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219 Commits

Author SHA1 Message Date
lrknox
b9a27fddaa Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1 
* commit '0d05cb607e5951f3a28a101be56ca194022a7fa1':
  Reverted addition of The HDF Group copyright headers to 3rd party CMake files for Java.
  Add Copyright headers to 90 files (mostly .cmake files) without Copyright headers.
  Add "Copyright by The HDF Group."" to copyright header.
 2017-04-14 16:40:52 -05:00
lrknox
25ec07450a Change copyright headers to replace url referring to file to be removed 
and replace it with new url for COPYING file.

Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
 2017-04-14 11:54:16 -05:00
Allen Byrne
244faaa0d0 HDFFV-10094: upgrade cmake command conventions 
Also converted tests to use macros
 2017-01-11 14:02:34 -06:00
Allen Byrne
e1bcae8a6a Update cmake min version and cmake command convention 2017-01-10 17:10:03 -06:00
M. Scot Breitenfeld
7b056aadff Added SEQUENCE to derived types for NAG: 
Section 81 of the compiler manual, e.g. at

http://www.nag.co.uk/nagware/np/r61_doc/np61_manual.pdf

covers details about the compiler's internal representations, including

"
Fortran derived types are translated into C structs.
If BIND(C) or SEQUENCE is used, the order of the items within
the struct is the same as the order within the derived type definition.
Otherwise, the order of items is permuted to
put larger types at the front of the struct so as to improve alignment
and reduce storage; the C output code can be
inspected to determine the ordering used.
"

Removed INTENT(IN) to fix segfaults in C APIs for TYPE(C_PTR).

Tested: NAG (gnu)
 2016-09-23 11:31:43 -05:00
M. Scot Breitenfeld
3c37126585 Removed the use of hard-coded integer KINDs. 2016-09-22 15:24:35 -05:00
Scot Breitenfeld
3e5a61c9ff [svn-r30154] Fixed inequality comparsions for reals in HL fortran tests 
(HDFFV-9949, MSB, 7/7/16)
 2016-07-07 08:36:50 -05:00
Scot Breitenfeld
8ca7944380 [svn-r30120] Fixed compilation failure on emu due to moving testing subroutines into a module. 
Tested: emu and jelly (gnu)
 2016-06-29 14:21:19 -05:00
Quincey Koziol
83724bd787 [svn-r30113] Description: 
Clean up warnings (from 2774 -> 1560, with my standard debug build)

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
 2016-06-28 16:53:48 -05:00
Allen Byrne
949853b047 [svn-r29864] Add ignore test names for Valgrind process. 
Add files to clear test generated files tests.
 2016-05-04 10:19:34 -05:00
Scot Breitenfeld
77a806591d [svn-r29653] fixed A variable that is specified as an argument to the intrinsic procedure C_LOC must either have type and type parameters that are interoperable with a C type, or be a nonpolymorphic, scalar variable with no length type parameters. 2016-04-07 08:54:48 -05:00
Scot Breitenfeld
01f479abb4 [svn-r29648] FIX: HDFFV-8486 
h5tbmake_table_f is missing the fill_data parameter (which is in the C counterpart)

ADDED NEW API: h5tbread_table_f

Tested: platypus, ostrich
 2016-04-06 13:07:17 -05:00
Scot Breitenfeld
54d598aa44 [svn-r29646] FIX: HDFFV-9522 
Add support for variable length datatypes in the High Level H5LT Fortran APIs

Tested: platypus (gnu)
 2016-04-06 10:17:02 -05:00
Dana Robinson
1b7b09b081 [svn-r29337] Cleaning warnings in Fortran code. 
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           autotools serial w/ Fortran
 2016-03-08 02:34:43 -05:00
Dana Robinson
9af344117c [svn-r27794] Reintegration merge of features/autotools_rework branch with trunk 
NOTES:

- Developers will have to run autogen.sh before building with the autotools.

- autogen.sh takes the -p option to mimic the old bin/reconfigure behavior.

- The generated error, overflow and version headers have been left in place.

- The generated H5LT parser code has also been left in place.

- There are no changes for CMake users at this time.

Tested on: h5committest
 2015-09-15 15:38:57 -05:00
Scot Breitenfeld
672e6bd8a9 [svn-r27754] HDFFV-548:H5LT patches for F90 Lite API in 1.8.0 Beta 
tested: h5committest
 2015-09-10 16:18:17 -05:00
Dana Robinson
59aa015d9f [svn-r27638] Merged r27500-27631 from trunk. 2015-08-31 23:36:17 -05:00
Scot Breitenfeld
e6f9fc5f7f [svn-r27625] Added preprocessor commands for PGI compiler. 
tested: h5committest
 2015-08-31 13:49:17 -05:00
Allen Byrne
6635d4c003 [svn-r27586] HDFFV-9497: Add back ALLOW_UNSUPPORTED OPTION. 
Added new option SKIP_HDF5_FORTRAN_SHARED
 2015-08-26 11:48:42 -05:00
Scot Breitenfeld
1436a07905 [svn-r27537] Added new FCCPPFLAGS to avoid passing CPPFLAGS to the fortran pre-processor compiler (This mainly causes issues with the xlf compilers) 
Tested: h5committest
 2015-08-20 11:01:26 -05:00
Scot Breitenfeld
d06fee7bd2 [svn-r27517] Removed all perl scripts from configure. 
Tested: h5committest
 2015-08-17 16:12:03 -05:00
Dana Robinson
c27d180848 [svn-r27507] Merge of r27237-27500 from the trunk. 
Tested w/ h5committest

NOTES: - The manifest may still be messed up.
       - Cmake fails since the dual binary work needs to be merged with
         this repo's CMake externals.
 2015-08-14 14:58:54 -05:00
Scot Breitenfeld
caf0e7692a [svn-r27493] Trying again to merge the F2003_v1.10 branch to the trunk. 
Tested: h5committest --PASSED--
 2015-08-11 09:35:30 -05:00
Scot Breitenfeld
3b4696ccd1 [svn-r27489] reverted merge of branch 2015-08-10 20:22:33 -05:00
Scot Breitenfeld
a9bef45c75 [svn-r27470] svn merge -r27425:27460 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-08-05 16:35:30 -05:00
Allen Byrne
9e2434625d [svn-r27469] Merge from trunk with dual-binary CMake code. 
Tested: local linux with CMake
 2015-08-05 16:01:07 -05:00
Scot Breitenfeld
b67a6727cf [svn-r27359] Fixed Cmake to handle autogenerated Fortran HL APIs 2015-07-09 10:01:11 -05:00
Scot Breitenfeld
fc42b3efaa [svn-r27358] Fixed test to handle DOUBLE PRECISION that was promoted using compiler options. 2015-07-09 09:36:50 -05:00
Scot Breitenfeld
b0afa2ab61 [svn-r27355] added generation of HL Fortran Interfaces for REALs 2015-07-08 17:09:50 -05:00
Scot Breitenfeld
2a567e8155 [svn-r27326] Working version of cmake on linux. 2015-07-02 14:04:25 -05:00
Scot Breitenfeld
85bcb77904 [svn-r27221] Reworked Fortran autools REAL KIND detection. 2015-06-16 16:47:00 -05:00
Scot Breitenfeld
f2d14c76b8 [svn-r27186] added fix for jam with promoted reals and integers 2015-06-10 14:15:08 -05:00
Scot Breitenfeld
62401ac7c6 [svn-r27167] more DT fixes 2015-06-09 12:05:09 -05:00
Scot Breitenfeld
32703c9fc5 [svn-r27164] various bug fixes for DT 2015-06-08 16:13:15 -05:00
Scot Breitenfeld
8641814c4e [svn-r27154] fixed issue with mis-matching long double between Fortran and C 2015-06-05 17:17:13 -05:00
Scot Breitenfeld
043173a689 [svn-r27151] fixed __float128 errors 2015-06-04 15:26:02 -05:00
Scot Breitenfeld
4d500d4902 [svn-r27140] fixed interger*16 support 2015-06-03 09:13:58 -05:00
Scot Breitenfeld
52e5579fba [svn-r27122] removed dependency on generatored fortran source code 2015-05-28 11:53:15 -05:00
Scot Breitenfeld
244784ab2c [svn-r27115] Moved testing KINDs and SIZEOFs to configure. 2015-05-27 17:07:18 -05:00
Dana Robinson
984ecb72c2 [svn-r27038] Merge of r26393-27031 from the trunk. 
Tested on 64-bit linux VM w/ C++ and Fortran 2003
 2015-05-07 16:05:14 -05:00
Scot Breitenfeld
213aa4d060 [svn-r26976] Added TARGET. 2015-04-30 08:54:48 -05:00
Scot Breitenfeld
68e4b6ef39 [svn-r26970] Added new pointer APIs for h5ltmake_dataset ahd h5ltread_dataset. 2015-04-29 15:12:34 -05:00
Scot Breitenfeld
f0c4d55f91 [svn-r26908] Added missing c_long_double interfaces, now handles promotion of reals and integers to 8 bytes, added C wrappers that take pointers from Fortran. 2015-04-23 15:12:13 -05:00
Scot Breitenfeld
cfeb1509c2 [svn-r26881] Added BIND(C) to the Fortran HL APIs, and fixed the issue with -r8 (or equiv.) being specified. 2015-04-22 09:37:02 -05:00
Scot Breitenfeld
5e6d18e5be [svn-r26869] removed the --enable-fortran2003 option, it is now just --enable-fortran 2015-04-21 13:33:25 -05:00
Scot Breitenfeld
0cc9b0c79f [svn-r26825] Added include for preprocessing fortran files with configure definitions 2015-04-16 13:36:34 -05:00
Larry Knox
3032f3adf3 [svn-r26711] Recommitting revisions 26669 and 26670, removing VPATH and redundant /usr/include and lib in fcompile and link flags checks, now that I have run reconfigure. 
Also changed paths to h5cc, etc. in scripts to run installed examples from relative paths to absolute paths.

Tested with h5committest.
 2015-04-02 16:07:53 -05:00
Allen Byrne
45577d5693 [svn-r26660] HDFFV-9131: autotols rework 
Remove CXX_CONDITIONAL
remove unneeded/obsolete sections.

h5commtitest
 2015-03-30 13:55:21 -05:00
Allen Byrne
451a91e53b [svn-r26594] Merge macros and fortran changes from dual_binary feature. 
Tested: local linux
 2015-03-25 17:08:46 -05:00
Jerome Soumagne
1cd7c16a9d [svn-r26509] Run reconfigure after merges from autotools_rework branch. 2015-03-20 14:15:51 -05:00