Files
hdf5/test/testvfdswmr.sh.in
Dana Robinson 62868dabe1 Parallel updates and fixes for VFD SWMR (#705)
* Brings CMake updates from develop

* Brings reduction in pedantic casts from develop

* Purges UFAIL from the library (#637)

* Committing clang-format changes

* Purges UFAIL from the library

* H5HL_insert change requested in PR

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Removes gratuitous (double)x.yF casts (#632)

* Committing clang-format changes

* Removes gratuitous (double)x.yF casts

* Committing clang-format changes

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Committing clang-format changes

* Cleans up a const warning left over from previous constification (#633)

* Committing clang-format changes

* Adds consts to a few global variables

* Cleans up a const warning left over from previous constification

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Formatted source

* Bring over some VOL registration changes

* VOL cleanup

* H5VL_request_status_t substitutions

* H5F.c cleanup

* Minor API tweaks from develop

* Moves H5G package init/teardown to H5Gint.c

* H5G cleanup

* H5M cleanup

* H5SM cleanup

* H5T cleanup

* H5R cleanup

* H5Lpublic.h cleanup

* H5L cleanup

* H5O cleanup

* H5A, H5CS, and H5AC cleanup

* Moved H5A init/teardown code to H5Aint.c

* Moves H5D I/O functions to H5D.c

* H5D cleanup

* Misc minor cleanup

* H5P close cleanup

* H5Tpublic.h cleanup

* Fixes err_compat test

* H5PLpublic.h cleanup

* Updates H5Ppublic.h

* H5Fpublic.h updates

* H5A.c cleanup

* Brings over H5Aexists and related changes

* Brings CMake shell testing changes from develop

* Close callback changes

* H5R and H5Tcommit normalization

* err_compat test works now

* H5O tweaks

* Updates VOL registration code

* Brings over H5VL_create_object

* H5Tconv.c reformatting

* H5T.c tweaks

* Brings datatype and reference updates from develop

* Brings VOL plugin loading changes from develop

* Brings event sets from develop

* Brings async functions over

* Tools changes

* Brings over many tools changes from develop

* Brings VOL flags from develop

* Fixes h5dump double/float tests

* Updates h5repack tests

* Brings h5diff test changes from develop

* Last h5dump changes

* Brings test changes from develop

* Committing clang-format changes

* Tidied h5_testing()

* Brings chunk iteration code + misc from develop

* Updates vds test

* Enables external link parallel test

* Brings updated property lists from develop

* H5G changes from develop

* H5MF cleanup

* Brings vfd_swmr test back into CMake

* Updates threadsafe test

* Updates plist test

* Brings recent changes from develop

* Require a C++11 compiler to build the C++ wrappers (#693)

* Committing clang-format changes

* Requires a C++11 compiler to build the C++ wrappers

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Fix H5FD_mpio_Debug="rw" can report MPI_count instead of bytes (#699)

* Removes pre-C99 build and header cruft (#700)

* Assumes ANSI C headers exist
* Assumes stdbool.h, stdint.h, and inttypes.h are present
* Assumes the C++ compiler can handle stdint.h
* Removes all work-arounds for missing functionality, especially stdbool.h

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>

* Updates release documents

* Brings parallel changes from develop

* Adds a VFD/parallel check program for the VFD SWMR shell test

* Updates MANIFEST

* Disable building VFD SWMR acceptance tests on CMake

* Removes err.h from genall5.c

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-05-28 12:04:18 -07:00

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Bash

#!/usr/bin/env bash
#
# Copyright by The HDF Group.
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including
# terms governing use, modification, and redistribution, is contained in
# the COPYING file, which can be found at the root of the source code
# distribution tree, or in https://www.hdfgroup.org/releases.
# If you do not have access to either file, you may request a copy from
# help@hdfgroup.org.
#
# Tests for the vfd swmr feature.
#
###############################################################################
# VFD SWMR concurrent tests which are modified from existing swmr concurrent tests.
# This is copied and modified from testswmr.sh.in
#
###############################################################################
srcdir=@srcdir@
. ${srcdir}/supervise.subr
###############################################################################
## test parameters
###############################################################################
Nreaders=5 # number of readers to launch
Nrdrs_spa=3 # number of sparse readers to launch
Nrecords=400000 # number of records to write
Nrecs_rem=40000 # number of times to shrink
Nrecs_spa=20000 # number of records to write in the sparse test
Nsecs_add=5 # number of seconds per read interval
Nsecs_rem=3 # number of seconds per read interval
Nsecs_addrem=8 # number of seconds per read interval
nerrors=0
nsofterrors=0 # soft errors are expected to occur some of the time
# on a couple of nondeterministic tests.
###############################################################################
## test parameters for vfd_swmr_bigset_writer.c and vfd_swmr_group_writer.c
## based on HDF5TestExpress:
## 0: Exhaustive run: Tests take a long time to run.
## 1: Default run.
## 2+: Quick run
###############################################################################
if [[ -z $HDF5TestExpress ]]; then # Set to default when not set
HDF5TestExpress=1
fi
##
##Default setting
BIGSET_n=25 # -n option: # of iterations
BIGSET_few_s=20 # -s option: # of datasets (for few_big test)
BIGSET_many_s=500 # -s option: # of datasets (for many_small test)
GROUP_n=40 # -n option: # of groups (for group test)
GROUP_attr_n=1 # -n option: # of groups (for group attribute test)
GROUP_op_n=1 # -n option: # of groups (for group attribute test)
if [[ "$HDF5TestExpress" -eq 0 ]] ; then # Setting for exhaustive run
BIGSET_n=50
BIGSET_few_s=40
BIGSET_many_s=1000
GROUP_n=400
GROUP_attr_n=2
GROUP_op_n=2
elif [[ "$HDF5TestExpress" -gt 1 ]]; then # Setting for quick run
BIGSET_n=10
BIGSET_few_s=10
BIGSET_many_s=100
GROUP_n=20
fi
###############################################################################
## definitions for message file to coordinate test runs
###############################################################################
WRITER_MESSAGE=VFD_SWMR_WRITER_MESSAGE # The message file created by writer that the open is complete
# This should be the same as the define in "./swmr_common.h"
MESSAGE_TIMEOUT=300 # Message timeout length in secs
# This should be the same as the define in "./h5test.h"
###############################################################################
## For attrdset test: definitions for fifo files to coordinate test runs
###############################################################################
ATTRDSET_FIFO_WRITER_TO_READER=fifo_attrdset_writer_to_reader
ATTRDSET_FIFO_READER_TO_WRITER=fifo_attrdset_reader_to_writer
###############################################################################
## For dsetops test: definitions for fifo files to coordinate test runs
###############################################################################
DSETOPS_FIFO_WRITER_TO_READER=fifo_dsetops_writer_to_reader
DSETOPS_FIFO_READER_TO_WRITER=fifo_dsetops_reader_to_writer
###############################################################################
## short hands and function definitions
###############################################################################
DPRINT=: # Set to "echo Debug:" for debugging printing,
# else ":" for noop.
IFDEBUG=: # Set to null to turn on debugging, else ":" for noop.
# Print a line-line message left justified in a field of 70 characters
# beginning with the word "Testing".
#
TESTING() {
SPACES=" "
echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012'
}
# To wait for the writer message file or till the maximum # of seconds is reached
# $1 is the message file to wait for
# This performs similar function as the routine h5_wait_message() in test/h5test.c
WAIT_MESSAGE() {
message=$1 # Get the name of the message file to wait for
t0=`date +%s` # Get current time in seconds
difft=0 # Initialize the time difference
mexist=0 # Indicate whether the message file is found
while [ $difft -lt $MESSAGE_TIMEOUT ] ; # Loop till message times out
do
t1=`date +%s` # Get current time in seconds
difft=`expr $t1 - $t0` # Calculate the time difference
if [ -e $message ]; then # If message file is found:
mexist=1 # indicate the message file is found
rm $message # remove the message file
break # get out of the while loop
fi
done;
if test $mexist -eq 0; then
# Issue warning that the writer message file is not found, continue with launching the reader(s)
echo warning: $WRITER_MESSAGE is not found after waiting $MESSAGE_TIMEOUT seconds
else
echo $WRITER_MESSAGE is found
fi
}
###############################################################################
## Main
##
## Modifications:
## Vailin Choi; July 2013
## Add waiting of message file before launching the reader(s).
## Due to the implementation of file locking, coordination
## is needed in file opening for the writer/reader tests
## to proceed as expected.
##
###############################################################################
# The build (current) directory might be different than the source directory.
if test -z "$srcdir"; then
srcdir=.
fi
# Check to see if the VFD specified by the HDF5_DRIVER environment variable
# supports SWMR and/or if we are using parallel HDF5, which does not
# currently support SWMR.
./vfd_swmr_check_compat
rc=$?
if [ $rc -ne 0 ] ; then
echo
echo "Either the VFD specified by the HDF5_DRIVER environment variable"
echo "does not support VFD SWMR or parallel HDF5 was configured, which"
echo "currently does not support SWMR."
echo
echo "VFD SWMR acceptance tests skipped"
echo
exit 0
fi
all_tests="generator expand shrink expand_shrink sparse vlstr_null vlstr_oob zoo groups attrdset dsetops"
all_tests="${all_tests} groups_attrs os_groups_attrs groups_ops os_groups_ops few_big many_small"
tests=${all_tests}
if [ $# -gt 0 ]; then
tests=
fi
for t; do
if ! echo $all_tests | grep -q "\<${t}\>"; then
echo "$t: Unknown test, ${t}"
exit 1
fi
tests="${tests} ${t}"
done
echo tests=${tests}
for t in ${tests}; do
eval do_${t}=yes
done
# HDF5 has several tests that create and delete signal files to communicate
# between processes, and it seems that even though the names of the files are
# different, occasionally the wrong file is deleted, interrupting the flow of
# the test. Running each of these tests in its own directory should eliminate
# the problem.
rm -rf vfd_swmr_test
mkdir vfd_swmr_test
## With the --disable-shared option, swmr program files are built in the test
## directory, otherwise they are in test/.libs with a corresponding wrapper
## script in the test directory. The programs or wrapper scripts in test should
## always be copied, swmr files in .libs should be copied only if they exists.
#if [ -f .libs/vfd_swmr ]; then
# mkdir vfd_swmr_test/.libs
# for FILE in .libs/vfd_swmr*; do
# case "$FILE" in
# *.o) continue ;; ## don't copy the .o files
# esac
# cp $FILE vfd_swmr_test/.libs
# done
#fi
cd vfd_swmr_test
# Loop over index types
for index_type in "-i ea" "-i b2"
do
# Try without compression, only; uncomment "-c 5" to try with compression.
for compress in "" "-c 5"
do
echo
echo "** Loop testing parameters: $index_type $compress"
echo
if [ ${do_generator:-no} = yes ]; then
echo
echo "## Generator test"
# Launch the Generator without VFD SWMR write
echo launch the vfd_swmr_generator
../vfd_swmr_generator $compress $index_type
if test $? -ne 0; then
echo generator had error
nerrors=`expr $nerrors + 1`
fi
# Launch the Generator with VFD SWMR write
echo launch the vfd_swmr_generator with VFD SWMR write
../vfd_swmr_generator -s $compress $index_type
if test $? -ne 0; then
echo generator had error
nerrors=`expr $nerrors + 1`
fi
fi
if [ ${do_expand:-no} = yes ]; then
echo
echo "## Writer test - test expanding the dataset"
# Launch the Generator
echo launch the vfd_swmr_generator with VFD SWMR write
../vfd_swmr_generator -s $compress $index_type
if test $? -ne 0; then
echo generator had error
nerrors=`expr $nerrors + 1`
fi
# Remove any possible writer message file before launching writer
rm -f $WRITER_MESSAGE
#
# Launch the Writer
echo launch the vfd_swmr_writer
seed="" # Put -r <random seed> command here
catch_out_err_and_rc vfd_swmr_writer \
../vfd_swmr_writer -o $Nrecords $seed &
pid_writer=$!
$DPRINT pid_writer=$pid_writer
# Wait for message from writer process before starting reader(s)
WAIT_MESSAGE $WRITER_MESSAGE
#
# Launch the Readers
#declare -a seeds=(<seed1> <seed2> <seed3> ... )
echo launch $Nreaders vfd_swmr_readers
pid_readers=""
n=0
while [ $n -lt $Nreaders ]; do
#seed="-r ${seeds[$n]}"
seed=""
catch_out_err_and_rc vfd_swmr_reader.$n \
../vfd_swmr_reader $Nsecs_add $seed &
pid_readers="$pid_readers $!"
n=`expr $n + 1`
done
$DPRINT pid_readers=$pid_readers
$IFDEBUG ps
# Wait for the readers to finish before signalling the
# writer to quit: the writer holds the file open so that the
# readers will find the shadow file when they reopen
# the .h5 file.
wait $pid_readers
kill -USR1 $(cat vfd_swmr_writer.pid)
wait $pid_writer
# Collect exit codes of the readers
n=0
while [ $n -lt $Nreaders ]; do
if [ $(cat vfd_swmr_reader.$n.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
n=$((n + 1))
done
# Collect exit code of the writer
$DPRINT checked writer $pid_writer
if [ $(cat vfd_swmr_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_writer.{out,rc}
rm -f vfd_swmr_reader.*.{out,rc}
fi
if [ ${do_shrink:-no} = yes ]; then
if [ ${do_expand:-no} != yes ]; then
echo "Cancelling the 'shrink' test: it depends on the .h5 file left behind by the 'expand' test." 1>&2
exit 1
fi
echo
echo "## Remove test - test shrinking the dataset"
# Remove any possible writer message file before launching writer
rm -f $WRITER_MESSAGE
# Launch the Remove Writer
echo launch the vfd_swmr_remove_writer
seed="" # Put -r <random seed> command here
catch_out_err_and_rc vfd_swmr_writer \
../vfd_swmr_remove_writer -o $Nrecs_rem $seed &
pid_writer=$!
$DPRINT pid_writer=$pid_writer
# Wait for message from writer process before starting reader(s)
WAIT_MESSAGE $WRITER_MESSAGE
#
# Launch the Remove Readers
#declare -a seeds=(<seed1> <seed2> <seed3> ... )
n=0
pid_readers=""
echo launch $Nreaders swmr_remove_readers
while [ $n -lt $Nreaders ]; do
#seed="-r ${seeds[$n]}"
seed=""
catch_out_err_and_rc vfd_swmr_reader.$n \
../vfd_swmr_remove_reader $Nsecs_rem $seed &
pid_readers="$pid_readers $!"
n=`expr $n + 1`
done
$DPRINT pid_readers=$pid_readers
$IFDEBUG ps
# Wait for the readers to finish before signalling the
# writer to quit: the writer holds the file open so that the
# readers will find the shadow file when they reopen
# the .h5 file.
wait $pid_readers
kill -USR1 $(cat vfd_swmr_writer.pid)
wait $pid_writer
# Collect exit codes of the readers
n=0
while [ $n -lt $Nreaders ]; do
if [ $(cat vfd_swmr_reader.$n.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
n=$((n + 1))
done
# Collect exit code of the writer
$DPRINT checked writer $pid_writer
if [ $(cat vfd_swmr_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_writer.{out,rc}
rm -f vfd_swmr_reader.*.{out,rc}
fi
if [ ${do_expand_shrink:-no} = yes ]; then
echo
echo "## Expand/shrink test - randomly grow or shrink the dataset"
# Launch the Generator
echo launch the vfd_swmr_generator with VFD SWMR write
../vfd_swmr_generator -s $compress $index_type
if test $? -ne 0; then
echo generator had error
nerrors=`expr $nerrors + 1`
fi
# Launch the Writer (not in parallel - just to rebuild the datasets)
echo launch the vfd_swmr_writer
seed="" # Put -r <random seed> command here
../vfd_swmr_writer -W $Nrecords $seed
if test $? -ne 0; then
echo writer had error
nerrors=`expr $nerrors + 1`
fi
# Remove any possible writer message file before launching writer
rm -f $WRITER_MESSAGE
#
# Launch the Add/Remove Writer
echo launch the vfd_swmr_addrem_writer
seed="" # Put -r <random seed> command here
catch_out_err_and_rc vfd_swmr_writer \
../vfd_swmr_addrem_writer $Nrecords $seed &
pid_writer=$!
$DPRINT pid_writer=$pid_writer
# Wait for message from writer process before starting reader(s)
WAIT_MESSAGE $WRITER_MESSAGE
#
# Launch the Add/Remove Readers
#declare -a seeds=(<seed1> <seed2> <seed3> ... )
n=0
pid_readers=""
echo launch $Nreaders vfd_swmr_remove_readers
while [ $n -lt $Nreaders ]; do
#seed="-r ${seeds[$n]}"
seed=""
catch_out_err_and_rc vfd_swmr_reader.$n \
../vfd_swmr_remove_reader $Nsecs_addrem $seed &
pid_readers="$pid_readers $!"
n=`expr $n + 1`
done
$DPRINT pid_readers=$pid_readers
$IFDEBUG ps
# Wait for the readers to finish before signalling the
# writer to quit: the writer holds the file open so that the
# readers will find the shadow file when they reopen
# the .h5 file.
wait $pid_readers
kill -USR1 $(cat vfd_swmr_writer.pid)
wait $pid_writer
# Collect exit codes of the readers
n=0
while [ $n -lt $Nreaders ]; do
if [ $(cat vfd_swmr_reader.$n.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
n=$((n + 1))
done
# Collect exit code of the writer
$DPRINT checked writer $pid_writer
if [ ! -e vfd_swmr_writer.rc ] ||
[ $(cat vfd_swmr_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_writer.{out,rc}
rm -f vfd_swmr_reader.*.{out,rc}
fi
if [ ${do_sparse:-no} = yes ]; then
echo
echo "## Sparse writer test - write random dataset locations"
# Launch the Generator
# NOTE: Random seed is shared between readers and writers and is
# created by the generator.
echo launch the vfd_swmr_generator with VFD SWMR write
seed="" # Put -r <random seed> command here
../vfd_swmr_generator -s $compress $index_type $seed
if test $? -ne 0; then
echo generator had error
nerrors=`expr $nerrors + 1`
fi
# Remove any possible writer message file before launching writer
rm -f $WRITER_MESSAGE
# Launch the Sparse writer
echo launch the vfd_swmr_sparse_writer
catch_out_err_and_rc vfd_swmr_writer nice -n 20 \
../vfd_swmr_sparse_writer $Nrecs_spa &
pid_writer=$!
$DPRINT pid_writer=$pid_writer
# Wait for message from writer process before starting reader(s)
WAIT_MESSAGE $WRITER_MESSAGE
#
# Launch the Sparse readers
n=0
pid_readers=""
echo launch $Nrdrs_spa vfd_swmr_sparse_readers
while [ $n -lt $Nrdrs_spa ]; do
# The sparse reader spits out a LOT of data so it's set to 'quiet'
catch_out_err_and_rc vfd_swmr_reader.$n \
../vfd_swmr_sparse_reader -q $Nrecs_spa &
pid_readers="$pid_readers $!"
n=`expr $n + 1`
done
$DPRINT pid_readers=$pid_readers
$IFDEBUG ps
# Wait for the readers and the writer to finish.
echo "pid_readers=$pid_readers"
echo "pid_writer=$pid_writer"
# Wait for the readers to finish before signalling the
# writer to quit: the writer holds the file open so that the
# readers will find the shadow file when they reopen
# the .h5 file.
wait $pid_readers
kill -USR1 $(cat vfd_swmr_writer.pid)
wait $pid_writer
# Collect exit codes of the readers
n=0
while [ $n -lt $Nrdrs_spa ]; do
if [ $(cat vfd_swmr_reader.$n.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
n=$((n + 1))
done
# Collect exit code of the writer
$DPRINT checked writer $pid_writer
if [ $(cat vfd_swmr_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_writer.{out,rc}
rm -f vfd_swmr_reader.*.{out,rc}
fi
done
done
#
# Test variable-length strings, expecting errors.
#
for ty in null oob; do
if [ ${ty} = null ]; then
[ ${do_vlstr_null:-no} = no ] && continue
echo
echo "## VL string 1 - expect to read NULL"
else
[ ${do_vlstr_oob:-no} = no ] && continue
echo
echo "## VL string 2 - expect out-of-bounds access"
fi
echo launch vfd_swmr_vlstr_writer
catch_out_err_and_rc vfd_swmr_vlstr_writer \
../vfd_swmr_vlstr_writer -n 500 -q -t ${ty} &
pid_writer=$!
# pause?
catch_out_err_and_rc vfd_swmr_vlstr_reader \
../vfd_swmr_vlstr_reader -n 500 -q -t ${ty} &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
kill -USR1 $(cat vfd_swmr_vlstr_writer.pid)
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_vlstr_reader.rc) -ne 0 ]; then
echo reader had error
nsofterrors=$((nsofterrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_vlstr_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_vlstr_writer.{out,rc}
rm -f vfd_swmr_vlstr_reader.*.{out,rc}
done
#
# Make sure that a "zoo"---the variety of HDF5 object types---can be
# read and written by VFD SWMR.
#
if [ ${do_zoo:-no} = yes ]; then
rm -f ./shared_tick_num
echo launch vfd_swmr_zoo_writer
catch_out_err_and_rc vfd_swmr_zoo_writer \
../vfd_swmr_zoo_writer -q &
pid_writer=$!
# -l is the expected maximal number of ticks from the writer's finishing zoo creation or deletion
# to the reader's finishing validation of zoo creation or deletion
catch_out_err_and_rc vfd_swmr_zoo_reader \
../vfd_swmr_zoo_reader -l 4 -q &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_zoo_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_zoo_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_zoo_writer.{out,rc}
rm -f vfd_swmr_zoo_reader.*.{out,rc}
fi
# attrdset test
for options in "-p -g -a 10 -v -m -d 10 -c 3 -u 5" "-k -a 20 -v -m -d 5"; do
#
# Test a few big datasets of one and two dimensions.
#
if [ ${do_attrdset:-no} = no ]; then
continue
fi
# Clean up any existing fifo files from previous runs
if [ -e ./$ATTRDSET_FIFO_WRITER_TO_READER ]; then # If writer fifo file is found
rm -f ./$ATTRDSET_FIFO_WRITER_TO_READER
fi
if [ -e ./$ATTRDSET_FIFO_READER_TO_WRITER ]; then # If reader fifo file is found
rm -f ./$ATTRDSET_FIFO_READER_TO_WRITER
fi
echo launch vfd_swmr_attrdset_writer attrdset, options $options
catch_out_err_and_rc vfd_swmr_attrdset_writer \
../vfd_swmr_attrdset_writer $options &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_attrdset_reader \
../vfd_swmr_attrdset_reader $options &
pid_reader=$!
# Wait for the reader to finish before signaling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_attrdset_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_attrdset_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_attrdset_writer.{out,rc}
rm -f vfd_swmr_attrdset_reader.*.{out,rc}
done
# dsetops test
for options in "-p -e 20 -t" "-g -m 5 -n 2 -s 10 -w 7" "-k -m 10 -n 5 -r 5 -l 10"; do
#
#
if [ ${do_dsetops:-no} = no ]; then
continue
fi
# Clean up any existing fifo files from previous runs
if [ -e ./$DSETOPS_FIFO_WRITER_TO_READER ]; then # If writer fifo file is found
rm -f ./$DSETOPS_FIFO_WRITER_TO_READER
fi
if [ -e ./$DSETOPS_FIFO_READER_TO_WRITER ]; then # If reader fifo file is found
rm -f ./$DSETOPS_FIFO_READER_TO_WRITER
fi
#
echo launch vfd_swmr_dsetops_writer dsetops, options $options
catch_out_err_and_rc vfd_swmr_dsetops_writer \
../vfd_swmr_dsetops_writer $options &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_dsetops_reader \
../vfd_swmr_dsetops_reader $options &
pid_reader=$!
# Wait for the reader to finish before signaling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_dsetops_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_dsetops_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_dsetops_writer.{out,rc}
rm -f vfd_swmr_dsetops_reader.*.{out,rc}
done
#
# Make sure that we can create GROUP_n groups (20, 40, or 400 depending on the HDF5TestExpress level)
# while a reader waits for each to appear.
#
if [ ${do_groups:-no} = yes ]; then
echo launch vfd_swmr_group_writer
catch_out_err_and_rc vfd_swmr_group_writer \
../vfd_swmr_group_writer -q -c 10 -n $GROUP_n &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_group_reader \
../vfd_swmr_group_reader -q -c 10 -n $GROUP_n -u 5 &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_group_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_group_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_group_writer.{out,rc}
rm -f vfd_swmr_group_reader.*.{out,rc}
fi
# The group attribute test takes longer.
# So for standard run and quick run, we
# shorten the number of tests. The standard
# run covers all the features we need to
# test. The quick run doesn't cover the
# attribute storage change between dense and
# compact.
# The exhaustive run tries to test a feature
# per test from scratch.
#
grp_attr_list=(
"compact"
"dense"
"compact-del"
"dense-del"
"compact-add-to-dense"
"dense-del-to-compact"
"modify"
"add-vstr"
"remove-vstr"
"modify-vstr"
"add-ohr-block"
"del-ohr-block"
)
grp_sub_attr_list=(
"dense-del-to-compact"
"modify"
"remove-vstr"
"modify-vstr"
"del-ohr-block"
)
grp_short_sub_attr_list=(
"dense"
"modify"
"remove-vstr"
"modify-vstr"
"del-ohr-block"
)
if [[ "$HDF5TestExpress" -eq 1 ]] ; then #Setting for standard run
grp_attr_list=("${grp_sub_attr_list[@]}")
elif [[ "$HDF5TestExpress" -gt 1 ]] ; then #Setting for quick run
grp_attr_list=("${grp_short_sub_attr_list[@]}")
fi
for options in ${grp_attr_list[*]}; do
if [ ${do_groups_attrs:-no} = no ]; then
continue
fi
echo launch vfd_swmr_group attribute: $options
catch_out_err_and_rc vfd_swmr_group_writer \
../vfd_swmr_group_writer -q -c 1 -n $GROUP_attr_n -a 1 -A $options &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_group_reader \
../vfd_swmr_group_reader -q -c 1 -n $GROUP_attr_n -a 1 -A $options &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_group_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_group_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_group_writer.{out,rc}
rm -f vfd_swmr_group_reader.*.{out,rc}
done
# The following tests are for add/del/modify attributes for
# groups created with the old-style.
# Check https://portal.hdfgroup.org/display/HDF5/Groups for
# the detailed group implementation note.
# The 'compact' and 'compact-del' are the attribute addition
# and deletion tests. Other test names have the same meaning
# as those of the new-style group tests.
#
os_grp_attr_list=(
"compact"
"compact-del"
"modify"
"add-vstr"
"remove-vstr"
"modify-vstr"
"add-ohr-block"
"del-ohr-block"
)
os_grp_sub_attr_list=(
"modify"
"remove-vstr"
"modify-vstr"
"del-ohr-block"
)
if [[ "$HDF5TestExpress" -gt 0 ]] ; then #Setting for standard run
os_grp_attr_list=("${os_grp_sub_attr_list[@]}")
fi
for options in ${os_grp_attr_list[*]}; do
if [ ${do_os_groups_attrs:-no} = no ]; then
continue
fi
echo launch vfd_swmr_group attribute with old-style group: $options
catch_out_err_and_rc vfd_swmr_group_writer \
../vfd_swmr_group_writer -q -G -c 1 -n $GROUP_attr_n -a 1 -A $options &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_group_reader \
../vfd_swmr_group_reader -q -G -c 1 -n $GROUP_attr_n -a 1 -A $options &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_group_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_group_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_group_writer.{out,rc}
rm -f vfd_swmr_group_reader.*.{out,rc}
done
# The group operation test takes longer.
# So for the quick run, we
# shorten the number of tests.
# The essential features are covered.
grp_op_list=(
"grp-creation"
"grp-deletion"
"grp-move"
"grp-ins-links"
"grp-del-links"
"grp-compact-t-dense"
"grp-dense-t-compact"
)
grp_sub_op_list=(
"grp-move"
"grp-dense-t-compact"
)
if [[ "$HDF5TestExpress" -gt 1 ]] ; then #Setting for express run
grp_op_list=("${grp_sub_op_list[@]}")
fi
for options in ${grp_op_list[*]}; do
if [ ${do_groups_ops:-no} = no ]; then
continue
fi
echo launch vfd_swmr_group operations: $options
catch_out_err_and_rc vfd_swmr_group_writer \
../vfd_swmr_group_writer -q -c 1 -n $GROUP_op_n -O $options &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_group_reader \
../vfd_swmr_group_reader -q -c 1 -n $GROUP_op_n -O $options &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_group_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_group_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_group_writer.{out,rc}
rm -f vfd_swmr_group_reader.*.{out,rc}
done
# Test the group operations for old-style
os_grp_op_list=(
"grp-creation"
"grp-deletion"
"grp-move"
"grp-ins-links"
"grp-del-links"
)
os_grp_sub_op_list=(
"grp-move"
"grp-ins-links"
"grp-del-links"
)
if [[ "$HDF5TestExpress" -gt 1 ]] ; then #Setting for express run
os_grp_op_list=("${os_grp_sub_op_list[@]}")
fi
for options in ${os_grp_op_list[*]}; do
if [ ${do_os_groups_ops:-no} = no ]; then
continue
fi
echo launch vfd_swmr_group operations with old-style group: $options
catch_out_err_and_rc vfd_swmr_group_writer \
../vfd_swmr_group_writer -q -G -c 1 -n $GROUP_op_n -O $options &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_group_reader \
../vfd_swmr_group_reader -q -G -c 1 -n $GROUP_op_n -O $options &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_group_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_group_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_group_writer.{out,rc}
rm -f vfd_swmr_group_reader.*.{out,rc}
done
for options in "-d 1" "-d 1 -F" "-d 2" "-d 2 -F" "-d 1 -V" "-d 1 -M" "-d 1 -V -F" "-d 1 -M -F"; do
if [ ${do_many_small:-no} = no ]; then
continue
fi
#
# Test many small datasets of one and two dimensions.
#
# Perform 50 iterations on 1000 extensible datasets configured with
# 16x16 chunks of 32-bit unsigned integer elements,
# expanding each dataset by a chunk in one dimension (up to 50x1
# 16x16 chunks) on each iteration.
#
# Perform the test again, extending each dataset
# in *two* dimensions (up to 50x50 16x16 chunks).
#
echo launch vfd_swmr_bigset_writer many small, options $options
catch_out_err_and_rc vfd_swmr_bigset_writer \
../vfd_swmr_bigset_writer -n $BIGSET_n $options -s $BIGSET_many_s -r 16 -c 16 -q &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_bigset_reader \
../vfd_swmr_bigset_reader -n $BIGSET_n $options -s $BIGSET_many_s -r 16 -c 16 -q -W &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
kill -USR1 $(cat vfd_swmr_bigset_writer.pid)
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_bigset_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_bigset_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_bigset_writer.{out,rc}
rm -f vfd_swmr_bigset_reader.*.{out,rc}
done
for options in "-d 1" "-d 1 -F" "-d 2" "-d 2 -F" "-d 1 -V" "-d 1 -M" "-d 1 -V -F" "-d 1 -M -F"; do
#
# Test a few big datasets of one and two dimensions.
#
# Perform 50 iterations on 5 extensible datasets configured with
# 256x256 chunks of 32-bit unsigned integer elements,
# expanding each dataset by a chunk in one dimension (up to 50x1
# 256x256 chunks) on each iteration.
#
# Perform the test again, extending each dataset
# in *two* dimensions (up to 50x50 256x256 chunks).
#
if [ ${do_few_big:-no} = no ]; then
continue
fi
echo launch vfd_swmr_bigset_writer few big, options $options
catch_out_err_and_rc vfd_swmr_bigset_writer \
../vfd_swmr_bigset_writer -n $BIGSET_n $options -s $BIGSET_few_s -r 256 -c 256 -q &
pid_writer=$!
catch_out_err_and_rc vfd_swmr_bigset_reader \
../vfd_swmr_bigset_reader -n $BIGSET_n $options -s $BIGSET_few_s -r 256 -c 256 -q -W &
pid_reader=$!
# Wait for the reader to finish before signalling the
# writer to quit: the writer holds the file open so that the
# reader will find the shadow file when it opens
# the .h5 file.
wait $pid_reader
kill -USR1 $(cat vfd_swmr_bigset_writer.pid)
wait $pid_writer
# Collect exit code of the reader
if [ $(cat vfd_swmr_bigset_reader.rc) -ne 0 ]; then
echo reader had error
nerrors=$((nerrors + 1))
fi
# Collect exit code of the writer
if [ $(cat vfd_swmr_bigset_writer.rc) -ne 0 ]; then
echo writer had error
nerrors=$((nerrors + 1))
fi
# Clean up output files
rm -f vfd_swmr_bigset_writer.{out,rc}
rm -f vfd_swmr_bigset_reader.*.{out,rc}
done
###############################################################################
## Report and exit
###############################################################################
cd ..
$DPRINT nerrors $nerrors nsofterrors $nsofterrors
if test $nerrors -eq 0 ; then
echo "VFD SWMR tests passed."
if test $nsofterrors -ne 0 ; then
echo
echo "${nsofterrors} expected errors occurred. Expected errors are ok."
fi
if test -z "$HDF5_NOCLEANUP"; then
# delete the test directory
rm -rf vfd_swmr_test
fi
exit 0
else
echo -n "VFD SWMR tests failed with $nerrors unexpected errors "
echo "and $nsofterrors expected errors. Expected errors are ok."
echo "Please report unexpected errors, they may indicate a bug."
exit 1
fi