in h5dump.c just initialized the values for the formatting struct.
in h5tools.c made some changes in the printing area to get the dump output to
look closer to what we wanted. the strings are currently not printing correctly.
also removed the program type variable from here.
Added -V option for displaying version information.
h5tools.c:
Added print_version routine to display version information.
h5tools.h:
Added print_version prototype.
with out the square braces. also the formatting for the compound types
in the dataset part section has been corrected.
still need to update the expected outputs so there will be some errors until
I get that all checked in...
** configure.in
** configure [REGENERATED]
** src/H5private.h
** src/H5public.h
** src/Makefile.in
Generates an H5pubconf.h file which is just like H5config.h except all
the preprocessor symbols have `H5_' prepended. This was done so that
the configuration results can be used in public header files without
polluting the namespace.
** src/H5.c
Added H5I_REFERENCE and H5I_VFL to the API tracing code so their names
are printed instead of just numbers.
** src/H5FDstdio.c
** tools/h5import.c
** tools/h5repart.c
** tools/pdb2hdf.c
Changed to use the `H5_' versions of configure results since these
files include only the public API.
** test/big.c
Removed a compiler warning.
** test/h5test.c
Removed unused code.
had to change some of the functions in the h5findshd.c file since we didn't
have the globals anymore. these changes also affected the h5toh5.c file.
passes all tests on unix
** bin/rpmsync
** config/depend1.in
Tweaks for versions of `make' that can't search directories.
** examples/Dependencies
** src/Dependencies
** test/Dependencies
** testpar/Dependencies
** tools/Dependencies
Regenerated all these with more complete path names.
so i moved the dumper stuff out to the libary. Had to change some functions
in h5findshd so they would stop using globals that shouldn't be defined in the
lib. I will remove the globals next. also the h5findshd.c has an extra member
to the struct for that objects in the table so i added that into the appropriate place.
the dumper is working ok now but the h5toh4 is still broken.
----------------------
./MANIFEST
./configure.in
./configure [REGENERATED]
Added more checking for `make' features.
./Makefile.in
./doc/Makefile.in
./doc/html/Makefile.in
./doc/html/Tutor/Makefile.in
./examples/Makefile.in
./pablo/Makefile.in
./src/Makefile.in
./test/Makefile.in
./testpar/Makefile.in
./tools/Makefile.in
./config/commence.in
./config/conclude.in
./config/depend.in [REMOVED]
./config/depend1.in [NEW]
./config/depend2.in [NEW]
./config/depend3.in [NEW]
./config/depend4.in [NEW]
./config/dependN.in [NEW]
The directory search stuff was moved into commence.in, thereby
shortening the Makefile.in prologues.
./doc/html/Dependencies [NEW]
./doc/html/Tutor/Dependencies [NEW]
./examples/Dependencies [NEW]
./src/Dependencies [NEW]
./test/Dependencies [NEW]
./testpar/Dependencies [NEW]
./tools/Dependencies [NEW]
The `.distdep' files were all renamed to `Dependencies' to make them
more obvious. They are required (but may be empty) in every directory
that has a Makefile.in that ends with @CONCLUDE@ (you'll get an
obvious error from make if you forgot to create one).
./bin/trace
./src/H5.c
Added H5E_major_t and H5E_minor_t although tracing only prints the
integer value.
./src/H5E.c
./src/H5Epublic.h
Added tracing information.
./src/H5FDcore.c
./src/H5FDfamily.c
./src/H5FDgass.c
./src/H5FDmpio.c
./src/H5FDsec2.c
./src/H5FDstdio.c
Fixed places where FUNC_LEAVE() evaluated it's argument more than
once.
Added tracing information.
Wrapped long lines.
./config/gnu-flags
Fixed a syntax error when we don't have a gnu compiler.
Bug fix.
Description:
If the H4DUMP (hdp) is not executable for some reasons (e.g., not
in $PATH), it produced zero sized files. The test script did not
detect the abnormality but compared the zero sized files the same
and concluded the test passed.
Solution:
Test if H4DUMP can produce valid output. If not, print warning
messages. Also check the size of output files to make sure they
are reasonably valid.
Platform tested:
Linux.
----------------------
./configure.in
./src/H5config.h.in [REGENERATED]
The /usr/ncsa/{include,lib} directories are only added if they
actually exist. This fixes a warning on some systems.
Checks for the <pdb.h> header file and also for either the PDB or Silo
library, and if found prepares to compile the pdb2hdf program.
./config/distdep
Relative path names for include files are changed to base names since
the makefile contains the logic for searching and since it's likely
that building the .distdep files happed from a location other than
where they would be used in the file system.
./config/conclude.in
Fixed shell errors when `for' loops iterate over nothing for the
`uninstall' target.
./src/H5D.c
./src/H5Oefl.c
File names for the external files are added to the heap when the
dataset is created instead of when the object header is written. This
fixes a rare infinite recursion bug.
./src/H5FD.c
./src/H5FDpublic.h
Optimization to the free list causes H5FD_alloc() usage to go from >10
seconds to <0.4 second for one example (converting a 30MB equation of
state file from PDB to HDF5 format). The optimization is to simply
keep track of the largest item in the free list and not search the
free list when the largest item is not big enough to satisfy the
request.
./src/H5FDcore.c
./src/H5FDcore.h
./test/h5test.c
If the `backing_store' property is true then a flush causes the entire
contents of memory to be written to the specified file. This is in
preparation for the ASCI/red optimizations and is currently tested by
the pdb2hdf `--cached' switch.
./src/H5Odtypes.c
Wrapped three long lines.
./tools/Makefile.in
./tools/pdb2hdf.c [NEW]
A PDB-to-HDF5 translator. It only translates meta data -- the
resulting HDF5 points into the PDB file for the raw data.
----------------------
./src/H5FDcore.c
Includes private headers instead of public in order to use the
`UNUSED' macro.
./src/H5FDpublic.h
Includes H5public.h just in case.
./src/H5P.c
Removed two unused variables in H5P_copy()
./src/H5FDgass.h
Fixed a C++ comment after a `#endif'
./src/Makefile.in
The H5FDgass.h file is public and must be installed in order for
applications to be able to use HDF5.
./tools/h5tools.c
Removed an unused variable.
----------------------
./src/H5public.h
We undefine a bunch of things that could get redefined in the config
file because some customers have applications that include headers
from multiple packages, all of which might be using autoconf.
Include <stdint.h> for the C9x types.
./test/h5test.h
More flushing of stdout for when testing is redirected down a pipe.
./tools/h5ls.c
Added a `-S' or `--simple' switch which causes the output to be
simplified somewhat for easier parsing by other scripts. For instance,
characters are escaped using a very simple mechanism instead of C's
more complicated backslash notation, data doesn't have `{}' or `[]'
characters interspersed for compound and array types, and data is
printed with exactly one element per line. This switch is now used by
an HDF5-to-HTML CGI script being developed for the DMF people.
./tools/h5tools.c
./tools/h5tools.h
The repeat threshold which controls how strings are printed when a
character repeats a bunch of times is now settable at runtime instead
of compile time. The default is to show all characters, like
"abceeeeeeeeeeeeeeeeeeeeeeeeeeeeeefgh"
But if you set it to something like 5 then any sequence of 5 or more
characters is replaced by something shorter, like:
"abc" 'e'x30 "fgh" or
Added an `str_locale' property which describes how to escape special
characters in strings. The default is C-like escapes but an
alternative is ESCAPE_HTML which replaces all non-alphanumeric
characters with a 3-character HTML escape of the form `%XX'
Fixed a bug where empty strings didn't even have the quote characters
printed. Now empty strings show up as `""' instead of absolutely
nothing.
Added a `per_line' property which controls the maximum number of
elements which will appear per line of output. The default is infinity
but in practice the right margin causes line breaks. By setting the
`per_line' value to one and the right margin to a very large value one
can achieve output with exactly one element per line.
