configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.
- remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today.
- fix bug in t_mpi.c (HDFFV-8856)
tested with h5committest.
Added instead configure variable hardcode_into_lib=no. This removes rpath from lib files on Linux and solaris machines.
Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
e library files, was checked into trunk in September 2013, but not into the 1.8 branch. part of
the code was merged to v1.8 in the interim for fortran, but not for hl or c++. The rest is mer
ged in this revision.
The --disable-sharedlib-rpath option seems to have no effect on non-Linux platforms.
Tested with h5committest on jam, koala, ostrich and platypus.
Tested with --disble-sharedlib-rpath option on jam, platypus, emu and quail.
Absence of rpaths verified on jam and platypus.
Added compiler versions for mpich to settings file and configure summary.
For make installcheck, compile and run installed examples using the installed scripts. They
were being compiled but not run.
Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled.
Set flag to -O3 in production mode for Intel compilers other than those with specified other settings.
Gentoo patches:
Remove unnecessary setting of LD_LIBRARY_PATH from configure.
Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c.
Tested with h5committest on jam, koala, ostrich and platypus.
AIX compiler complains that:
ex_ds1.f90, line 89.16: 1512-050 (W) Field separator is missing, in literal FMT specifier, after edit descriptor X. A comma is assumed.
Line 89:
WRITE(*,'(/,5X 3(A,1X),I0,A,L1)') 'Is',TRIM(DS_1_NAME),&
Solution:
Added the missing comma after "5X".
Tested:
AIX system.
Bring r24864 from trunk to 1.8 branch:
Remove all traces of MPI-POSIX VFD and GPFS detection/code.
Remove remaining traces of stream VFD.
Remove testpar/t_posix_compliant test (it's not actually verifying anything).
Clean up H5D__mpio_opt_possible() further.
Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).
A few other small code cleanups.
Tested on:
Mac OSX/64 10.9.2 (amazon) w/parallel & serial
(daily tested on trunk)
Bring r24020 from trunk to 1.8 branch:
Clean up compiler warnings
Tested on:
Mac OSX/64 10.8.4 (amazon) w/C++ & FORTRAN
(too minor to require h5committest)
Need to update libtool version number for v1.8.11 since two functions,
H5Pget_dxpl_multi and H5Pset_dxpl_multi were removed. Then v1.8 is now
v1.8.12-xxx and needed an update to.
config/lt_vers.am:
libtool information is changed to 8.0.1 because it is a revision
different from v1.8.10.
configure:
src/Makefile.in:
hl/src/Makefile.in:
hl/c++/src/Makefile.in:
hl/fortran/src/Makefile.in:
c++/src/Makefile.in:
fortran/src/Makefile.in:
README.txt:
autogenerated by bin/reconfiure.
Tested: h5committest, then visual inspect that the libhdf5.so.x.y.z is
changed accordingly.
Built in duck by hand and see it changes to libhdf5.8.dylib too.
Convert configure.in to configure.ac.
Align TESTS usage with autotools convention.
Update all references from configure.in to configure.ac
Tested: h5committest
Added code to install README in share/hdf5_examples
Set permissions on README file to rw-r--r--.
Tested with h5committest, make install and make uninstall.
Fix HDFFV-7592
"Remove PACKEDBITS option from autotools files"
Description:
The code for h5dump's packed bits feature was
conditionally compiled in via this option during its
'beta' release in 1.8.5. Now that the feature is fully
supported, h5dump has since been changed to always
compile the packed bits code (having removed the #ifdef
H5_HAVE_H5DUMP_PACKED_BITS checks), so this option in
configure is no longer needed.
This commit removes the --enable-h5dump-packed-bits
configure option, including the help summary from
'./configure --help' and the libhdf5.settings output
summary, the PACKED_BITS Makefile variable, and the
definition of H5_HAVE_H5DUMP_PACKED_BITS define in
appropriate pubconf header files (which has already
been removed from use in source code as of r20722).
Note that this option was never added to the trunk,
thus this commit only need occur on the 1.8 branch.
Tested:
- Configure output, help, & summary verified on jam
- h5committested
