Commit Graph

26 Commits

Author SHA1 Message Date
Larry Knox
f32690b53c [svn-r24997] Added compiler versions for mpich to settings file and configure summary.
For make installcheck, compile and run installed examples using the installed scripts.  They were being compiled but not run.
Add Fortran2003 examples to the run-ex-fortran script when fortran2003 is enabled.
Set flag to -O3 in production mode for Intel compilers other than those with specified other settings.
Gentoo patches:
    Remove unnecessary setting of LD_LIBRARY_PATH from configure.
    Prevent potential array subscript out of bounds error in perform/pio_engine.c and sio_engine.c.

Tested with h5committest on jam, koala, ostrich and platypus, on emu and kite, and parallel tests on jam, koala and platypus with mpich built with gnu 4.8.2 and with intel compilers.
2014-04-08 23:55:49 -05:00
Quincey Koziol
2e4302818a [svn-r24864] Description:
Remove all traces of MPI-POSIX VFD and GPFS detection/code.

    Remove remaining traces of stream VFD.

    Remove testpar/t_posix_compliant test (it's not actually verifying anything).

    Clean up H5D__mpio_opt_possible() further.

    Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).

    A few other small code cleanups.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/parallel & serial
2014-03-21 18:02:24 -05:00
Quincey Koziol
288c7760a4 [svn-r24803] Description:
Rename GCC_DIAG_OFF/ON macros to H5_GCC_DIAG_OFF/ON and move from
src/H5private.h to src/H5public.h.  Wrap typedef of hsize_t and hssize_t
in DIAG_OFF(long-long) macros.

    Clean up a bunch of "macro '-' is unused" warnings.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/gcc 4.8.2, C++, FORTRAN, parallel
    (too minor to require h5committest)
2014-03-15 22:13:52 -05:00
Quincey Koziol
1e36b5a348 [svn-r24726] Description:
Revert some earlier usage of strncpy, which was incorrect.

    Bring Coverity changes from branch back to trunk:

r20821:
    Use HDstrncpy. --gh
    (Fixed already, with strdup)

r20822:
    (Not merged, incorrect use of HDstrncpy())

r20823:
    (Not merged, incorrect use of HDstrncpy())

r20824:
    Maintenance: Bug fix: addressed CID 666.
    Value stored at *expression_len should be used in the call to
        HD5packFstring to avoid overflow (and unnecessary arithmetic
        calculation and casting) 

r20825:
    Issue 642: Added check for error and handler with print to stderr and exit.

r20826:
    Undo revision 20818, as that issue has already been fixed in the 1.8 branch
        and trunk (but not coverity branch)

r20827:
    (Not merged, incorrect use of HDstrncpy())
    
r20828:
    Use HDstrncpy. --gh
    (Corrected use of strncpy())

r20829:
    Check return of H5Lget_val(print_udata->fid, path, targbuf,
        linfo->u.val_size + 1, H5P_DEFAULT) and if error set trgbuf[0] to 0.
        Check if  H5Lunpack_elink_val(targbuf, linfo->u.val_size, NULL,
        &filename, &objname) was successful and allow print. Otherwise filename
        and objname are not created. (init those to NULL)

r20830:
    resolved coverity issues 939, 940, 941, 944, and 947.

    all were complaints about use of sprintf, and in all cases, the
    buffers used were large enough for all eventualities.

    Resolved issue by replacing calls to sprintf with calls
    to snprintf.

r20831:
    Maintenance: Addressed CID 852
    Replaced sprintf with snprintf

r20832:
    Purpose: Fix valgrind issues with hl/examples/ex_image2

    Description:
    Modified hl/examples/ex_image2 to free global "gbuf" before exit.

Tested on:
    Mac OSX/64 10.9.1 (amaon) w/C++, FORTRAN & Threadsafety
    (too minor to require h5committest)
2014-02-20 16:29:26 -05:00
Quincey Koziol
308c378ccd [svn-r24020] Description:
Clean up compiler warnings

Tested on:
    Mac OSX/64 10.8.4 (amazon) w/C++ & FORTRAN
    (too minor to require h5committest)
2013-08-17 15:05:27 -05:00
Peter Cao
ef73979a41 [svn-r23986] merge warning fixes from Jonathan and Peter 2013-08-09 16:34:58 -05:00
Jonathan Kim
dad8a4ddef [svn-r23863] Remove compile warnings due to missing switch defaults 2013-07-03 17:33:25 -05:00
Mohamad Chaarawi
dfcb3cebf1 [svn-r23862] Change printfs in perform output and h5dump to prevent overflow.
This fixes: https://jira.hdfgroup.uiuc.edu/browse/HDFFV-8450

Tested on Jam.
2013-07-03 11:12:32 -05:00
Mohamad Chaarawi
1e38ef6718 [svn-r23810] revert printf format changes to do a better solution. 2013-06-24 13:16:58 -05:00
Mohamad Chaarawi
148fc61872 [svn-r23801] Change printfs in perform output for long long to use %lld instead of %Hd. The later is for shorts.
This fixes: https://jira.hdfgroup.uiuc.edu/browse/HDFFV-8450

Tested on Jam.
2013-06-20 17:21:42 -05:00
Allen Byrne
df6c92e506 [svn-r22004] Reduced warnings and fixed conflicts resulting from including h5tools.h
Tested: local linux
2012-02-28 13:26:34 -05:00
Quincey Koziol
c087ecdbde [svn-r20048] Description:
Bring Coverity changes back to trunk:

r19733:
Fix memory leak in h5perf_serial.  Global buffer "buffer2" was allocated at the
beginning of do_sio() but never freed.  Added call to free() at end of do_sio().

r19734:
Fix memory leak in iopipe.  Buffer "the_data" was allocated at the beginning of
main() but never freed.  Added call to free() at end of main().


Tested on:
    Coverity branch in daily tests & Mac
2011-02-04 21:41:22 -05:00
Albert Cheng
f747b55895 [svn-r17716] Cosmetic change to use exit(EXIT_FAILURE) instead of exit(1).
Tested: jam-pp.
2009-10-21 13:55:45 -05:00
Quincey Koziol
e99906f517 [svn-r17268] Description:
Bring r17266 from 1.8 branch to trunk:

    Clean up various compiler warnings from IRIX64 build

Tested on:
    Mac OS X/32 (amazon) debug & production
    (yes, I know it's not an IRIX64 system :-)
    Too minor to require h5committest
2009-07-29 20:59:24 -05:00
Allen Byrne
d2ef2af9b2 [svn-r16969] Updated perf_serial test to work on windows.
Tested:
Windows and h5committest
2009-05-21 10:40:03 -05:00
Quincey Koziol
b4ff3e6e79 [svn-r16560] Description:
Remove another call to H5E_clear_stack() from within the library.

    Clean up lots of compiler warnings.

Tested on:
    Mac OS X/32 10.5.6 (amazon)
    (followup on other platforms forthcoming)
2009-03-10 14:00:39 -05:00
Allen Byrne
5d69e87ff0 [svn-r16489] Fixed bug #1459 by eliminating the macro long_long and replacing all instances with long long.
Tested:
   h5comittest
   fedora 10 x64
   Vista 32, VS2005, IVF101
   XP32, Cygwin
2009-02-18 15:02:05 -05:00
Quincey Koziol
bdd7d59902 [svn-r15628] Description:
Remove trailing whitespace from C/C++ source files, with the following
script:

    foreach f (*.[ch] *.cpp)
        sed 's/[[:blank:]]*$//' $f > sed.out && mv sed.out $f
    end

Tested on:
    Mac OS X/32 10.5.5 (amazon)
    No need for h5committest, just whitespace changes...
2008-09-16 10:52:51 -05:00
Christian Chilan
489e339019 [svn-r15563] Added support for serial prefix HDF5_PREFIX.
Tested on kagiso, smirom, and linew.
2008-08-29 16:33:14 -05:00
Christian Chilan
a97fa671eb [svn-r15179] Change copyright notice to THG only. 2008-06-09 12:10:39 -05:00
Christian Chilan
64b2c94612 [svn-r15090] Revise copyright notice. 2008-05-29 11:17:56 -05:00
Scot Breitenfeld
aec106e324 [svn-r14903] Undoing change committed in r14902. 2008-04-30 14:51:13 -05:00
Scot Breitenfeld
5773fd34bc [svn-r14902] Merged fortran_1_8 branch changes r14505:14901 into the trunk. New fortran wrappers added. 2008-04-30 14:23:26 -05:00
Christian Chilan
438095b24c [svn-r14831] Revise file of the serial benchmarking tool.
Tested on kagiso, smirom, linew, and tg-login.
2008-04-12 18:08:08 -05:00
Christian Chilan
512f4ff28f [svn-r14829] Revised files of the serial benchmarking tool.
Tested on kagiso, smirom, and linew.
2008-04-11 16:25:30 -05:00
Christian Chilan
66bb19b12f [svn-r14826] Files for the serial benchmarking tool, h5perf_serial.
Tested on kagiso, smirom, and linew.
2008-04-10 17:32:53 -05:00