Commit Graph

334 Commits

Author SHA1 Message Date
David Young
7f0d3f431e Reduce diffs with develop. 2020-05-20 09:37:22 -05:00
David Young
eae6bb5efd Reduce diffs with develop. 2020-05-20 09:37:22 -05:00
Dana Robinson
ef51913e29 Removed HDgets macros since gets was deprecated in C99 and removed
in C11 (gets() is not used in our repo).
2020-05-20 09:37:20 -05:00
Dana Robinson
7fa219e204 Protected H5Oset_comment() in h5dump test generator.
(Assumes environment variable overrides default VOL connector)
2020-05-20 09:37:20 -05:00
Dana Robinson
aa30bd054d Fixed pio_perf const pointers. 2020-05-20 09:37:20 -05:00
Dana Robinson
6eebd57742 Further updates to the tools warnings fixes from code review. 2020-05-20 09:37:20 -05:00
Dana Robinson
3efed9c111 Fixes for warnings in the tools code. 2020-05-20 09:37:20 -05:00
Dana Robinson
2f5d6bac34 Fixed h5diff command-line parameters to use 1 and 2 instead of src
and dst.
2020-05-20 09:37:19 -05:00
Dana Robinson
957e4eba9c Added VOL command-line options to (p)h5diff, h5ls, h5dump, and h5mkgrp. 2020-05-20 09:37:19 -05:00
Quincey Koziol
d35daa45e9 Trim trailing whitespace 2020-05-20 09:37:19 -05:00
Dana Robinson
755971029c Changed identifiers and command-line options from "id" to "value" in tools
code to be in agreement with H5VL API terminology.
2020-05-20 09:34:20 -05:00
Dana Robinson
da9752598f Updated test ddl files so CMake passes after h5dump failures. 2020-05-20 09:31:58 -05:00
Jordan Henderson
8d9323aab7 Skip testing of passthrough VOL connector in a Family File tools test 2020-05-20 09:31:57 -05:00
Jordan Henderson
ba79f94586 Fix latent bug in h5repack options file reading
Add 'enable-error-stack' option to h5format_convert
2020-05-20 09:31:57 -05:00
Jordan Henderson
254388494a Update Tools library to be better compatible with VOL connectors
Modify h5repack to integrate with VOL connectors

Update tools library to accomodate VOL connectors

Update logic in h5tools_fopen for VOL connectors

Add command-line options to h5repack for specifying in/out VOL
connectors

Implement h5tools_set_vol_fapl

Fix library shutdown issue

Integrate ROS3 and HDFS VFDs into new h5tools_get_fapl() scheme

Avoid H5Ocopy in h5repack when using different VOL connectors

Update h5tools_test_utils.c for ROS3 and HDFS integration
2020-05-20 09:31:56 -05:00
Allen Byrne
0e45724b69 Fix standalone link 2020-05-20 09:31:55 -05:00
Allen Byrne
0aadc45530 HDFFV-11036 add file compare test process 2020-05-20 09:31:55 -05:00
Allen Byrne
60a4987f97 TRILAB-142 Change minimum CMake version to 3.12 2020-05-20 09:31:55 -05:00
David Young
28103327a5 H5_HAVE_PARALLEL, _DEBUG_API, etc. Add attributes to some variables and
parameters that are unused under some configurations.
2020-05-20 09:31:55 -05:00
David Young
13bb3afdc6 Reduce differences between my -Werror branch and develop:
Rename index -> idx, fileno -> fnumber, fileno -> fno to avoid GCC
shadowed declaration warnings about index(3).

Convert #pragma GCC diagnostic push/pop/ignored to the HDF5 library's
H5_GCC_DIAG_OFF()/H5_GCC_DIAG_ON() macros.
2020-05-20 09:31:54 -05:00
David Young
2360f6e644 testpar/t_2Gio.c: Fix a typo that I think was introduced by a
previous warnings PR.  An array element was assigned to
        itself---shape[2]Â =Â shape[2];---instead of being assigned to
        chunk[2].

fortran/src/H5Pf.c: move conditional compilation controlled by
        H5_NO_DEPRECATED_SYMBOLS outside of a function for readability.

fortran/src/H5match_types.c: put a variable's declaration under the same
        conditional compilation (H5_FORTRAN_HAVE_C_LONG_DOUBLE) as its
        use.

For now, skip compilation of some unused debug dump routines in the JNI.
While I'm in the JNI, delete a set-but-unused variable.

src/H5Z.c: condition a variable declaration on H5_NO_DEPRECATED_SYMBOLS
        so that it's not declared but unused or vice versa.

test/cache_common.h: add an #include in to get some symbols we need to
        avoid implicit declaration warnings.

test/dsets.c: use a more conventional conditional-compilation syntax.

test/dt_arith.c, test/fillval.c: initialize a bunch of uninitialized
        variables before use.

test/vfd.c: pass the expected type of `void **` to posix_memalign(3)
        instead of `int **`.

testpar/t_bigio.c: explicitly compare with 0 instead of using ! when
        "equal to 0?" is the question not "is false?"  Repair some
        indentation while I'm here.

testpar/testpar.h: repair misaligned line-continuation backslashes in a
        macro that probably should be a function so that we don't have
        to fiddle with the line continuation to begin with.

tools/src/h5repack/h5repack_main.c: fix some compiler fussing about
        enums.

tools/test/perform/pio_engine.c: the compiler fusses if you cast a
        function call returning double directly to off_t.  It's ok if
        you cast a variable that's a double to off_t, however.  Write
        and use a new function, sqrto(), to avoid the cast warnings.
2020-05-20 09:31:53 -05:00
Allen Byrne
b44b3d136d HDFFV-11011 correct issues with target file extension 2020-05-20 09:31:53 -05:00
Allen Byrne
09ba68d026 Correctly manage warnings for new tests 2020-05-20 09:31:53 -05:00
kmu
d59460e632 change condition 2020-05-20 09:31:53 -05:00
kmu
51f9a51c25 fix Wredundant-decls, Wswitch-default, Wdeclaration-after-statement, Wsign-compare, Wmisleading-indentation, Wshadow 2020-05-20 09:31:53 -05:00
Allen Byrne
c491fd1cfc Remove cmake macros from valgrind tests 2020-05-20 09:31:53 -05:00
Dana Robinson
3290803120 Revert "Revert "Moved -Wunsuffixed-float-constants to the developer warnings.""
This reverts commit 6486e06545.
2020-05-20 09:31:52 -05:00
Dana Robinson
36647e79b9 Revert "Moved -Wunsuffixed-float-constants to the developer warnings."
This reverts commit 12bc75c617.
2020-05-20 09:31:52 -05:00
Dana Robinson
40c5e67e41 Moved -Wunsuffixed-float-constants to the developer warnings. 2020-05-20 09:31:52 -05:00
kmu
30e61cf090 squash cast warning fix 2020-05-20 09:31:52 -05:00
kmu
f0ee8b2883 not use hdf5 private header 2020-05-20 09:31:51 -05:00
kmu
1c226ac077 fix float type cmp warning 2020-05-20 09:31:51 -05:00
kmu
742aa75cd0 fix missing prototype warning 2020-05-20 09:31:51 -05:00
kmu
27c618b91d fix unused related warnings 2020-05-20 09:31:51 -05:00
kmu
a6e8f34b7b remove unsed var,function,macro, etc 2020-05-20 09:31:51 -05:00
kmu
0c9d2de9e2 fix uninitizlized warning 2020-05-20 09:31:50 -05:00
Dana Robinson
0585e6fb34 Fixed stack and frame size warnings. Not complete, but fixes most of
the easier cases.
2020-05-20 09:31:50 -05:00
Allen Byrne
e54dcb1609 Correct standalone function attributes 2020-05-20 09:31:50 -05:00
Dana Robinson
3e6a192e9c Squashed commit of the token_refactoring branch: 2020-05-20 09:31:50 -05:00
Allen Byrne
6b106b2cab HDFFV-11001 need to qualify all by parallel or serial types 2020-05-20 09:20:26 -05:00
Allen Byrne
6682c717e2 HDFFV-11001 Add fine control over testing 2020-05-20 09:20:26 -05:00
Allen Byrne
16245b0440 Update tools hid_t declarations with H5I_INVALID_HID 2020-05-20 09:20:26 -05:00
Allen Byrne
738b025b3e io_timer.c uses a parallel lib function 2020-05-20 09:20:25 -05:00
Allen Byrne
d915fa7f07 Fix standalone compile issues 2020-05-20 09:20:25 -05:00
kmu
156bc312ed fix test assert fail error 2020-05-20 09:20:25 -05:00
kmu
95e509db46 fix and address comments 2020-05-20 09:20:25 -05:00
kmu
271bce5b10 remove unnecessary check macro 2020-05-20 09:20:25 -05:00
kmu
1d46e82317 fix intel compile warnings 2020-05-20 09:20:25 -05:00
kmu
fb8f955a73 Revert "fix warnings from Intel compiler"
This reverts commit 8b9338ab57.
2020-05-20 09:20:24 -05:00
kmu
9d8fb46a2c Revert "fix issues from previous PR comments"
This reverts commit d242a900f4.
2020-05-20 09:20:24 -05:00