Commit Graph

36 Commits

Author SHA1 Message Date
jhendersonHDF
93ac9b0aeb New references for Dimension Scale APIs (#1139)
* Enable usage of new-style references with dimension scale APIs

* Add API to check if an object ID represents a native connector object

* Modified code to use new function H5DSwith_new_ref to determine if new references should be used with
Dimension Scales. The new function return TRUE if non-native connector is used or if H5_DIMENSION_SCALES_WITH_NEW_REF
varible is define at configure time (--enable-dimension-scales-with-new-ref).

Tested on jelly.

ToDo: generate testing file on BE system and enable the test; add flag to CMake; test netCDF-4 with the new references.

* Adding new test files generated on BE system (hedgehog) created by 32 and 64-bit library.

test_ds chokes on test_ds_le_new_ref.h5  on BE system; test passes for test_ds_be_new_ref-32bit.h5
for the 32-bit library and fails for the 64-bit library, and vice versa. I am checking the files for further
investigation; but current implementation of the new references is not portable between LE and BE systems,
and 32 and 64-bit systems.

* Minor fixes for testing issues

* Update test_ds.c

Enabled broken test; tests pass now.

* Update RELEASE.txt

Documented new option to use new references with the HDF5 dimension scales APIs (H5DS*).

* Update MANIFEST for new 32-bit new-style references test file for H5DS APIs

* Update 'dimension scales w/ new-style refs' feature based on review

Co-authored-by: Elena <epourmal@hdfgroup.org>
2021-11-05 07:33:02 -05:00
Allen Byrne
c0f2bc87ac HDFFV-11266 - add option to build HL tools (#1018)
* HDFFV-11266 - add option to build HL tools

* Correct if syntax

* Correct name of conditional
2021-09-16 12:15:25 -05:00
Dana Robinson
bc1bed2c55 Squash merge of file locking fixes 2020-08-03 09:11:27 -07:00
Jacob Smith
075e74e9b2 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into feature/vfd_splitter_mirror_a 2020-04-07 10:29:00 -05:00
Allen Byrne
b4dcee96ce Minor updates and fix settings for fortran flags 2020-04-06 12:17:43 -05:00
Allen Byrne
0da53027d9 TRILAB-192 add comparable clang flags 2020-03-27 17:10:53 -05:00
Jacob Smith
b65405439d Add Splitter VFD to library.
* "Simultaneous and equivalent" Read-Write and Write-Only channels for
  file I/O.
* Only supports drivers with the H5FD_FEAT_DEFAULT_VFD_COMPATIBLE flag for
  now, preventing issues with multi-file drivers.

Add Mirror VFD to library.

* Write-only operations over a network.
* Uses TCP/IP sockets.
* Server and auxiliary server-shutdown programs provided in a new directory,
  `utils/mirror_vfd`.
* Automated testing via loopback ("remote" of localhost).
2020-03-13 17:13:17 -05:00
Allen Byrne
b477f9bcc7 HDFFV-10901 add missing config options 2019-09-13 11:34:00 -05:00
Larry Knox
8008294578 Squashed commit of the following:
Merge changes from update_merged_S3_HDFS branch into develop.

commit d5034315aea88629929ac0c9c59ebfafd5f21a31
Merge: 9c48823 d3fdcd8
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Thu Jul 25 08:24:53 2019 -0500

    Merge branch 'develop' into update_merged_S3_HDFS
2019-07-25 11:47:12 -05:00
Dhvanil Popat
5e86326e0a Fixed Build HDF Tests name in CMake's libhdf5 settings 2019-07-03 14:21:45 -05:00
Dhvanil Popat
18f65dcee9 Fixed libhdf5 settings file for both autotools & CMake 2019-06-25 07:32:32 +00:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
2019-06-18 07:46:25 -05:00
Dana Robinson
18e6ec82d0 Squash merge of MDC logging changes. 2018-12-20 20:41:42 -08:00
Jordan Henderson
9aa2eaeb9e Add Autotools and CMake checks for big I/O MPI-3 functions 2018-07-31 13:42:19 -05:00
Jordan Henderson
5e138dc1e9 Add hdf5settings section for parallel compression status in CMake builds 2018-07-31 10:45:43 -05:00
Allen Byrne
468fbc36f1 Fix windows compile errors abstract out common settings 2018-01-29 10:27:32 -06:00
Allen Byrne
a87cf25f2d HDFFV-10385 Correct name of var 2018-01-22 07:59:12 -06:00
Allen Byrne
be42e04791 HDFFV-10385 refactor CMAKE_BUILD_TYPE usage 2018-01-09 09:56:28 -06:00
Allen Byrne
63249be0e1 [svn-r29226] HDFFV-9552: merge in java code. 2016-02-28 21:43:00 -05:00
Quincey Koziol
f017eb6fc0 [svn-r28777] Description:
Add --enable-memory-alloc-sanity-check option to configure, to track and
sanity check memory allocations within the library.  This is orthogonal to the
--enable-using-memchecker option and can be used with/without it.

Tested on:
    MacOSX/64 10.11.2 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-01-03 17:06:52 -05:00
Scot Breitenfeld
caf0e7692a [svn-r27493] Trying again to merge the F2003_v1.10 branch to the trunk.
Tested: h5committest --PASSED--
2015-08-11 09:35:30 -05:00
Scot Breitenfeld
3b4696ccd1 [svn-r27489] reverted merge of branch 2015-08-10 20:22:33 -05:00
Allen Byrne
9e2434625d [svn-r27469] Merge from trunk with dual-binary CMake code.
Tested: local linux with CMake
2015-08-05 16:01:07 -05:00
Scot Breitenfeld
b1cf507c6d [svn-r27116] svn merge -r26937:27115 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-05-27 17:12:43 -05:00
Allen Byrne
4fc9a3885d [svn-r26944] Match src folder version 2015-04-28 12:53:17 -05:00
Scot Breitenfeld
fd6ce02c92 [svn-r26877] removed references to F2003 2015-04-21 16:06:52 -05:00
Mohamad Chaarawi
74fbb9e327 [svn-r26180] merge configure fixes for HDFFV-9068,9069,9096,9097,9135 from autotools_rework branch:
- Remove Infering parallel compilers (C and Fortran) from configure.ac
- Remove restriction to build shared with parallel
- Cleanup parallel sections in configure.ac
- remove large file support checks
- MPE fixes.

tested with h5committest.
2015-02-16 11:17:03 -05:00
Allen Byrne
94ede7a8ce [svn-r25043] Correct CPPFLAGS value.
Correct test DEPENDS format.
2014-04-14 10:50:13 -05:00
Quincey Koziol
2e4302818a [svn-r24864] Description:
Remove all traces of MPI-POSIX VFD and GPFS detection/code.

    Remove remaining traces of stream VFD.

    Remove testpar/t_posix_compliant test (it's not actually verifying anything).

    Clean up H5D__mpio_opt_possible() further.

    Moved environment variable that disables MPI collective operations into
MPI-IO VFD (instead of it being in src/H5S.c).

    A few other small code cleanups.

Tested on:
    Mac OSX/64 10.9.2 (amazon) w/parallel & serial
2014-03-21 18:02:24 -05:00
Allen Byrne
82f62cd012 [svn-r24703] Add Binary README.txt file generation
Tested: local linux cmake
2014-02-13 09:00:00 -05:00
Allen Byrne
d4d9cbd52d [svn-r22614] Revert heading of summary. 2012-07-30 14:15:31 -05:00
Allen Byrne
dd27fe612c [svn-r22602] 2012-07-25 17:17:48 -05:00
Allen Byrne
641d10289d [svn-r21425] Add 2003 fortran to settings text 2011-09-27 10:52:56 -05:00
Allen Byrne
215c872226 [svn-r21256] Add libinfo and test to cmake - JIRA 1243
Tested: local linux
2011-08-18 15:59:00 -05:00
Allen Byrne
e99c8dd6bc [svn-r19776] Corrected handling of largefile and linux_lfs handling.
Synched cmake version of H5pubconf.h.in
Added another variation of H5detect warning to ignore list.
2010-11-12 16:18:27 -05:00
Allen Byrne
c00ba4b122 [svn-r19107] Move Resources folder to config/cmake
Tested: Local Linux
2010-07-20 10:29:38 -05:00