Commit Graph

64 Commits

Author SHA1 Message Date
Quincey Koziol
d35daa45e9 Trim trailing whitespace 2020-05-20 09:37:19 -05:00
Dana Robinson
0585e6fb34 Fixed stack and frame size warnings. Not complete, but fixes most of
the easier cases.
2020-05-20 09:31:50 -05:00
Dana Robinson
3e6a192e9c Squashed commit of the token_refactoring branch: 2020-05-20 09:31:50 -05:00
Dana Robinson
e4f9ad3dbb Yanked -Wc++-compat from the flags used to build the C library in both
the Autotools and CMake.
2020-05-20 09:20:18 -05:00
David Young
c8f533cfc3 Merge all of my changes from merge-back-to-feature-vfd_swmr-attempt-1,
including the merge of `hdffv/hdf5/develop`, back to the branch that Vailin and
I share.

Now I need to put this branch on a fork with a less confusing name than
vchoi_fork!
2019-12-09 10:30:58 -06:00
Hyo-Kyung Lee
863148d1fe fixed typo. 2018-07-10 18:13:44 -05:00
hdftest
b193bc11c9 Revert "Merge pull request #1116 in HDFFV/hdf5 from ~HDFTEST/hdf5_hft:hdf5_1_10 to develop"
This reverts commit e9f476dad4, reversing
changes made to 2ff00b1b93.
2018-06-24 18:04:23 -05:00
M. Scot Breitenfeld
f484649347 Merge branch 'develop' into hdf5_1_10.sync 2018-06-04 14:41:12 -05:00
Vailin Choi
4df595946c Fix for HDFFV-10469: set to latest format for virtual layout encoding. 2018-05-17 11:51:34 -05:00
M. Scot Breitenfeld
278fdfcbdb temporary fix for HDFFV-10469 2018-05-09 16:26:09 -05:00
M. Scot Breitenfeld
b69bd0771e Merge branch 'develop' into hdf5_1_10.sync 2018-05-08 17:17:45 -05:00
Vailin Choi
e6bc326ec0 Fix for HDFFV-10180 Performance issues with H5Oget_info. 2018-04-24 15:10:13 -05:00
Quincey Koziol
f38864920d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into merge_func_enter_vol
Plus initial steps toward merging API context push into FUNC_ENTER_API* macros
2018-03-18 18:36:49 -05:00
M. Scot Breitenfeld
8712f3e231 synced with develop 2018-01-05 09:57:48 -06:00
Allen Byrne
bd34c9e455 HDFFV-9724 Corrected files and verified tests 2017-12-28 16:49:50 -06:00
lrknox
86d8a4c267 Revert "Merge pull request #826 in HDFFV/hdf5 from ~BYRN/hdf5_adb:develop to develop"
This reverts commit b1223dd653, reversing
changes made to b25f123f5f.
2017-12-22 12:28:24 -06:00
Allen Byrne
1efe978ae0 Fix library interface commands, add missing JNI 2017-12-21 13:48:49 -06:00
Allen Byrne
94b8a212bf Cleanup comments and if() in TRY blocks 2017-12-20 10:57:41 -06:00
Allen Byrne
8444f018ca HDFFV-9724 Add ENV VAR to vds test 2017-12-19 14:58:17 -06:00
Allen Byrne
95e96246a6 HDFFV-9724 Initial changes and test 2017-12-11 14:44:30 -06:00
Vailin Choi
3d84163ad3 Fix for HDFFV-9947 H5Sencode
Modifications to fix H5Sencode bug when num points selected is > 2^32.
2017-11-28 11:11:27 -06:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
lrknox
25ec07450a Change copyright headers to replace url referring to file to be removed
and replace it with new url for COPYING file.

Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
2017-04-14 11:54:16 -05:00
Allen Byrne
71fa3dc480 Fix alignment 2017-03-08 11:51:17 -06:00
Allen Byrne
12b87f0f84 Fix vds tests
java wrong call
vds test - missing checks and if content
2017-03-07 10:06:38 -06:00
Quincey Koziol
bb19817c9f [svn-r30189] Description:
Clean up more warnings: drop the warning count from ~1310 down to ~940,
with only 31 types of warnings in 148 files (down from 38 types in 167 files).

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-07-17 19:18:42 -05:00
Allen Byrne
2f1b517021 [svn-r29884] VDS correction for get_space_status, with test change.
Add new files for repack tests.
Add repack tests for VDS files.
2016-05-04 11:38:08 -05:00
Dana Robinson
0dd0ffd5c1 [svn-r29421] Fix for HDFFV-9516.
Corrects a problem where H5Dget_access_plist() returns a dapl that
does not contain all dapl fields.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial
2016-03-15 12:43:34 -05:00
Dana Robinson
7822924da9 [svn-r28573] Merge of r28109 from revise_chunks. Minor change to test/vds.c.
Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial only
2015-12-10 22:18:03 -05:00
Quincey Koziol
0695d6366a [svn-r27835] Description:
Sync w/trunk.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
2015-09-20 21:18:45 -05:00
Neil Fortner
c839ed3383 [svn-r27646] Add version number to VDS global heap object encoding.
Fix handling of layout version number.
Other minor fixes/cleanup.
NOTE: This commit changes the file format for VDS, all files must be
re-generated.

Tested: ummon
2015-09-01 08:03:33 -05:00
Neil Fortner
32bf83f1cf [svn-r27546] Add tests for H5O__dset_bh_info (H5Oget_info) and unlimited selections in a
region reference.

Tested: ummon
2015-08-21 14:57:29 -05:00
Neil Fortner
1821b64d49 [svn-r27543] Add tests to cover remaining code coverage assertions in H5Shyper.c.
Add more tests for unlimited selections.
Fix bug related to empty unlimited source dataset.

Tested: ummon
2015-08-20 17:18:52 -05:00
Neil Fortner
e3bea91686 [svn-r27538] Add tests to cover remaining code coverage assertions in src directory except
for those in H5Doh.c and H5Shyper.c.

Tested: ummon
2015-08-20 11:38:05 -05:00
Neil Fortner
6909d2033f [svn-r27527] Add tests to hit code coverage assertions in H5Olayout.c.
Fix issue in VDS delete routine.

Tested: ummon
2015-08-19 11:21:27 -05:00
Neil Fortner
69e2f53edb [svn-r27520] Add new test for all 3 selection types in the same VDS.
Minor cleanup in the tests.

Tested: ummon
2015-08-18 15:45:46 -05:00
Neil Fortner
cefda2ef0c [svn-r27505] Add support for H5Dset_extent for VDS.
Add tests for this.
Other bug fixes/cleanup

Tested: Kubuntu 64 (home computer)
2015-08-13 21:55:15 -05:00
Neil Fortner
1ba3706640 [svn-r27498] Add support for I/O after reopening a VDS with unlimited and/or printf mappings
without calling H5Dget_space first.
Add tests for this.
Other minor fixes/cleanup.

Tested: ummon
2015-08-12 13:19:48 -05:00
Neil Fortner
0c4ec00cba [svn-r27481] Add support for offset selections passed to H5Pset_virtual.
Add test for this.

Tested: ummon
2015-08-07 15:06:56 -05:00
Neil Fortner
98f947ceae [svn-r27479] Add checking for invalid inputs to H5Dset_virtual: point selections, incorrect
numbers of elements selected, incorrect "slice" through limited dimensions,
incorrect number of printf substitutions.
Patch source selection space extent with bounds of selection if extent is
unknown before returning via H5Pget_virtual_srcspace.
Write updated VDS dataspace to file when it changes due to unlimited selections.
Other minor fixes/cleanup.

Tested: ummon
2015-08-07 11:15:39 -05:00
Neil Fortner
49076d6d22 [svn-r27425] Implement support for H5Pequal with VDS properties.
Testing for H5Pequal with VDS.

Tested: ummon
2015-07-22 16:41:18 -05:00
Neil Fortner
6bb109bf6d [svn-r27424] Implement support for h5debug for VDS.
Implement support for H5Pencode/decode with VDS properties.
Testing for H5Pencode/decode with VDS.
Relax assertion check for number of elements written to buffer as we do not
check for overlaps in mappings.
Other minor fixes/cleanup.

Tested: ummon
2015-07-22 13:36:30 -05:00
Neil Fortner
a8fc7eeaec [svn-r27420] Fixed VDS test to handle the family driver correctly.
Tested: ummon
2015-07-21 12:14:26 -05:00
Neil Fortner
3c4dd5fa53 [svn-r27323] Implement support for H5Dflush for VDS.
Implement support for H5Ocopy on VDS.
Testing for H5Ocopy on VDS.
Fix check-vfd failure.
Other minor fixes/cleanup.
Note there is a preexisting failure in h5repack testing.

Tested: ummon
2015-07-02 12:04:19 -05:00
Neil Fortner
91eb17db8e [svn-r27215] Fix issue where % characters could not be used in non-printf mappings.
Other minor fixes/cleanup.

Tested: ummon
2015-06-16 12:27:20 -05:00
Dana Robinson
4f231ddc9b [svn-r27214] Fixed a bug on Windows where dcpls were set to be chunked and not virtual. This was due to a simple copy-paste issue in the initializer that is used when C99 initializers are not available.
Also fixed a dims array size error in the vds test.

Tested on: 64-bit Win7 with VS2013
2015-06-16 12:02:35 -05:00
Neil Fortner
4117cfe2b9 [svn-r27197] Improve performance of "printf" VDS with selections in the file space - the
library no longer iterates over all source datasets in the printf mapping, it
now only looks at the ones that could be involved in I/O (the ones whose bounds
overlap with the selection in the unlimited dimension).

Tested: ummon
2015-06-12 17:04:35 -05:00
Allen Byrne
78e128c544 [svn-r27195] Add h5dump cmake tests and files.
Add tools gen cmake files
move testfiles for pbits to subdir as well as vds

Tested: local linux
2015-06-12 16:29:20 -05:00
Neil Fortner
9786fe2f61 [svn-r27192] Improve support for printf selections (support partial blocks with
H5_VDS_FIRST_MISSING)
Add test for this
Rework VDS code to not depend on unlimited selections having a "clipped" state
in preparation for removing the clipped state from unlimited selections.
Other bug fixes/cleanup

Tested: Kubuntu 64 (home computer)
2015-06-11 23:26:53 -05:00
Neil Fortner
c27904bc5f [svn-r27153] Implement fill value support for VDS.
Add testing for this.
Fix bug in printf string parsing.
Add test for this.
Other minor fixes/cleanup.

Tested: ummon
2015-06-05 16:55:24 -05:00