Did not provide default values for clang++ options.
Also, applied wrong values for the *_CPPFLAGS.
Solution:
Added default values for *_CXXFLAGS.
Fixed the *_CPPFLAGS values.
Tested: duck, swallow, quail with --eanble-production.
There is an interface incompatibility in the C library due to the renamed symbols in H5Ppublic.h.
Solution:
Bump the library interface version on the shared libraries (soname).
Tested: h5committested.
Description:
Mac has changed to use the clang/clang++ compilers but compiler settings for production, debug and profile
were not setup.
Solution:
Setup default values for PROD_CFLAGS, PROD_CPPFLAGS, DEBUG_CFLAGS, DEBUG_CPPFLAGS.
PROFILE_CFLAGS and PROFILE_CPPFLAGS were set too but clang does not -pg or such for
profiling. Need to fix it later.
Tested: duck, swallow, and quail using --enable-production.
- remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today.
- fix bug in t_mpi.c (HDFFV-8856)
tested with h5committest.
Bring r25215 from trunk to 1.8 branch:
Bring changes from Coverity branch back to trunk:
r20914:
Use HDstrncpy and HDstrncat! --gh
r20915:
Use HDstrncpy and HDstrncat! --gh
Tested on:
MacOSX/64 10.9.3 (amazon) w/gcc 4.9, FORTRAN, C++, multi-threads & parallel
(h5committested on the trunk)
Bring r25206 & r25207 from trunk to 1.8 branch:
r25206:
Add new warning flags for gcc 4.9.x
r25207:
Merge changes from Coverity branch to trunk:
r20907:
Original issue was #338.
Refactored code to clean up allocations consistantly, completely, check all returns, assign initialization values and handle errors.
Tested on:
MacOSX/64 10.9.3 (amazon) w/C++, FORTRAN & parallel
(h5committested on trunk)
Added compiler versions for mpich to settings file and configure summary.
For make installcheck, compile and run installed examples using the installed scripts. They
were being compiled but not run.
Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled.
Set flag to -O3 in production mode for Intel compilers other than those with specified other settings.
Gentoo patches:
Remove unnecessary setting of LD_LIBRARY_PATH from configure.
Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c.
Tested with h5committest on jam, koala, ostrich and platypus.
Bring r24864 from trunk to 1.8 branch:
Remove all traces of MPI-POSIX VFD and GPFS detection/code.
Remove remaining traces of stream VFD.
Remove testpar/t_posix_compliant test (it's not actually verifying anything).
Clean up H5D__mpio_opt_possible() further.
Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).
A few other small code cleanups.
Tested on:
Mac OSX/64 10.9.2 (amazon) w/parallel & serial
(daily tested on trunk)
rename H5V to H5VM since H5V is needed in the fastforward project for
view objects. The addition of view objects in the fastforward project
is expected to be brough into the trunk sometimes in the future, which
is why we need to make this change.
Tested: jam, koala, ostrich, platypus (h5committest)
Log from r24171:
Purpose: Fix problem with gcc 4.8
Description:
With optimization enabled, gcc 4.8 inserts garbage into the padding bytes of
floating point types when assigning from a literal constant. This caused
problems when H5detect.c scanned the bits in floating point types to determine
their properties.
Modified H5detect.c to scan for padding before further analyzing the type, and
to ignore all information in the padding areas. Also removed code that
temporarily disabled optimization.
Tested: jam, koala, ostrich, platypus (h5committest)
Bring r24101 & 24111 from trunk to 1.8 branch:
r24101:
=======
Description:
Clean up warnings, enable new compiler warning flag(s) and bring back
changes from Coverity branch:
r20813:
Remove the dead code as listed for coverity bug #1722. h5committested.
r20814:
Issue 69: Check return value and throw error if negative return. Also free datatype id on error
r20815:
Use HDstrncpy. --gh
r20816:
Replaced one last HDstrcat call with HDstrncat to resolve coverity issue 832.
r20817:
Use HDstrncpy and HDstrncat. --gh
r20818:
Purpose: Fix valgrind issues with h5jam
Description:
Modified h5jam to free strings strdup'd in parse_command_line before exit. Note
that they may still not be freed in case of error, due to the widespread use of
exit().
r20819:
Issue 80: change loop to use int as loop index.
r20820:
Maintenance: Fixed the bug found by coverity CID 788
There were two problems with this function:
1) it tried to unnecessary free NULL pointer
2) it tried to allocate c_name buffer that is done by H5Pget_class_name
r24111:
=======
Description:
Restrict GCC diagnostic pragmas to only gcc 4.6+
Tested on:
Mac OSX 10.8.4 (amazon) w/gcc 4.8.1, C++ & FORTRAN
(too minor to require h5committest)
The new gcc v4.8.* compilers does not work well with dt_arith which failed
in production mode.
Solution:
A temporary patch by removing any optimization (-O*) from the PROD_CFLAGS
so that dt_arith will pass for now. A more through investigation is needed.
Tested: Jam, platypus and Koala where it failed and now passes.
Need to update libtool version number for v1.8.11 since two functions,
H5Pget_dxpl_multi and H5Pset_dxpl_multi were removed. Then v1.8 is now
v1.8.12-xxx and needed an update to.
config/lt_vers.am:
libtool information is changed to 8.0.1 because it is a revision
different from v1.8.10.
configure:
src/Makefile.in:
hl/src/Makefile.in:
hl/c++/src/Makefile.in:
hl/fortran/src/Makefile.in:
c++/src/Makefile.in:
fortran/src/Makefile.in:
README.txt:
autogenerated by bin/reconfiure.
Tested: h5committest, then visual inspect that the libhdf5.so.x.y.z is
changed accordingly.
Built in duck by hand and see it changes to libhdf5.8.dylib too.
Use Clang as the compiler for the Mac platform.
Changed all Mac to use clang/clang++ as the default C and CXX compilers if
not provided by the user. Still use gfortran as the default fortran
compiler since Apple does not provide any fortran compiler.
HDFFV-8245: bug fix. Snow Leopard (darwin 10.X) does not have clang++.
Reversed it to use gcc/g++ as the default C and CXX compilers for Darwin 10.X
systems.
Tested: h5committest plus duck (darwin 11), wren (darwin 12) and fred
(darwin 10).
