Commit Graph

23 Commits

Author SHA1 Message Date
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Quincey Koziol
0313cbb91d Final merge of page buffering branch to develop 2017-03-13 21:30:37 -07:00
Quincey Koziol
c4a36e0bb3 Minor cleanups and bring over "prefetched dirty" fixes for entries loaded from
a cache image.
2017-03-12 01:57:19 -08:00
Quincey Koziol
101fa7af8e Cleanups and normalizations against incoming page_buffering changes. 2017-02-19 18:28:52 -08:00
Allen Byrne
2b383bb8ff HDFFV-10124 Using cache_common.h contains other include files 2017-02-02 11:55:01 -06:00
Dana Robinson
916eaa4ab8 Updated the cache_tagging test so it correctly analyzes
the new fractal heap free space manager behavior.

Also converted the debug output of the cache_tagging
test to use the revised H5AC_dump_cache() function.
2016-11-30 02:20:09 -05:00
Quincey Koziol
9504d3f337 Switch to new, more scalable, metadata cache entry tagging. 2016-11-06 23:14:10 -08:00
Quincey Koziol
bb6cb6adb0 Code style and warning cleanups, from revise_chunks branch. 2016-11-06 12:08:19 -08:00
Dana Robinson
fcaf9c483a [svn-r30002] Fixed some minor warnings in H5AC.c and H5C.c, cleaned up warnings
in the cache tests, and made some huge static arrays dynamic
in the cache tests.

Tested on: 64-bit Ubuntu Linux w/ gcc 5.3.1
           Autotools serial
2016-06-01 12:02:30 -05:00
Mohamad Chaarawi
63c90e5c67 [svn-r29081] - merge in the phdf5_metadata_opt/ branch with the collective metadata optimizations.
- rename H5AC_dxpl_id to H5AC_ind_read_dxpl_id and update all usage in the library

tested on bb-8 with parallel and serial.
2016-02-10 15:48:34 -05:00
Mohamad Chaarawi
91aeb766fa [svn-r28950] - remove META_FLUSH_COLLECTIVELY property for delayed sanity checks from metadata dxpls
- remove H5AC_ind_dxpl_id and use only H5AC_dxpl_id everywhere instead.
- remove flush_me_collectively flag from cache entries
- add a collective sanity check (MPI_Barrier) for every HDF5 API routine that could possibly touch the file. This is trigerred when the environment variable H5_COLL_API_SANITY_CHECK is set to a non 0 digit.

tested on BB-8 with serial and parallel.
2016-01-21 17:31:15 -05:00
Dana Robinson
1ab7e61c39 [svn-r28678] Updated the cache_tagging test to correctly output tags in
the debug/verbose function.

Tested on: 64-bit Ubuntu 15.10 (Linux 4.2.0 x86_64) gcc 5.2.1
           serial only
2015-12-15 21:27:35 -05:00
Quincey Koziol
e78db67c62 [svn-r28606] Description:
Revisions to normalize revise chunks vs. trunk, plus push dataset metadata
changes into the cache immediately (instead of holding them within the dataset
data structures).

Tested on:
    MacOSX/64 10.11.2 (amazon) w/serial & parallel
    (h5committest not required on this branch)
2015-12-13 00:42:36 -05:00
Quincey Koziol
1023374492 [svn-r27768] Description:
Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.

    This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.

    Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros.  (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)

    Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    Linux/64 3.10.x (kituo) w/serial & parallel
    Linux/64 2.6.x (ostrich) w/serial
2015-09-13 22:58:59 -05:00
Quincey Koziol
f30ab55f41 [svn-r27237] Description:
Merge v3 metadata cache changes to trunk.  Yay! :-)

Tested on:
    MacOSX/64 10.10.3 (amazon) w/serial & parallel
    Linux/32 2.6.x (jam) w/serial & parallel
    (daily tested on branch)
2015-06-17 19:58:49 -05:00
Quincey Koziol
8be8a708a3 [svn-r27084] Description:
Clean up cache tests, to align w/v3 metadata cache changes

Tested on:
    MacOSX/64 10.10.3 (amazon) w/serial & parallel
    Linux/32 2.6.* (jam) w/serial & parallel
2015-05-14 21:16:09 -05:00
Quincey Koziol
33ea1ada24 [svn-r25496] Description:
Merge 64-bit ID changes from branch to trunk.  (Plus a few minor cleanups
that aren't on the branch)

Tested on:
    Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN
    (h5committested on branch already for a week)
2014-07-30 15:55:14 -05:00
Vailin Choi
a9602d1b34 [svn-r22676] Changes needed to make the default free-list mapping from H5FD_FLMAP_SINGLE to H5FD_FLMAP_DICHOTOMY. 2012-08-13 15:04:20 -05:00
Quincey Koziol
88a94bbe7f [svn-r22646] Description:
Changes resulting from Klocwork static analysis tool, from Mark Miller
@ LLNL (miller86@llnl.gov).

Tested on:
    Mac OS X/64 10.7.4 (amazon) w/debug, C++ & FORTRAN, using gcc 4.7.x
    (too minor to require h5committest)
2012-08-08 18:01:20 -05:00
Quincey Koziol
e3537b7ee7 [svn-r19114] Description:
Rename H5AC_set() to H5AC_insert_entry()
	Get rid of H5C_set_skip_flags() & related flags

Tested on:
	Mac OS X/32 10.6.4 (amazon) w/debug, production & parallel
	(too simple to require h5committest)
2010-07-20 13:51:24 -05:00
Mike McGreevy
9f208ec4e2 [svn-r19017] Purpose:
Minor code cleanup

Description:

    Add missing declaration of H5AC_ignore_tags() 
    to H5ACprivate.h

    Clean up some warnings in cache_tagging.c 
    test file

Tested:

    jam, gandalf
2010-06-17 12:27:41 -05:00
Mike McGreevy
1c8ec63a3d [svn-r19008] Purpose:
Fix some tagging issues.

Description:

    - changed H5Gcreate to H5Gcreate2 in the cache_tagging.c
      test file to work properly with 1.6 API default
      mapping turned on.

    - Added FUNC_ENTER/LEAVE_*TAG macros to the 
      H5G_stab_valid function.

Tested:

    gandalf, jam, amani (w/ production mode, 1.6 API mapping)
2010-06-16 10:17:39 -05:00
Mike McGreevy
60ecd356b2 [svn-r19005] Purpose:
Commit metadata tagging framework.

Description:

    This check-in contains a new framework whose goal is to apply
    a tag value to each new entry in the metadata cache as it is created. 
    This tag value is such that it relates each piece of metadata to the 
    HDF5 object that it belongs to (dataset, group, et cetera).

    This changeset includes the framework that applies the tags as 
    well as a suite of tests to verify correct tag application, though does
    not yet make use of the tag values to flush/evict individual objects.

    Please refer to the "flush/evict individual objects" RFC for further
    discussion of these changes.

Tested:

    jam, amani, linew (h5committest)
    liberty, abe, blue print
2010-06-15 15:00:22 -05:00