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4e5bdb8c4e2c1b2b5636b831c0e7b4355526ccfc
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63 Commits

Author SHA1 Message Date
Allen Byrne
c8fdd92cd4 Update CMake code to 3.18 minimum version (#2080) 
* Update CMake code to 3.18 minimum version

* Updated release note
 2022-09-02 17:31:29 -07:00
Dana Robinson
7f6261a677 Removes cmake_ext_mod (files moved to cmake) (#2041) 
At one time this content was a git submodule shared between several
projects but that time has long passed.
 2022-08-19 07:54:42 -07:00
Allen Byrne
956282fa6f Develop cmake clean (#1971) 2022-08-06 23:59:31 -05:00
Dana Robinson
fcf41b3cd6 Onion VFD (#1953) 
* Onion VFD feature

* Fixes onion VFD errors with non-sec2 backing store VFDs

* Disables the onion VFD tests w/ ph5diff

* Disables non-sec2 VFDs as onion VFD backing stores

* Committing clang-format changes

* Formatted source

* Typo

* Adds onion VFD tools tests to CMake

* Fixes for v16 API compatibility

* Memset structs to avoid bad frees on errors

* H5Dwrite() calls now use H5T_NATIVE_INT as the memory type vs LE

* Properly decodes checksums on BE machines

* Be more careful about uint64_t to haddr_t/hsize_t conversions

* Another fix for BE data comparison

* Removed double underscores from onion constants

* Replace hard-coded onion header string w/ constant

* Fixes cleanup paths in H5FD__onion_ingest_history()

* Fixed use of size_t revision numbers

* Fix h5dump revision count format string

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
 2022-08-02 12:54:40 -07:00
Scot Breitenfeld
f859cb732b Fixed Spelling Errors (#1166) 
* fixed missed closing of a dataset

* fixed missed closing of a dataset

* fixed typo in error return

* Committing clang-format changes

* minor edits

* code format

* Committing clang-format changes

* code format

* minor edit

* switched from using MPI_count, to actual bytes written for H5FD_mpio_debug rw debugging

* Committing clang-format changes

* changed size_i in printf to reflect the I/O.

* Committing clang-format changes

* Fixed seg fault with xlf on BE with -qintsize=8

* fixed error function string

* spelling corrections via codespell, added new spell check github actions

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* misc

* misc

* misc

* misc

* misc

* Committing clang-format changes

* misc

* work around for https://github.com/codespell-project/codespell/issues/2137

* misc

* added missing file

* misc

* misc.

* misc

* switch to using Codespell with GitHub Actions

* misc.

* misc.

* fixed more sp errors

* Fix new typos found by codespell.

* fixed proceed with precede

* fixed variable in fortran test

* fixed minnum

* updated spelling list

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
 2021-12-07 08:27:29 -06:00
Larry Knox
8d1fe44164 H5repack tests should fail if a corrupted file causes h5repack to (#1138) 
* H5repack tests should fail if a corrupted file causes h5repack to
segfault/core dump.

* Add release note for HDFV-10590, CVE-2018-17432.
 2021-10-25 21:17:44 -05:00
bmribler
9fb2c24c2e Bmr dev hdffv 11223 (#640) 
* Fixed HDFFV-11223 (CVE-2018-14460)

Description
    - Added checks against buffer size to prevent segfault, in case of data
      corruption, for sdim->size and sdim->max.
    - Renamed data files in an existing test to shorten their length
      as agreed with other developers previously.
Platforms tested:
    Linux/64 (jelly)

* Committing clang-format changes

* Updated for test files

* Updated for HDFFV-11223

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
 2021-05-12 14:35:53 -05:00
Larry Knox
2ea165efd0 Update license url part2 (#333) 
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
    file - files not in src or test.
 2021-02-17 08:52:36 -06:00
Binh-Minh Ribler
5b5654bf48 Removed the line, added by mistake. 2020-11-11 22:28:26 -06:00
Binh-Minh Ribler
ff1e052108 Added a missing line. 2020-11-11 22:01:25 -06:00
Binh-Minh Ribler
9914e52e16 Fixed typo again. 2020-11-11 15:02:34 -06:00
Binh-Minh Ribler
ea8b05fa1e Fixed typo 2020-11-11 14:56:41 -06:00
Binh-Minh Ribler
7ade95c572 Miscellaneous update 
- added test for CMake
- renamed new input file to conform to the existing files
 2020-11-11 14:42:11 -06:00
Allen Byrne
7603d2c8be HDFFV-9984 fix test logic 2020-08-14 16:39:40 -05:00
Allen Byrne
646872cb8e HDFFV-9984 - add missing ref files 2020-08-14 13:45:31 -05:00
Allen Byrne
500d87fd1f HDFFV-9984 Add options to merge/prune external links during repack 2020-08-14 12:16:58 -05:00
Allen Byrne
f7212df030 HDFFV-11036 add file compare test process 2020-02-24 12:45:22 -06:00
Allen Byrne
527aaa32b2 HDFFV-11011 correct issues with target file extension 2020-01-28 13:14:59 -06:00
Allen Byrne
87a8951fa0 Remove cmake macros from valgrind tests 2020-01-25 09:36:20 -06:00
Allen Byrne
e8ad5f6d1a HDFFV-10876 Update dump to match DDL spec 2019-12-05 17:21:02 -06:00
Allen Byrne
643d298823 HDFFV-10918 add tests for h5repack ext storage 2019-10-01 16:38:48 -05:00
Jacob Smith
4ecc50bc13 Update to current external file population. 2019-09-24 15:29:56 -05:00
Jacob Smith
35a9e9c50f Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-09-23 17:23:02 -05:00
Allen Byrne
0147a6c713 Fix VFD tests and repack 2019-08-03 17:28:50 -05:00
Allen Byrne
6a932198aa HDFFV-10529 Update CMake tests to use test fixtures 2019-07-23 16:24:56 -05:00
Jacob Smith
c7f8cb011d Merge branch 'develop' of https://bitbucket.hdfgroup.org/scm/~jake.smith/hdf5 into bugfix/repack_external_storage 2019-07-22 17:09:54 -05:00
Allen Byrne
f724e86727 HDFFV-10845 use of TARGETFILE disables auto emulator 2019-07-17 11:58:04 -05:00
Allen Byrne
468b130be3 Add lib dir for testing plugins 2019-06-21 13:46:46 -05:00
Jacob Smith
27d5742b39 Merge branch 'develop' into bugfix/repack_external_storage 2019-06-20 12:37:27 -05:00
Jacob Smith
2ba7b8f5e0 Fix failing automated reporting. 
Add 8-bit big-endian testfile.
 2019-06-19 17:15:05 -05:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets 
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
 2019-06-18 07:46:25 -05:00
Allen Byrne
68bddef35d HDFFV-10741 - remove SKIP_ERRSTK_TESTS option 2019-04-15 14:46:23 -05:00
Allen Byrne
6e2e461087 HDFFV-10741 - add option to skip tool error stack tests 2019-03-26 14:00:34 -05:00
Allen Byrne
122b63a5a2 HDFFV-10703 Update CMake commands to latest standard 2019-02-15 15:48:24 -06:00
Allen Byrne
991996b251 Remove unused CMake files 2018-12-21 12:22:32 -06:00
Allen Byrne
7e8923957f HDFFV-10656 Add CHECK_VOL support to CMake 2018-12-20 15:11:27 -06:00
Allen Byrne
d6de299f01 Need nonexistent file to skip stdout compare 2018-12-04 23:16:03 -06:00
Allen Byrne
e3e24a2989 HDFFV-10632 - split stderr and stdout in cmake 2018-12-03 09:35:59 -06:00
Allen Byrne
79903575e6 HDFFV-10605 Only test plugins if SHARED enabled 2018-11-06 15:45:58 -06:00
Allen Byrne
8d7bdb7041 CMake changes for SKIPPED and flush tests 2018-09-24 14:38:46 -05:00
Allen Byrne
6d75a3ffb4 Fix misaligned macro 2018-03-07 15:55:33 -06:00
Allen Byrne
8347a31871 Fix CMake missing parens 2018-03-07 15:46:58 -06:00
Binh-Minh Ribler
f05f9d4cff Miscellaneous test fixes 
Description:
    - dtypes.c: added the use of highest version of nested datatypes to
      verify the datatype's version.
    - miscellaneous typos
Platforms tested:
    Linux/64 (jelly)
    Darwin (osx1010test)
 2018-03-06 11:41:33 -06:00
Binh-Minh Ribler
2b50dc9855 Added h5repack tests 
Description:
    Added tests SUPERBLOCK and INVALIDBOUNDS, composed by ADB.
Platforms tested:
    Linux/64 (jelly) - cmake
 2018-03-06 09:02:32 -06:00
Binh-Minh Ribler
f2ff00bd7a Added bounds_latest_latest.h5 2018-02-28 14:40:13 -06:00
Allen Byrne
cf3342f8fc Fix tools error handling and valgrind issues 2017-10-18 14:03:27 -05:00
Allen Byrne
66990bc90f HDFFV-10297 - code changes nullify error 2017-10-09 13:23:02 -05:00
Allen Byrne
32a1b98a6c Correct depends name 2017-10-03 12:26:40 -05:00
Allen Byrne
4c0784696b Fix list of names 2017-10-03 11:26:18 -05:00
Allen Byrne
a8f03185ad Fix repack plugin test - reorganize test macros 2017-10-03 11:14:35 -05:00