Commit Graph

25 Commits

Author SHA1 Message Date
Larry Knox
b42635ad88 Hdf5 merge issue 458 v110 (#465)
* close #195. (#196)

* Update HDF5PluginMacros.cmake

* Update HDF5PluginMacros.cmake

* Modify temporary rpath for testing in java example scripts. (#230)

* Fix undefined left shifting of negative numbers (#338)

Undefined Bahavior Sanitizer errored here about left shifting negative numbers.

* Update license url (#332)

* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
file - src and test directories.

* Applied clang-tidy readability-non-const-parameter warning fixes auto… (#429)

* Automatically applied clang-tidy readability-avoid-const-params-in-decls fixes

Removes useless const declarations.

* Fixed most readability-non-const-parameter warnings

These changes were made automatically by clang-tidy, but I manually reverted the changes related to the H5Z_func_t signature.

* Reformat source with clang v10.0.1.

Co-authored-by: Larry Knox <lrknox@hdfgroup.org>

* Added C++11 override keyword where appropriate (#433)

Added H5_OVERRIDE macro for compatibility with both C++11 and older.

* Various clang tidy warning fixes (#448)

* Fixed clang-tidy bugprone-reserved-identifier warnings

* Fixed clang-tidy bugprone-assert-side-effect warnings

* Fixed clang-tidy bugprone-copy-constructor-init warning

* Fixed clang-tidy readability-redundant-preprocessor warning

For error_test.c the removed code was already dead, because it was in the else of an `#if H5_USE_16_API` block.

Based on H5Location.h, I think p_get_ref_obj_type was meant to be in `#ifndef DOXYGEN_SHOULD_SKIP_THIS` and an `#endif` was missing.  Similarly, in the header, getObjTypeByIdx is only in H5_NO_DEPRECATED_SYMBOLS, not DOXYGEN_SHOULD_SKIP_THIS.

* Fixed clang-tidy readability-redundant-string-init warnings

* Fixed some clang-tidy performance-type-promotion-in-math-fn warnings

* Fixed clang-tidy performance-unnecessary-value-param warnings

* Reformat source with clang v10.0.1.

Co-authored-by: Larry Knox <lrknox@hdfgroup.org>

* Removed checks/workarounds for pre-C++89 compatibility (#449)

After 30+ years, just assume that the following exist:
- extension-less includes
- namespaces
- std::
- static_cast
- bool

* Fixed all clang-tidy bugprone-suspicious-string-compare warnings (#451)

* Fixed all clang-tidy bugprone-suspicious-string-compare warnings

This change was generated entirely by clang-tidy itself.

* Reformat code with clang v10.0.1.

Co-authored-by: Larry Knox <lrknox@hdfgroup.org>

* Fix clang-tidy suspicious string compare in H5A.c missed in merge.

Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Sean McBride <sean@rogue-research.com>
2021-03-12 11:58:10 -06:00
Allen Byrne
583e9d5c32 1 10 Merges from develop (#424)
* HDFFV-10865 - merge from dev, HDFArray perf fix.

* Remove duplicate setting

* Whitespace changes after clang format

* Undo version 11 clang format changes

* Merge CMake changes from develop

* test testing script merge from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge small changes from develop

* Minor non-space formatting changes

* #386 copyright corrections for java folder

* Merges from develop

#358 patches from vtk
#361 fix header guard spelling

* Merge updates

#358 patches from vtk
#361 fix header guard spelling

* format fix

* Fix missing underscore and make H5public.h closer to dev

* Merges from develop

#340 clang -Wformat-security warnings
#360 Fixed uninitialized warnings
header guard underscore cleanup
JNI cleanup

* format alignment

* Add missing test ref file
2021-03-04 16:06:47 -06:00
Larry Knox
dea591a353 Hdf5 1 10 update license url part2 (#404)
* close #195. (#196)

* Update HDF5PluginMacros.cmake

* Update HDF5PluginMacros.cmake

* Modify temporary rpath for testing in java example scripts. (#230)

* Fix undefined left shifting of negative numbers (#338)

Undefined Bahavior Sanitizer errored here about left shifting negative numbers.

* Update license url (#332)

* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
file - src and test directories.

* Update license url part2 (#333)

* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
    file - files not in src or test.

* Update URL in source file Copyright headers for web.

Co-authored-by: H. Joe Lee <hyoklee@hdfgroup.org>
Co-authored-by: Sean McBride <sean@rogue-research.com>
2021-03-01 10:35:51 -06:00
Allen Byrne
ec8ad09125 Source formatted 2020-10-01 10:29:53 -05:00
Dana Robinson
88ecc17474 Removes email and Modifications sections 2020-08-16 18:04:48 -07:00
Allen Byrne
099c7242fb Merge from dev of tools changes 2020-07-22 15:03:22 -05:00
Allen Byrne
467b5d565c Merge CMake and tools changes from develop 2020-02-27 16:54:52 -06:00
lrknox
25ec07450a Change copyright headers to replace url referring to file to be removed
and replace it with new url for COPYING file.

Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
2017-04-14 11:54:16 -05:00
Allen Byrne
f1c4d0ff3f [svn-r26352] Update h5dump to latest BNF - reg vs irreg hyperslabs. 2015-03-04 08:34:24 -05:00
Allen Byrne
b1251c915e [svn-r26287] Rename point and block str functions generically.
Add info arg to print virtual selection function.
2015-02-23 15:23:56 -05:00
Peter Cao
fcf96afeb2 [svn-r22052] - h5dump: Added capability for "-a" option to show attributes containing "/"
by using an escape character. For example, for a dataset "/dset" 
               containing attribute "speed(m/h)", use "h5dump -a "/dset/speed(\/h)" 
               to show the content of the attribute. See details at HDFFV-7523
2012-03-12 16:27:11 -05:00
Allen Byrne
f55a1344ad [svn-r21956] Windows DLL macro missing on functions in header 2012-02-17 21:05:56 -05:00
Quincey Koziol
54d5a565f9 [svn-r19237] Description:
Clean up misc. compiler warnings.

Tested on:
        FreeBSD/32 6.3 (duty) in debug mode
        Mac OS X/32 10.6.4 (amazon) w/C++ & FORTRAN, w/threadsafe,
                in production mode
        Mac OS X/32 10.6.4 (amazon) w/parallel, in debug mode
2010-08-12 16:11:00 -05:00
Quincey Koziol
fd70b2afa8 [svn-r18197] Description:
Trim trailing whitespace from source code files with this command:

find . \( -name "*.[ch]" -or -name "*.cpp" -or -name "*.f90" \) -print |xargs -n 1 sed -i "" 's/[[:blank:]]*$//'

Tested on:
    None - eyeballed only
2010-01-29 23:29:13 -05:00
Allen Byrne
c7590ca38e [svn-r17450] Bring h5dump single subsetting selection and region reference changes from NPOESS
Tested: local linux smirom
2009-09-04 09:50:13 -05:00
Quincey Koziol
579284f422 [svn-r14144] Description:
Move H5Gget_objinfo() to deprecated symbols section and retarget
internal usage to H5Lget_info()/H5Oget_info().

	Misc. other code cleanups...

Tested on:
	FreeBSD/32 6.2 (duty)
	FreeBSD/64 6.2 (liberty)
	Linux/32 2.6 (kagiso)
	Linux/64 2.6 (smirom)
	AIX/32 5.3 (copper)
	Solaris/32 2.10 (linew)
	Mac OS X/32 10.4.10 (amazon)
2007-09-13 10:44:56 -05:00
Pedro Vicente Nunes
c24cea791f [svn-r13503]
Preparation for making 1.6 and 1.7 h5dump more similar and 1.6 to have 1.7 fixed bugs incorporated
2007-03-12 11:36:34 -05:00
Albert Cheng
ed7d456e51 [svn-r13253] Updated all C and C++ style source code files with the THG copyright notice.
Tested platform:
Kagiso only since it is only a comment block change.  If it works in one
machine, it should work in all, I hope.  Still need to check the parallel
build on copper.
2007-02-07 09:56:24 -05:00
Quincey Koziol
14dcb6db33 [svn-r12736] Description:
Add "use the latest format" support for dataspace object header encode/
decode routines and clean up format a bit for the latest format (new to 1.8.x
releases)

    Remove storing 'perm' parameter for array datatypes in memory and the file,
and add test to make certain that if any user applications are attempting to
store them, we get some reports back.  (Should be unlikely, since the RefMan
says that the parameter is not implemented and is unsupported).
    Carry those changes into the tests, etc.

    Clean up a bunch more compiler warnings.

Tested on:
    FreeBSD/32 4.11 (sleipnir) w/threadsafe
    Linux/32 2.4 (heping) w/FORTRAN & C++
    Linux/64 2.4 (mir) w/enable-1.6-compat
2006-10-08 23:18:18 -05:00
Quincey Koziol
56e3f667d6 [svn-r11886] Purpose:
Code cleanup

Description:
    Check in some of the code cleanups from working on the external link
support.  (This doesn't include any of the external link features)

Platforms tested:
    FreeBSD 4.11 (sleipnir)
    Mac OSX.4 (amazon)
    Linux 2.4
2006-01-23 15:46:34 -05:00
Pedro Vicente Nunes
983e9a9e26 [svn-r9961]
Purpose:
bug fix, new test file

Description:
h5dump was not properly displaying array indices > 3D

Solution:
added the same algorythm and data structure that h5diff uses to calculate the array index
from a element number position

Platforms tested:
linux
solaris






Misc. update:
2005-02-08 15:55:17 -05:00
Bill Wendling
eb018ba036 [svn-r6544] Purpose:
Update

Description:
    Update copyright statement

Platforms tested:
    Linux (Comment change only)

Misc. update:
2003-03-31 13:10:51 -05:00
Quincey Koziol
d41b9fffdf [svn-r4012] Purpose:
Clean up compiler warnings.
Description:
    Just code neatening mostly, some casts, etc.
Platforms tested:
    FreeBSD 4.3 (hawkwind)
2001-06-18 15:22:10 -05:00
Bill Wendling
1b60816eb1 [svn-r3572] Purpose:
Code Movement
Description:
    Moved some functions which worked only with the h5tools_str_t
    structure from the h5tools module to the h5tools_str module.
Platforms tested:
    Linux
2001-03-08 15:19:30 -05:00
Bill Wendling
8d1b51e1ee [svn-r3490] Purpose:
Code Movement
Description:
    Moved tools code into own separate directories. This is the library
    code all of them share.
Platforms tested:
    Linux, Kelgia
2001-02-22 16:55:15 -05:00