Bug fix and minor code enhancement
Description:
Missing methods to read/write C++ String for an attribute and
a dataset.
Solution:
Added overloaded functions read and write to H5::Attribute and
H5::DataSet.
Also, added another constructor StrType so the need to separately
set the length of the string type can be eliminated. It's minor
but convenient.
Made some minor changes to make error messages more readable.
Platforms:
SunOS 5.7 (arabica)
Linux 2.4 (eirene)
IRIX 6.5.11 (modi4)
HPUX 11.00 (kelgia)
213 lines
7.0 KiB
C++
213 lines
7.0 KiB
C++
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
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* Copyright by the Board of Trustees of the University of Illinois. *
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* All rights reserved. *
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* *
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* This file is part of HDF5. The full HDF5 copyright notice, including *
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* terms governing use, modification, and redistribution, is contained in *
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* the files COPYING and Copyright.html. COPYING can be found at the root *
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* of the source code distribution tree; Copyright.html can be found at the *
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* root level of an installed copy of the electronic HDF5 document set and *
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* is linked from the top-level documents page. It can also be found at *
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* http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have *
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* access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. *
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* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
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#include <string>
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#ifdef OLD_HEADER_FILENAME
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#include <iostream.h>
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#else
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#include <iostream>
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#endif
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#include "H5Include.h"
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#include "H5RefCounter.h"
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#include "H5Exception.h"
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#include "H5IdComponent.h"
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#include "H5Idtemplates.h"
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#include "H5PropList.h"
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#include "H5Object.h"
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#include "H5FaccProp.h"
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#include "H5FcreatProp.h"
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#include "H5DxferProp.h"
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#include "H5DcreatProp.h"
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#include "H5CommonFG.h"
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#include "H5Group.h"
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#include "H5AbstractDs.h"
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#include "H5DataSpace.h"
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#include "H5DataSet.h"
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#include "H5File.h"
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#include "H5Alltypes.h"
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#ifndef H5_NO_NAMESPACE
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namespace H5 {
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#endif
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// Default constructor
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H5File::H5File() : IdComponent() {}
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// Creates or opens an HDF5 file depending on the parameter flags.
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H5File::H5File( const string& name, unsigned int flags, const FileCreatPropList& create_plist, const FileAccPropList& access_plist ) : IdComponent()
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{
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getFile( name.c_str(), flags, create_plist, access_plist );
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}
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H5File::H5File( const char* name, unsigned int flags, const FileCreatPropList& create_plist, const FileAccPropList& access_plist ) : IdComponent()
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{
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getFile( name, flags, create_plist, access_plist );
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}
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// This function is private and contains common code between the
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// constructors taking a string or a char*
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void H5File::getFile( const char* name, unsigned int flags, const FileCreatPropList& create_plist, const FileAccPropList& access_plist )
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{
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// These bits only set for creation, so if any of them are set,
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// create the file.
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if( flags & (H5F_ACC_EXCL|H5F_ACC_TRUNC|H5F_ACC_DEBUG ))
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{
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hid_t create_plist_id = create_plist.getId();
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hid_t access_plist_id = access_plist.getId();
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id = H5Fcreate( name, flags, create_plist_id, access_plist_id );
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if( id <= 0 ) // throw an exception when open/create fail
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{
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throw FileIException("H5File constructor", "H5Fcreate failed");
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}
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}
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// Open the file if none of the bits above are set.
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else
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{
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// use create_plist for access plist because of the default argument
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hid_t access_plist_id = create_plist.getId();
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id = H5Fopen( name, flags, access_plist_id );
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if( id <= 0 ) // throw an exception when open/create fail
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{
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throw FileIException("H5File constructor", "H5Fopen failed");
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}
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}
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}
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// Copy constructor: makes a copy of the original H5File object.
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H5File::H5File( const H5File& original ) : IdComponent( original ) {}
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// Determines whether a file specified by its name in HDF5 format
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bool H5File::isHdf5(const string& name )
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{
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return( isHdf5( name.c_str()) );
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}
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bool H5File::isHdf5(const char* name )
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{
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// Calls C routine H5Fis_hdf5 to determine whether the file is in
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// HDF5 format. It returns positive value, 0, or negative value
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htri_t ret_value = H5Fis_hdf5( name );
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if( ret_value > 0 )
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return true;
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else if( ret_value == 0 )
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return false;
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else // Raise exception when H5Fis_hdf5 returns a negative value
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{
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throw FileIException("H5File::isHdf5", "H5Fis_hdf5 returned negative value");
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}
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}
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// Get id of the location, which id the file id here; used by CommonFG
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// member functions
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hid_t H5File::getLocId() const
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{
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return( getId() );
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}
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// Reopens this file
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void H5File::reopen()
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{
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// reset the identifier of this H5File - send 'this' in so that
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// H5Fclose can be called appropriately
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try {
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resetIdComponent( this ); }
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catch (Exception close_error) { // thrown by p_close
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throw FileIException("H5File::reopen", close_error.getDetailMsg());
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}
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// call C routine to reopen the file - Note: not sure about this
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// does id need to be closed later? which id to be the parameter?
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id = H5Freopen( id );
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if( id <= 0 ) // Raise exception when H5Freopen returns a neg value
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{
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throw FileIException("H5File::reopen", "H5Freopen failed");
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}
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}
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// Returns the creation property list of this file
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FileCreatPropList H5File::getCreatePlist() const
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{
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hid_t create_plist_id = H5Fget_create_plist( id );
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// if H5Fget_create_plist returns a valid id, create and return
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// the FileCreatPropList object for this property list
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if( create_plist_id > 0 )
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{
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FileCreatPropList create_plist( create_plist_id );
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return( create_plist );
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}
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else
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{
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throw FileIException("H5File::getCreatePlist", "H5Fget_create_plist failed");
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}
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}
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// Returns the access property list of this file
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FileAccPropList H5File::getAccessPlist() const
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{
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hid_t access_plist_id = H5Fget_access_plist( id );
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// if H5Fget_access_plist returns a valid id, create and return
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// the FileAccPropList object for this property list
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if( access_plist_id > 0 )
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{
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FileAccPropList access_plist( access_plist_id );
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return access_plist;
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}
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else // Raise an exception
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{
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throw FileIException("H5File::getAccessPlist", "H5Fget_access_plist failed");
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}
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}
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// Calls the C API H5Fclose to close this file. Used by IdComponent::reset
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void H5File::p_close() const
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{
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herr_t ret_value = H5Fclose( id );
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if( ret_value < 0 )
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{
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throw FileIException(0, "H5Fclose failed");
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}
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}
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// Throw file exception; used in CommonFG implementation so that proper
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// exception can be thrown for file or group. The func_name is a member
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// function of CommonFG and "H5File::" will be inserted to indicate the
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// function called is an implementation of H5File
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void H5File::throwException(const string& func_name, const string& msg) const
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{
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string full_name = func_name;
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full_name.insert(0, "H5File::");
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throw FileIException(full_name, msg);
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}
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// The destructor of this instance calls IdComponent::reset to
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// reset its identifier - no longer true
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// Older compilers (baldric) don't support template member functions
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// and IdComponent::reset is one; so at this time, the resetId is not
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// a member function so it can be template to work around that problem.
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H5File::~H5File()
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{
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// The HDF5 file id will be closed properly
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try {
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resetIdComponent( this ); }
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catch (Exception close_error) { // thrown by p_close
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cerr << "H5File::~H5File - " << close_error.getDetailMsg() << endl;
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}
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}
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#ifndef H5_NO_NAMESPACE
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} // end namespace
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#endif
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