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56 Commits

Author SHA1 Message Date
Dana Robinson
63647cd363 Merge of recent develop work to 1.10 branch. 
Fixes for:
* HDFFV-10247 (autotools Fortran long double bug)
* HDFFV-10248 (autotools deprecated debug/production tweak)
* HDFFV-10250 (-fno-omit-frame-pointer w/ symbols)
* Disabled missing parameter warnings in Java constant code
* Added H5I_VFL ID checks to tmisc.c
* Added 'get a dummy VFD' call to h5test library
 2017-07-05 11:35:03 -07:00
Allen Byrne
618a6adb64 Reduce warnings 2017-05-25 15:55:55 -05:00
Allen Byrne
635e8c5377 merge from develop and apply HDFFV-8611 2017-05-24 15:00:51 -05:00
Allen Byrne
539f252fc8 Correct name of native function 2017-04-25 09:40:55 -05:00
Allen Byrne
2599c23164 Change signature of H5PLget_size 2017-04-25 09:40:54 -05:00
Allen Byrne
db4dd5be86 LDFLAGS module forces .so lib to be built on osx instead of .dylib 2017-04-18 14:14:20 -05:00
Allen Byrne
1c782f1ae1 java jni lib also needs to avoid the version-info 2017-04-18 14:14:09 -05:00
Allen Byrne
d5da45e168 Add plugin options for libs 2017-04-18 14:13:22 -05:00
lrknox
25ec07450a Change copyright headers to replace url referring to file to be removed 
and replace it with new url for COPYING file.

Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
 2017-04-14 11:54:16 -05:00
lrknox
b03e41146a Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_10 2017-04-13 16:28:03 -05:00
Allen Byrne
606529f5e0 Due to HDFVIEW-19 add read VL as string function 2017-04-12 17:21:43 -05:00
Allen Byrne
e76d9217f4 Fix URL name 2017-04-11 15:12:27 -05:00
Allen Byrne
8a9e4b94c3 Fix URL name 2017-04-11 15:10:02 -05:00
Allen Byrne
38b1b534c9 HDFFV-10143 add missing javadoc param 2017-04-06 15:01:30 -05:00
Allen Byrne
4b11c4fd51 HDFFV-10143 add missing javadoc param 2017-04-06 15:00:48 -05:00
Allen Byrne
f9199536d0 HDFFV-10143 Add plugin APIs to Java interface 2017-04-03 14:12:54 -05:00
Allen Byrne
4bd667bfde HDFFV-10143 Add plugin APIs to Java interface 2017-04-03 14:06:47 -05:00
lrknox
972344e231 Merge bin/h5vers changes from develop. 
Pull version from configure for version test in h5repack_plugin.sh.in
Update version to 1.10.2-snap0 for hdf5_1_10 branch.
 2017-03-23 20:03:27 -05:00
lrknox
fa5ca5272d Remove extra space added by h5vers to version string in H5.java, which 
then failed to match the pattern after the first run.
 2017-03-21 11:40:11 -05:00
lrknox
7e7121fec6 Remove incorrect " marks added to java files by bin/h5vers. 
Pull version from configure for version test in h5repack_plugin.sh.in
 2017-03-21 10:57:40 -05:00
lrknox
cd8ec2cc44 Extend h5vers to update version strings in java files and h5repack 
version test expected output file.

Update version on develop branch to 1.11.0.

 Please enter the commit message for your changes. Lines starting
 2017-03-20 17:14:16 -05:00
lrknox
9187d41af6 Update version numbers in HDF5config.cmake and 2 java files. h5vers 
script missed them, will need updating.
 2017-03-17 13:14:08 -05:00
Quincey Koziol
0313cbb91d Final merge of page buffering branch to develop 2017-03-13 21:30:37 -07:00
Quincey Koziol
a28b65bb9e Clean up whitespace 2017-02-07 09:18:57 -08:00
Allen Byrne
177c050891 HDFFV-9875 Fix target exports and add static tools pdb files 2017-02-02 12:09:10 -06:00
Allen Byrne
c3463d800d HDFFV-10118 fixed plugin tests for tools 2017-01-20 14:23:41 -06:00
Allen Byrne
556ff06975 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop) 
* commit 'bd85e57904f1f943774bb99ea5e8b0d074db0edb':
  tools/test/h5diff/testh5diff.sh.in:          Add code to delete copies of test .h5 files copied from          tools/testfiles/vds to tools/test/h5diff/testfiles when running          "make check" for an in-source build.
 2017-01-13 10:57:26 -06:00
lrknox
8452976de5 tools/test/h5diff/testh5diff.sh.in: 
Add code to delete copies of test .h5 files copied from
         tools/testfiles/vds to tools/test/h5diff/testfiles when running
         "make check" for an in-source build.

    tools/test/misc/testh5repart.sh.in:
         Change the name of the temporary test directory from "testfiles"
         which is also used for 2 h5mkgrp test files under source control to
         "testrepart" to avoid deleting source controlled files when running
         "make check" in the source directory.

    Fix test scripts that remove source-controlled files during "make check" when run in-source.
    Fix test scripts that don't remove test files because they add files to test directories but don't remove them if the build directories are the same as the source directory.

    Fix any test source file or Makefile.am files for tests that leave data files are removed by neither "make check" nor "make distclean".
 2017-01-12 22:20:11 -06:00
Allen Byrne
e1bcae8a6a Update cmake min version and cmake command convention 2017-01-10 17:10:03 -06:00
Quincey Koziol
fc69eeb991 Bring Java SWMR changes from revise_chunks to develop branch 2016-12-17 22:21:48 -08:00
Quincey Koziol
527f28333c Another Java oversight (sorry, don't have Java configured on my Mac) 2016-12-02 12:46:42 -08:00
Quincey Koziol
65be68a17d Add some Java methods that were missed earlier. 2016-11-30 15:12:35 -08:00
Quincey Koziol
3b0c2b24da Bring over support for retrying metadata cache entry loads, along with all the 
supporting metadata cache callback changes, etc.
 2016-11-20 04:24:57 -08:00
Dana Robinson
8eaa0af305 Changed the return type of H5Pget_driver_info() from void * to 
const void *. Fixes HDFFV-10017.
 2016-11-05 00:31:26 -04:00
Allen Byrne
3ee36553b9 Add support for namespace and add tools to binaries config 2016-10-14 11:22:22 -05:00
Allen Byrne
ef2e93d239 Eliminate unreferenced local variable warning 2016-09-19 14:04:40 -05:00
Allen Byrne
241dc68b48 [svn-r30315] HDFFV-9972: Fix test reference and change default for H5Iget_name in JNI API. 2016-08-22 13:07:01 -05:00
Allen Byrne
737bb56735 [svn-r30313] HDFFV-9972: unsatisfied link error under debug on Windows. 
Added windows name suffix for debug to CMake cmd_arg for examples and test.
Fix issues discovered under debug testing;
   Create a version of H5Iget_name that correctly returns the name.
   Rework PIN_JAVA_STRING macro and usage to eliminate possible memory leaks by using if-else instead of mid-routine return.
   Update example to use new H5Iget_name API.
   
   Tested: windows under debug
 2016-08-22 12:05:00 -05:00
Allen Byrne
9b597a4855 [svn-r30213] Add H5Aread_complex for reading arrays and compounds that are not VL strings. 2016-07-20 14:40:42 -05:00
Quincey Koziol
d3396a7953 [svn-r30075] Description: 
Bring object/dataset/group/named datatype features from revise_chunks
branch to trunk.  Also CMake support for h5format_convert and a bunch of
misc. cleanups.

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
 2016-06-14 18:07:03 -05:00
Allen Byrne
aee288c19d [svn-r30048] refactor duplicate release string calls 2016-06-07 14:04:20 -05:00
Allen Byrne
f1633a5fe2 [svn-r29873] Java add missing APIs. 
Adjust whitespace in H5.java for exception indentation.
Adjust whitespace in JNI for function signature formatting.
 2016-05-04 10:52:40 -05:00
Allen Byrne
1335631f3d [svn-r29673] Fix typo of var name 2016-04-08 12:44:36 -05:00
Allen Byrne
261f8c8361 [svn-r29560] Remove list and check of flags, defer to library function for checking, which will return an error. That error then produces a HDF5FunctionArgument exception instead of IllegalArgument exception. 2016-03-24 12:21:04 -05:00
Allen Byrne
b8e163a845 [svn-r29465] Fix issue with .classes dir not getting created for java by adding mkdir .classes to configure. 2016-03-17 11:47:21 -05:00
Allen Byrne
83acb60e39 [svn-r29463] qualify .classes with $(top_builddir) 2016-03-17 09:29:18 -05:00
Allen Byrne
1f5286ddf2 [svn-r29447] Correct signature of H5Pexist to return boolean 2016-03-16 11:58:03 -05:00
Allen Byrne
f56bf61b8c [svn-r29407] Correct source location 2016-03-14 14:59:06 -05:00
Allen Byrne
f9dd7f1a80 [svn-r29403] Correct file location and add overview to makefile 2016-03-14 13:32:31 -05:00
Allen Byrne
8d9b56a7e8 [svn-r29400] HDFFV-9717: add overview section to javadocs 2016-03-14 12:56:15 -05:00