameters.
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<p>
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The <code>flags</code> argument determines whether writing
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to an existing file will be allowed or not.
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The file is opened with read and write permission if
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<code>flags</code> is set to <code>H5F_ACC_RDWR</code>.
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All flags may be combined with the bit-wise OR operator (`|')
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to change the behavior of the file open call.
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The more complex behaviors of a file's access are controlled
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through the file-access property list.
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<p>
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Files which are opened more than once return a unique identifier
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for each <code>H5Fopen()</code> call and can be accessed
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through all file identifiers.
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<p>
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The return value is a file identifier for the open file and it
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should be closed by calling <code>H5Fclose()</code> when it is
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no longer needed.
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>const char *</em><code>name</code>
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<dd>Name of the file to access.
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<dt><em>unsigned</em> <code>flags</code>
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<dd>File access flags. See the <code>H5Fcreate</code>
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parameters list for a list of possible values.
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<dt><em>hid_t</em> <code>access_id</code>
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<dd>Identifier for the file access properties list.
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns a file identifier if successful;
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otherwise returns a negative value.
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</dl>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-Create">H5Fcreate</a>
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<dt><strong>Signature:</strong>
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<dd><em>hid_t </em><code>H5Fcreate</code>(<em>const char *</em><code>name</code>,
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<em>unsigned</em> <code>flags</code>,
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<em>hid_t</em> <code>create_id</code>,
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<em>hid_t</em> <code>access_id</code>
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)
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<dt><strong>Purpose:</strong>
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<dd>Creates HDF5 files.
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<dt><strong>Description:</strong>
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<dd><code>H5Fcreate</code> is the primary function for creating
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HDF5 files .
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<p>
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The <code>flags</code> parameter determines whether an
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existing file will be overwritten. All newly created files
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are opened for both reading and writing. All flags may be
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combined with the bit-wise OR operator (`|') to change
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the behavior of the <code>H5Fcreate</code> call.
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<p>
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The more complex behaviors of file creation and access
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are controlled through the file-creation and file-access
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property lists. The value of <code>H5P_DEFAULT</code> for
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a property list value indicates that the library should use
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the default values for the appropriate property list. Also see
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<code>H5Fpublic.h</code> for the list of supported flags.
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>const char *</em><code>name</code>
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<dd>Name of the file to access.
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<dt><em>uintn</em> <code>flags</code>
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<dd>File access flags. Possible values include:
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<ul><dl>
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<dt>H5F_ACC_RDWR
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<dd>Allow read and write access to file.
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<dt>H5F_ACC_RDONLY
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<dd>Allow read-only access to file.
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<dt>H5F_ACC_TRUNC
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<dd>Truncate file, if it already exists,
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erasing all data previously stored in the file.
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<dt>H5F_ACC_EXCL
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<dd>Fail if file already exists.
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<dt>H5F_ACC_DEBUG
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<dd>Print debug information.
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<dt>H5P_DEFAULT
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<dd>Apply default file access and creation properties.
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</dl></ul>
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<dt><em>hid_t</em> <code>create_id</code>
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<dd>File creation property list identifier, used when modifying
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default file meta-data.
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<dt><em>hid_t</em> <code>access_id</code>
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<dd>File access property list identifier.
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If parallel file access is desired, this is a collective
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call according to the communicator stored in the
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<code>access_id</code>.
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Use <code>0</code> for default access properties.
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns a file identifier if successful;
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otherwise returns a negative value.
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</dl>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-Flush">H5Fflush</a>
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<dt><strong>Signature:</strong>
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<dd><em>herr_t </em><code>H5Fflush</code>(<em>hid_t </em><code>object_id</code>,
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<em>H5F_scope_t</em> <code>scope</code>
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)
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<dt><strong>Purpose:</strong>
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<dd>Flushes all buffers associated with a file to disk.
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<dt><strong>Description:</strong>
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<dd><code>H5Fflush</code> causes all buffers associated with a
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file to be immediately flushed to disk without removing the
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data from the cache.
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<p>
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<code>object_id</code> can be any object associated with the file,
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including the file itself, a dataset, a group, an attribute, or
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a named data type.
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<p>
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<code>scope</code> specifies whether the scope of the flushing
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action is global or local. Valid values are
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<center>
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<table border=0>
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<tr><td align=left valign=bottom><code>H5F_SCOPE_GLOBAL</code></td>
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<td> </td>
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<td align=left valign=bottom>Flushes the entire virtual file.</td></tr>
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<tr><td align=left valign=bottom><code>H5F_SCOPE_LOCAL</code></td>
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<td></td>
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<td align=left valign=bottom>Flushes only the specified file.</td></tr>
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</table>
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</center>
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>const char *</em><code>object_id</code>
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<dd>Identifier of object used to identify the file.
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<dt><em>H5F_scope_t</em> <code>scope</code>
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<dd>Specifies the scope of the flushing action.
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns a non-negative value if successful;
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otherwise returns a negative value.
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</dl>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-IsHDF5">H5Fis_hdf5</a>
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<dt><strong>Signature:</strong>
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<dd><em>hbool_t </em><code>H5Fis_hdf5</code>(<em>const char *</em><code>name</code>
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)
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<dt><strong>Purpose:</strong>
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<dd>Determines whether a file is in the HDF5 format.
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<dt><strong>Description:</strong>
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<dd><code>H5Fis_hdf5</code> determines whether a file is in
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the HDF5 format.
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>const char *</em><code>name</code>
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<dd>File name to check format.
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns <code>TRUE</code> or <code>FALSE</code> if successful.
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Otherwise returns a negative value.
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</dl>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-GetCreatePlist">H5Fget_create_plist</a>
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<dt><strong>Signature:</strong>
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<dd><em>hid_t </em><code>H5Fget_create_plist</code>(<em>hid_t</em> <code>file_id</code>
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)
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<dt><strong>Purpose:</strong>
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<dd>Returns a file creation property list identifier.
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<dt><strong>Description:</strong>
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<dd><code>H5Fget_create_plist</code> returns a file creation
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property list identifier identifying the creation properties
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used to create this file. This function is useful for
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duplicating properties when creating another file.
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<p>
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See "File Creation Properties" in
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<a href="RM_H5P.html">H5P: Property List Interface</a>
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in this reference manual and
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"File Creation Properties"
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in <a href="Files.html"><cite>Files</cite></a> in the
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<cite>HDF5 User's Guide</cite> for
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additional information and related functions.
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>hid_t</em> <code>file_id</code>
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<dd>Identifier of the file to get creation property list of
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns a file creation property list identifier if successful;
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otherwise returns a negative value.
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</dl>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-GetAccessPlist">H5Fget_access_plist</a>
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<dt><strong>Signature:</strong>
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<dd><em>hid_t </em><code>H5Fget_access_plist</code>(<em>hid_t</em> <code>file_id</code>)
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<dt><strong>Purpose:</strong>
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<dd>Returns a file access property list identifier.
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<dt><strong>Description:</strong>
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<dd><code>H5Fget_access_plist</code> returns the
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file access property list identifier of the specified file.
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<p>
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See "File Access Properties" in
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<a href="RM_H5P.html">H5P: Property List Interface</a>
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in this reference manual and
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"File Access Property Lists"
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in <a href="Files.html"><cite>Files</cite></a> in the
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<cite>HDF5 User's Guide</cite> for
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additional information and related functions.
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>hid_t</em> <code>file_id</code>
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<dd>Identifier of file to get access property list of
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns a file access property list identifier if successful;
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otherwise returns a negative value.
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</dl>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-Close">H5Fclose</a>
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<dt><strong>Signature:</strong>
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<dd><em>herr_t </em><code>H5Fclose</code>(<em>hid_t</em> <code>file_id</code>
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)
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<dt><strong>Purpose:</strong>
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<dd>Terminates access to an HDF5 file.
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<dt><strong>Description:</strong>
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<dd><code>H5Fclose</code> terminates access to an HDF5 file.
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If this is the last file identifier open for a file
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and if access identifiers are still in use,
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this function will fail.
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>hid_t</em> <code>file_id</code>
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<dd>Identifier of a file to terminate access to.
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns a non-negative value if successful;
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otherwise returns a negative value.
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</dl>
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<hr>
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<dl>
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<dt><strong>Name:</strong> <a name="File-Reopen">H5Freopen</a>
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<dt><strong>Signature:</strong>
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<dd><em>hid__t </em><code>H5Freopen</code>(<em>hid_t</em> <code>file_id</code>
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)
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<dt><strong>Purpose:</strong>
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<dd>Reopens an HDF5 file.
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<dt><strong>Description:</strong>
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<dd><code>H5Freopen</code> reopens an HDF5 file. The new
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file identifier which is returned points to the same file
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as the specified file idetifier, <code>file_id</code>.
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Both identifiers share caches and other information.
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The only difference between the identifiers is that the
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new identifier is not mounted anywhere and no files are
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mounted on it.
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<dt><strong>Parameters:</strong>
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<dl>
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<dt><em>hid_t</em> <code>file_id</code>
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<dd>Identifier of a file to terminate access to.
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</dl>
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<dt><strong>Returns:</strong>
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<dd>Returns a new file identifier if successful;
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otherwise returns a negative value.
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</dl>
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<hr>
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<center>
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<a href="RM_H5Front.html">HDF5 Reference Manual</a>
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<a href="RM_H5.html">H5</a>
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<a href="RM_H5A.html">H5A</a>
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<a href="RM_H5D.html">H5D</a>
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<a href="RM_H5E.html">H5E</a>
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H5F
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<a href="RM_H5G.html">H5G</a>
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<a href="RM_H5I.html">H5I</a>
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<a href="RM_H5P.html">H5P</a>
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<a href="RM_H5R.html">H5R</a>
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<a href="RM_H5RA.html">H5RA</a>
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<a href="RM_H5S.html">H5S</a>
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<a href="RM_H5T.html">H5T</a>
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<a href="RM_H5Z.html">H5Z</a>
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<a href="Tools.html">Tools</a>
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<!--
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<a href="Glossary.html">Glossary</a>
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-->
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</center>
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<hr>
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<address>
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<a href="mailto:hdfhelp@ncsa.uiuc.edu">HDF Help Desk</a>
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<br>
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Last modified: 27 October 1998
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</body>
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</html>
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