Commit Graph

148 Commits

Author SHA1 Message Date
Allen Byrne
e835063ebf Change CMake min to 3.10 2018-03-09 12:38:48 -06:00
Allen Byrne
ef4aa562dd HDFFV-10392,10393,01385 merge from develop 2018-01-22 11:56:54 -06:00
Allen Byrne
f514861864 HDFFV-8745 merge h5diff attribute fix 2018-01-11 09:13:05 -06:00
lrknox
2c3bde7f74 Add assignment to get value from environment variable realtimeOutput.
Propagate changes to Makefile.ins with bin/reconfigure.
2017-12-04 16:54:09 -06:00
Allen Byrne
fbc86cfb3d HDFFV-10297 merge from develop
Also cleaned up some other non-merged changes
2017-10-11 15:11:39 -05:00
lrknox
7f758f2eea Merge branch '1.8/master' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into hdf5_1_8 2017-08-25 15:10:42 -05:00
M. Scot Breitenfeld
51b97cc02d generated reconfigure files for configure changes 2017-08-04 09:03:29 -05:00
lrknox
9a31b0748f Disable building of libdynlib* dynamically loaded plugin test libraries
on CYGWIN.
Added known problem entry to RELEASE.txt.
Set version for 1.8.19 release.
Barbara updated contents of README.txt file.
2017-06-14 12:26:55 -05:00
lrknox
16e0eb3c52 Moved libdynlib* plugin test libraries to noist_LT_LIBRARIES with added
flag '-rpath /nowhere' to stop them being installed while keeping them
from linking with libhdf5, etc.
Incremented version to 1.8.19-pre1 and ran bin/release to create tar
and zip files for testing.
2017-06-12 17:04:41 -05:00
lrknox
3a43f7af3e Merge branch 'hdf5_1_8' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into hdf5_1_8 2017-05-19 21:32:43 -05:00
Allen Byrne
a466f16851 Tools merge from develop-1.10 2017-05-17 15:53:42 -05:00
lrknox
583952ed15 Change copyright headers to replace url referring to file to be
removed and replace it with new url for COPYING file.
2017-05-16 10:16:12 -05:00
lrknox
0ff30fa67c Move libdynlib* test lib files from lib_LTLIBRARIES to dyn_LTLIBRARIES
and other changes to Makefiles and config/conclude.am to eliminate
link errors with new libdynlib*_la_LDFLAGS which were added to stop
libdynlib* files linking to external libraries.
2017-05-10 13:54:18 -05:00
Allen Byrne
ba2cfde1fd Merge/port changes from develop back to 1.8 for tools and cmake 2017-03-29 16:44:23 -05:00
Allen Byrne
1f4602f73b HDFFV-10120 verify nozlib checks and synchronize scripts with develop 2017-03-01 12:33:32 -06:00
Allen Byrne
78ea0a0c08 HDFFV-9875 Bring changes from develop branch 2017-02-06 15:30:08 -06:00
Allen Byrne
4f3f30e63d Update CMake required to version 3.2.2 2017-01-18 14:42:39 -06:00
lrknox
1974619efb Update shared object file numbers according to changes in v1.8.18 release.
Update autotools and libtool versions.
Run bin/reconfigure.
2016-11-01 13:30:48 -05:00
Allen Byrne
6f21a54989 Add missing EXPORT tag in install command 2016-10-17 10:00:15 -05:00
Allen Byrne
06b2da9165 Add namespace and export utils 2016-10-14 12:35:40 -05:00
Allen Byrne
d6d7e62d0b [svn-r30171] HDFFV-9939: convert cmake copy commands to reduce issue with too long command lines on some platforms.
Also, refactor hl/tools/gif3h5 cmake files.
JAVA-1920: add plugin test with plugin that depends on hdf5
2016-07-12 12:16:00 -05:00
Allen Byrne
7470e8114d [svn-r27532] Merge of CMake dual-binary changes from CMake branch to 1.8
Tested: local linux (CMake branch has been tested on Windows)
2015-08-19 15:35:08 -05:00
Mohamad Chaarawi
db4acaf3ab [svn-r27165] Merge 27133 & 27158 from trunk:
- Add a new attribute function characterstic for format:
   * H5_ATTR_FORMAT(X,Y,Z)  __attribute__((format(X, Y, Z)))
 - Rename UNUSED attribute characterstic to H5_ATTR_UNUSED.
 - Rename NORETURN attribute characterstic to H5_ATTR_NORETURN

tested with h5committest.
2015-06-08 16:30:38 -05:00
Larry Knox
083ef61b05 [svn-r26728] Merge trunk reviwions 26669 and 26670.
Removed from configure.ac VPATH section, LONE_COLON check and checks for redundant addition of /usr/include and /usr/lib to compile flags, with reconfigure.

Tested h5committest
2015-04-04 10:27:14 -05:00
Allen Byrne
ad4154cdc8 [svn-r26700] Generators are only built static
Plugin test for disable state does not print error stack and does not print FAILED
2015-04-01 16:04:06 -05:00
Allen Byrne
025d90f573 [svn-r26697] HDFFV-9131: Remove obsolete/unneeded sections. 2015-04-01 15:27:26 -05:00
Allen Byrne
7ebd4c8311 [svn-r26600] Fix CMake target calls to add new parameter 2015-03-26 08:51:01 -05:00
Jerome Soumagne
2bb934857b [svn-r26582] Merge r26509 from trunk
Run reconfigure after merges from autotools_rework branch
2015-03-25 13:07:02 -05:00
Dana Robinson
85beb272c5 [svn-r26395] Merges r26329 from trunk
Removed the configure option that allows selective disabling of individual
internal filters (fletcher32, shuffle, etc.).

This feature mucked up the code with a lot of #ifdefs, saved very little
space and was not scalable to a general scheme for library size reduction.
We've decided to remove the feature while we investigate a more general
scheme for decreasing the library size.

Fixes: HDFFV-9086

Tested on: h5committest
2015-03-08 23:24:02 -05:00
Allen Byrne
ece0ba0336 [svn-r26371] Update cmake mininum version
Update windows wix cpack process.
2015-03-05 11:48:32 -05:00
Scot Breitenfeld
add51325ef [svn-r26314] Brought autotools related changes from the trunk to the branch, r26188 r26280 2015-02-26 09:21:33 -05:00
Mohamad Chaarawi
90067b76ce [svn-r26304] bring 26303 from trunk:
remove files with .clog2 extension generated by MPE when doing make clean
2015-02-25 13:52:27 -05:00
Mohamad Chaarawi
62ec301df9 [svn-r26224] merge 26180 from trunk:
configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:

- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.
2015-02-18 17:01:17 -05:00
Quincey Koziol
e8c162613b [svn-r25497] Description:
Merge changes that correspond to the 64-bit ID changes (without the actual
switch to 64-bit IDs) to the 1.8 release branch.  (Plus a few minor cleanups
and alignments with the trunk that aren't on the branch)

Tested on:
    Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN
    (h5committested on branch already for a week)
2014-07-30 15:56:40 -05:00
Mohamad Chaarawi
2700d20859 [svn-r25402] Bring 25397/8 from trunk:
- remove configure checks for MPI_File_get_size and Big MPI_File_set_size as they are supported by MPIO implementations today.
- fix bug in t_mpi.c (HDFFV-8856)

tested with h5committest.
2014-07-10 09:36:34 -05:00
Allen Byrne
5278b9737d [svn-r25222] Merge cmake_ext_mod into 1.8 2014-05-27 12:46:30 -05:00
Dana Robinson
c5815755cc [svn-r25111] Changed Subeversion EOL and executable properties. No code changes. 2014-04-25 15:58:01 -05:00
Larry Knox
b018ba48ce [svn-r25106] Removed LT_ADD_LIBHDF5_DEPENDENCY configure conditional to roll back fix for removing rpaths from lib files. The fix also removed dependencies on libhdf5, etc. when the --disable-sharedlib-rpath configure option was invoked.
Added instead configure variable hardcode_into_lib=no.  This removes rpath from lib files on Linux and solaris machines.

Tested with h5committest on jam, koala, ostrich and platypus (cmake), and on emu and kite.
2014-04-25 14:34:54 -05:00
Allen Byrne
ab2d9f1e9c [svn-r24980] HDFFV-8290: Merge automake 1.14.1 changes from trunk
Tested: h5committest
2014-04-07 12:26:44 -05:00
Allen Byrne
d9020f2e35 [svn-r24906] Merge latest CMake changes from trunk.
Tested: local linux
2014-03-26 10:00:35 -05:00
Quincey Koziol
25147d5567 [svn-r24878] Description:
Bring r24864 from trunk to 1.8 branch:

    Remove all traces of MPI-POSIX VFD and GPFS detection/code.

    Remove remaining traces of stream VFD.

    Remove testpar/t_posix_compliant test (it's not actually verifying anything).

    Clean up H5D__mpio_opt_possible() further.

    Moved environment variable that disables MPI collective operations into
    MPI-IO VFD (instead of it being in src/H5S.c).

    A few other small code cleanups.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/parallel & serial
    (daily tested on trunk)
2014-03-24 12:41:18 -05:00
Larry Knox
f4781c29da [svn-r24732] Fix for reconfigure, which fails because LT_ADD_LIBHDF5_DEPENDENCY is used in Makefiles but the declaration in configure.ac is missing.
Copied declaration from trunk.  Tested with h5committest on jam ostrich koala and platypus(cmake).
2014-02-22 13:22:26 -05:00
Allen Byrne
d7e8a93078 [svn-r24654] HDFFV-8640: Remove XLATE_UTILITY
Update tools testfiles
2014-01-28 11:11:22 -05:00
Allen Byrne
08901f283e [svn-r24393] Cleanup testfiles from scripts. Update lists of files to be cleaned. CMake update to clean testfiles.
Tested: local cmake, autotools
2013-11-01 16:26:11 -05:00
Allen Byrne
8194f34ef7 [svn-r24072] Merge trunk cmake changes to 1.8 branch.
Also add default switch blocks to h5import.
Merge h5dump any_path option from trunk.

Tested: local linux
2013-08-26 10:35:15 -05:00
Allen Byrne
5c84b51030 [svn-r24024] JAVA-1714: CMake packaging for macs improved
HDFFV-7989: h5dump any_path and help text grouping
Added cygwin-64 support

Merged from trunk, tested local linux
2013-08-19 11:51:32 -05:00
Vailin Choi
dd327986b9 [svn-r24014] This checkin is a merge of the checkin for h5stat to the trunk (rev #23975-23977) + an additional bug fix--
A) Fix for HDFFV-1238:
   --Add 3 new options to allow users in setting threshold for small groups/datasets/attributes (tools/h5stat/h5stat.c)
   --Generate new test file for testing the new options (tools/h5stat/h5stat_gentest.c)
   --Add tests for the new options (tools/h5stat/testh5stat.sh.in)
   --Update expected output files (tools/h5stat/testfiles/*.ddl)
B) Fix a bug in determining maximum dimension size for 1-D dataset in dataset_stats() (tools/h5stat/h5stat.c)
C) Fix a bug when using opt_arg that is NULL for the new options.
2013-08-16 14:20:34 -05:00
Allen Byrne
e41f1a44b8 [svn-r23771] HDFFV-8434,-8437,-8445,-8447,-8461: Merge changes from Trunk.
Tested: local linux
2013-06-14 09:24:27 -05:00
Quincey Koziol
afc68537cd [svn-r23696] Description:
Bring r23695 from trunk to 1.8 branch:

Clean up warnings in H5Tconv.c (down to _only_ 9000 lines of output now!)

Merge changes from Coverity branch back to trunk:

r20684:
Fix for coverity bug #1721 which was due to the fix for coverity bug #943.

r20685:
Use HDstrncpy. --gh

r20761:
Purpose: Fix valgrind issues

Description:
Free image_data and data as appropriate in test_image.

r20762:
Purpose: Fix coverity issue 600

Description:
Add check for return value of H5O_close in H5Ocopy.  Also cleaned up various
warnings.

r20763:
Purpose: Fix valgrind issues with h5stat

Description:
Modified h5stat to free "iter" before exit, and free "hand" before exit if
parse_command_line exits directly.

r20764:
fixed coverity issues:
69, 327, 614, 684, 685, 696, 697, 1681, 967, 826, 660, 80

r20765:
Fixed coverity bug 668

Pulled x * y * z multiply out of malloc operand into a separate n_elements variable to quiet integer overflow warning.

No actual integer overflow tests are performed since it's just a test program but I did add a check that n_elements is >= 1.

I also changed an error condition from doing its own close and returning -1 to "goto out;" like the rest of the program.

r20766:
Fixed coverity bug 667

Pulled x * y * z multiply out of malloc operand into a separate n_elements variable to quiet integer overflow warning.

No actual integer overflow tests are performed since it's just a test program.


Tested on:
    Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN
    (h5committest upcoming)
2013-05-11 11:42:54 -05:00
HDF Tester
ab5a49b8bd [svn-r23324] Snapshot version 1.8 release 11 (snap11) 2013-03-03 21:47:16 -05:00