Commit Graph

638 Commits

Author SHA1 Message Date
Larry Knox
6c2a4b728f Add LOCAL_BATCH_SCRIPT_ARG variable for submitting account information
and other batch command variations with ctest command.
2019-02-04 08:46:57 -06:00
Larry Knox
d2624dae03 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop 2019-02-03 21:34:25 -06:00
Larry Knox
dddc940bdf Add batchscript options that work when running ctest directly. 2019-02-03 21:33:16 -06:00
Larry Knox
30df67700c Merge pull request #1517 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'c348d453b583ec9092152e6aef1f7fa9854cf5d9':
  Correct H5DIFF to PH5DIFF in *ctestS.sl.in.cmake list of parallel tests reserved for *ctestP.sl.cmake. Revise options to run batch tests and alternative options for cross compile in HPC/*-HDF5options.cmake.
  Change examples file to zip for CMake zip file.
  Update bin/release for filename changes and HPC-CMake tar file corrections.
  Add new files to MANIFEST. Update permissions for raybsub to 755.
2019-02-02 22:45:55 -06:00
Larry Knox
c348d453b5 Correct H5DIFF to PH5DIFF in *ctestS.sl.in.cmake list of parallel tests
reserved for *ctestP.sl.cmake.
Revise options to run batch tests and alternative options for cross
compile in HPC/*-HDF5options.cmake.
2019-02-02 08:02:48 -06:00
Dana Robinson
2d4f58adf0 Merge pull request #1515 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:pread_vfd_squash to develop
* commit '055208b71c573be3d4b1047b840d4d8b255bc25e':
  Minor tweak to CMake preadwrite entry.
  Updated sec2, log, and core VFDs to use pread/pwrite when available (can be controlled via a configure/CMake option)
2019-02-01 16:01:22 -06:00
Larry Knox
bae744199b Add more specific batch scripts.
Add script raybsub to handle submitting .lsf files on ray with bsub <
script.lsf syntax that we couldn't handle with CMake.
Add hpc-cmake-tgz option for bin/release.
2019-01-31 14:22:52 -06:00
Dana Robinson
f833001e39 Updated sec2, log, and core VFDs to use pread/pwrite when
available (can be controlled via a configure/CMake option)
2019-01-30 17:32:40 -08:00
Larry Knox
64114e331a Add HDF5options.cmake files for serial and parallel tests on HPC
machines (where tests are to be run as batch jobs.
Add README_HPC file with instructions for setting up configuration
to use batch scripts for running tests on HPC machines and some
pointers for cross compiling.
2019-01-28 12:43:35 -06:00
Allen Byrne
41010b8d1e Update CMake 2019-01-23 17:25:41 -06:00
Allen Byrne
f033214796 Add clear objects to ignore tests 2019-01-22 16:30:37 -06:00
Allen Byrne
182e5f7556 Add clear objects to ignore tests 2019-01-22 16:26:43 -06:00
Allen Byrne
036a8e4fe1 Add new clear tests to ignore list 2019-01-22 16:18:22 -06:00
Allen Byrne
cdf9cb0efb Cleanup variable names 2019-01-22 15:38:32 -06:00
Allen Byrne
91249b9ad5 HDFFV-10685 Correct syntax 2019-01-22 12:54:34 -06:00
Allen Byrne
ff08bed268 HDFFV-10685 Corrected version 2019-01-22 12:29:45 -06:00
Allen Byrne
ce64bf57ce HDFFV-10685 Always set Mac version flags - use soversion 2019-01-22 12:10:09 -06:00
Allen Byrne
8adbf2552b Fix CMake policy 54 warnings 2019-01-18 12:16:38 -06:00
Ray Lu
44a67451be Merge pull request #1450 in HDFFV/hdf5 from ~SONGYULU/hdf5_ray:TRILAB-98-dt_arith-and-cpp_testhdf5-tests to develop
* commit 'b02de315b93ac29d2483a91d526b110a25073505':
  NNSA Tri-LabsTRILAB-98: Another two test cases out.
  NNSA Tri-Labs TRILAB-98: Taking out a few more test cases.
  NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu).  All failing cases involve long double data type.
2019-01-08 17:59:03 -06:00
Allen Byrne
b88df58cc9 Add missing define created in configure.ac 2019-01-08 14:31:46 -06:00
Larry Knox
e27df5a5fe Add variables to set up module switch between configure and build for
cross compiling on CrayXC40.
2019-01-07 20:57:18 -06:00
Songyu Lu
75c105a2a4 NNSA Tri-Labs TRILAB-98 dt_arith and cpp_testhdf5 tests fail on sierra.llnl.gov: According to the group decision, simply provide a macro to disable some failing test cases on sierra (IBM power9 cpu). All failing cases involve long double data type. 2019-01-07 20:28:37 -06:00
Larry Knox
3be0fbd817 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~lrknox/hdf5_lrk into develop 2019-01-05 07:50:15 -06:00
Larry Knox
25fe692c5c Configure build directory in batch scripts. 2019-01-05 07:49:19 -06:00
Larry Knox
cceb9f06b8 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '0e34f0feaaeb6d2286f87f695f25fae45c070a42': (26 commits)
  HDFFV-10664 update reference file
  HDFFV-10664 update reference files
  HDFFV-10664 add missing function and check for restriction
  Remove "bad" statements at end of TEST_ERROR.     Formerly arguments to FAIL_PUTS_ERROR
  Add RELEASE.txt entry for HDFFV-10596.
  Add semicolon at end of TEST_ERROR() invocation for consistency.
  Uninstall should remove the libhdf5_hl_fortran links.
  Add symlinks named libhdf5_hl_fortran* to libhdf5hl_fortran in Makefile.am to match cmake install and the name pattern for other hl lib files.
  Change FAIL_PUTS_ERROR to TEST_ERROR.
  Cleaned up the parallel flush test and set t_pflush1 to always fail. Also set CMake to handle this.
  Update calls: H5Dcreate to H5Dcreate2, H5Acreate to H5Acreate2.
  Removed a comment.
  Fix comment
  Align H5Lcreate_ud behavior with documentation for NULL udata pointer
  Update toolchain comment
  Use c99 standard cmake variable
  Add PGI toolchain
  Correction based on code review.
  HDFFV-10664 add check for state before set call
  HDFFV-10546 refactor variable name
  ...
2019-01-05 07:41:12 -06:00
Allen Byrne
6f6d0921c0 Use c99 standard cmake variable 2019-01-02 17:07:37 -06:00
Allen Byrne
f3636c573f HDFFV-10546 refactor variable name 2019-01-02 11:27:55 -06:00
Larry Knox
f9736d817e Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'af21ce90d9465e805807f17da21f93e64e03492a': (46 commits)
  Changed to Unix line endings and chmod -x.
  Fix runtest case for data to stdout in tool
  Updated the parallel install docs.
  Eliminated the need for a separate script variable.
  Flipped swapped testing strings.
  Specify variable type. Remove unnecessary whitespace.
  Added test_vol_plugin.sh to the list of scripts to clean
  Fixed a CMake build issue (CMake still doesn't run the VOL plugin tests)
  Added more sub-tests to the VOL plugin test.
  Added a simple test for registration of VOL connector plugins. Autotools only for right now, but this will be fleshed out in future work.
  OHDR tests now accept h5_fileaccess() fapls. Formatting, informative comments, and minor renaming.
  Fix some CMake listings
  Add error checking to the minimized dset header size calculation. Update printf->HDprintf statements.
  Remove `#if 0` block of deprecated code.
  Fix mistake with H5E_BEGIN_TRY {...} H5E_END_TRY block containing ERROR-raising macros. Formatting tweaks.
  Added a helpful message to the flush script.
  Added a shell script so we can run the parallel flush test on OpenMPI.
  Add "compact" storage test to relative header size comparisons.
  Formatting adjustments.
  Formatting adjustments
  ...
2019-01-02 10:07:31 -06:00
Dana Robinson
1f644fe7cd Changed to Unix line endings and chmod -x. 2019-01-01 14:30:26 -08:00
Larry Knox
126d1e6176 Add .lsf batch scripts and insert the build directory into the scripts
during configuration.
2018-12-28 16:50:48 -06:00
Dana Robinson
552fec96e9 Merge branch 'develop' into md_cache_logging_squash 2018-12-27 22:22:24 -08:00
Dana Robinson
18e6ec82d0 Squash merge of MDC logging changes. 2018-12-20 20:41:42 -08:00
Allen Byrne
7e8923957f HDFFV-10656 Add CHECK_VOL support to CMake 2018-12-20 15:11:27 -06:00
Allen Byrne
eb1b3f42c4 HDFFV=10632 test cleanup 2018-12-06 07:54:19 -06:00
Allen Byrne
e3e24a2989 HDFFV-10632 - split stderr and stdout in cmake 2018-12-03 09:35:59 -06:00
Larry Knox
7bf6e98bd9 Move wait_H5init.cmake up to config/cmake. 2018-11-20 12:09:14 -06:00
Larry Knox
8544aae3e8 Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/hdffv/hdf5 into develop 2018-11-20 11:58:27 -06:00
Larry Knox
720bbdfe61 Changes to CMake code to pause cmake/ctest, waiting for batch jobs to
run and finish.
2018-11-20 11:03:58 -06:00
Allen Byrne
3dc4055aaf Fix typo 2018-11-19 11:41:11 -06:00
Allen Byrne
4bc283a0f2 Standardize script 2018-11-19 11:03:42 -06:00
Allen Byrne
d9fbacff90 add max count to options file 2018-11-19 11:02:20 -06:00
Allen Byrne
a26aedce04 Check PARALLEL_LEVEL maximum 2018-11-19 10:03:18 -06:00
Larry Knox
38f7e3c86b Really don't run parallel tests without option specifying script. 2018-11-14 11:35:36 -06:00
Larry Knox
6cbd463d41 Add script and changes to wait for H5Tinit.c
Add more sample batch scripts, specifically for sbatch, not for knl
cross compile.
Don't run parallel tests when no parallel test script is configured in
HDF5options.cmake.
2018-11-14 11:19:28 -06:00
Allen Byrne
e753904d0b Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'e6545faa5699aae4d5dca23ed40e3080fa9dc72d':
  Update HDF5-Examples version to be included in CMake-* tar/zip files.
  Snapshot version 1.11 release 3.
2018-11-05 16:57:51 -06:00
hdftest
db48399bd8 Snapshot version 1.11 release 3. 2018-11-05 12:21:13 -06:00
Allen Byrne
ae0f4a23c0 Fix typo in whitespace area 2018-10-29 15:52:39 -05:00
Allen Byrne
096279caf7 HDFFV-10608 Move toolchain files into a subfolder 2018-10-22 16:08:52 -05:00
Allen Byrne
164bae2439 TRILAB-36 add option for test script batch command 2018-10-22 15:39:03 -05:00
Allen Byrne
42c8dd66d7 Correct quote char 2018-10-11 14:34:34 -05:00