Commit Graph

30 Commits

Author SHA1 Message Date
Larry Knox
11dfa25910 Update copyright headers (#2184)
* Updated source file copyright headers to remove "Copyright by the Board of Trustees
of the University of Illinois", which is kept in the top-level COPYING file.
2022-11-01 16:02:27 -05:00
Sean McBride
c064d3481b sprintf to snprintf (#1815)
* Straightforward conversion of sprintf to the safer snprintf

* Trickier conversion of sprintf to safer snprintf

This involved minor changes to private function signatures to take the size of the buffer.

* Committing clang-format changes

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2022-06-22 11:58:18 -07:00
Neil Fortner
0f847f30bc Fix issue with H5_now_usec() with 32 bit systems (#1416)
* Implement H5ESget_requests() to retrieve request pointers and
corresponding connector IDs from an event set.  Add tests for this
function.

* Add "order" parameter to H5ESget_requests, to allow the user to specify
the order in which requests are returned.

* Fix bugs with H5ESinsert_request()

* Change H5ESget_requests() API to have separate input and output
parameters for the allocated array length(s) (in) and the number of events in
the event set (out).

* Fix issue with H5_now_usec() with 32 bit systems.  Also improve event
set test.

* Committing clang-format changes

* Add comments to H5_now_usec() explaining rationale for uint64_t casts.

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2022-02-10 17:23:26 -06:00
Dana Robinson
9023e98940 Removes gratuitous (double)x.yF casts (#632)
* Committing clang-format changes

* Removes gratuitous (double)x.yF casts

* Committing clang-format changes

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-05-07 11:45:05 -05:00
Sean McBride
0a2a385acc Fixed uninitialized warnings (#360)
* Fixed all -Wsometimes-uninitialized warnings by initializing variables

* Fixed all -Wconditional-uninitialized warnings by initializing variables

* Commit alignment changes from running bin/format_source with clang
version 10.0.1.

Co-authored-by: Larry Knox <lrknox@hdfgroup.org>
2021-02-19 11:25:44 -06:00
Larry Knox
4819f89d3f Update license url (#332)
* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING
file - src and test directories.
2021-02-17 08:52:04 -06:00
Allen Byrne
6db183590f develop revert source to clang-format version 11 (#293)
* OESS-98 convert plugin option to FetchContent, add tests

* Fixes for pkcfg files because of plugin option

* OESS-98 fix tools test for plugins

* Keep doxygen comments under 100 chars long - format hint

* Whitespace

* HDFFV-11144 - Reclassify CMake messages

* HDFFV-11099/11100 added help text

* Reworked switch statement to compare string instead

* Fix typo

* Update CDash mode

* Correct name of threadsafe

* Correct option name

* Undo accidental commit

* Note LLVM 10 to 11 format default changes

* Update format plugin

* Undo clang-format version 11 changes

* One more correction
2021-01-29 06:55:18 -06:00
Quincey Koziol
5ff09ae971 Basic alignment with async branch (#115)
* Basic alignment with async branch - trivial changes to reduce clutter in overall diff.

* Update minor error code to reflect change within library

* Update the error output to match library
2020-11-23 10:18:26 -06:00
Gerd Heber
0a06b9a869 First cut of the H5 public API documentation. (#80)
* First cut of the H5 public API documentation.

* Added H5Z "bonus track."

* Applied Quincey's patch.

* Added the missing patches from Quincey's original patch.

* H5PL (complete) and basic H5VL API documentation.

* Added H5I API docs.

* Added H5L API docs.

* First installment from Elena's H5T batch.

* Second installment of Elena's H5T batch.

* Final installment of Elena's H5T batch.
2020-11-18 09:06:01 -06:00
Allen Byrne
b2d661b508 Clang-format of source files 2020-09-30 09:27:10 -05:00
Quincey Koziol
07e4ef9da4 Clean up private / package / static namespace issues (function naming, which
header file, FUNC_ENTER / LEAVE, etc).  Removed remaining personal email
addresses from library source code (still needs cleaned from other directories).
Misc. warning, style, and whitespace cleanup.
2020-08-06 15:56:04 -05:00
Dana Robinson
4305d9677b Fallback to older time functions in new timer code. 2020-07-14 05:01:22 -07:00
Quincey Koziol
71b601d0d3 Clean up warnings 2020-06-27 20:02:51 -05:00
Quincey Koziol
7bdab523b3 Refactor code to remove remaining checks for H5_HAVE_GETTIMEOFDAY scattered around in various places. Also clean up iopipe.c. 2020-06-27 09:47:55 -05:00
Quincey Koziol
949649a2b6 Correct mistake in H5_now_usec calculation for clock_gettime. 2017-09-24 14:08:40 -05:00
Quincey Koziol
e70dc43d6b Update H5_now_usec to prefer using clock_gettime. 2017-09-23 21:47:07 -05:00
Quincey Koziol
d5c3ec8b93 Changes to make timers within the library monotonic. 2017-09-03 02:53:28 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Quincey Koziol
bb19817c9f [svn-r30189] Description:
Clean up more warnings: drop the warning count from ~1310 down to ~940,
with only 31 types of warnings in 148 files (down from 38 types in 167 files).

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-07-17 19:18:42 -05:00
Dana Robinson
8f874a5010 [svn-r29395] Corrected parentheses in floating-point compare macros.
Corrected H5_EB and H5_PB macros.

Tested on: 64-bit Ubuntu 15.10 w/ gcc 5.2.1
           autotools serial w/ Java, Fortran, & C++
2016-03-12 04:23:51 -05:00
Dana Robinson
52607ae900 [svn-r26427] Revert of r26426
The repository wasn't clean when I made some changes so untested
code was committed.
2015-03-11 01:39:48 -05:00
Dana Robinson
3ed20376e0 [svn-r26426] Merge of r26424 from the autotools_rework branch.
Made the chkmanifest script a little more sh-friendly.

Tested: Manually on jam by modifying svn-controlled files
2015-03-11 01:35:51 -05:00
Dana Robinson
d8e3d8e908 [svn-r26333] Eliminates gcc warnings due to -Wunsuffixed-float-constants.
- Adds 'F' suffixes for most float constants.

- A few constants MUST be of type double. These now receive the long
  double L suffix and are then cast to double. I do this via a new
  H5_DOUBLE() macro which was added to H5private.h.

Fixes: HDFFV-9148

Tested on: h5committest
2015-03-01 13:48:54 -05:00
Quincey Koziol
424a41f878 [svn-r23713] Description:
Clean up warnings, switch library code to use Standard C/POSIX wrapper
macros, remove internal calls to API routines, update checkapi and checkposix
scripts.

Tested on:
    Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN
    Big-Endian Linux/64 (ostrich)
2013-05-21 12:30:54 -05:00
Dana Robinson
9978868c11 [svn-r20499] Fixes erroneous H5_HAVE_GETTIMEOFDAY behavior on Windows (JIRA HDFFV-5931). Previously, H5_HAVE_GETTIMEOFDAY was never properly defined. The timezone struct and Wgettimeofday() timezone output was also added.
This is a merge of several changesets from the log_vfd branch where this work took place: 20355, 20359, 20411, 20413, 20431, 20460

Tested on: Windows
2011-04-14 14:33:15 -05:00
Quincey Koziol
20a020a1c7 [svn-r18612] Description:
Clean up compiler warnings & code formatting

Tested on:
    Mac OS X/32 10.6.3 (amazon) w/debug
    (too minor to require h5committest)
2010-04-22 10:08:08 -05:00
Quincey Koziol
d4265f783c [svn-r18610] Description:
Clean up compiler warnings & code formatting issues.

Tested on:
    Mac OS X/32 10.6.3 (amazon) w/debug)
    (too minor to require h5committest)
2010-04-22 08:35:58 -05:00
Albert Cheng
ed7d456e51 [svn-r13253] Updated all C and C++ style source code files with the THG copyright notice.
Tested platform:
Kagiso only since it is only a comment block change.  If it works in one
machine, it should work in all, I hope.  Still need to check the parallel
build on copper.
2007-02-07 09:56:24 -05:00
Quincey Koziol
0bd83631d5 [svn-r12990] Description:
When using the latest version of the file format, move the "modification
time" information into the object header prefix, which is more efficient.
Also add "access time" and "change time" (for metadata) fields, all of which
take about the same space as the previous modification time header message.

Tested on:
    Linux/32 2.6 (chicago)
    Linux/64 2.6 (chicago2)
2006-11-28 12:43:54 -05:00
Quincey Koziol
5fe34046c0 [svn-r12605] Description:
Break out a bunch of the misc. routines that were in src/H5.c into more
specific modules.

    Add optimized fletcher32 checksum routine, for checksumming metadata as
well as raw data.

Tested On:
    Linux/32 2.6 (chicago)
    Linux/64 2.6 (chicago2)
    Will test further after checkin...
2006-08-21 18:27:11 -05:00