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75 Commits

Author SHA1 Message Date
David Young
c8f533cfc3 Merge all of my changes from merge-back-to-feature-vfd_swmr-attempt-1, 
including the merge of `hdffv/hdf5/develop`, back to the branch that Vailin and
I share.

Now I need to put this branch on a fork with a less confusing name than
vchoi_fork!
 2019-12-09 10:30:58 -06:00
David Young
743c9358d1 Introduce PRI*HADDR and PRI*HSIZE for printing haddr_t and hsize_t. 2019-10-03 17:34:05 -05:00
Vailin Choi
b178d80be0 Changes made based on feedback from pull request #1039. 2018-05-14 12:26:48 -05:00
Vailin Choi
e6bc326ec0 Fix for HDFFV-10180 Performance issues with H5Oget_info. 2018-04-24 15:10:13 -05:00
Allen Byrne
f0b0c35afb HDFFV-10396 Eliminate overuse of h5tools_simple_prefix function 2018-01-25 09:58:24 -06:00
Allen Byrne
8e2cedd066 HDFFV-10297 Cleanup, Initialize variables 2017-10-23 09:26:15 -05:00
Allen Byrne
448217e7e3 HDFFV-10297 Fix compiler compaliants 2017-10-16 09:19:41 -05:00
Allen Byrne
d5c073d406 HDFFV-10296 Update tools lib to use the error handling macros. 2017-10-13 16:34:01 -05:00
Dana Robinson
ee7816bbfb Stripped C standard library headers (and a couple of macros) 
from the tools code. This is all handled in H5private.h, which
should be included in all tools source files.
 2017-07-17 13:24:01 -05:00
Allen Byrne
445c805a4c HDFFV-10186 Add endianess to bitfield and fix tests 2017-05-10 10:59:13 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10 
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
 2017-04-25 16:05:36 -05:00
Quincey Koziol
101fa7af8e Cleanups and normalizations against incoming page_buffering changes. 2017-02-19 18:28:52 -08:00
Quincey Koziol
57afb68e46 Bring SWMR-related tools changes from revise_chunks to develop. 2016-12-11 11:25:08 -08:00
Quincey Koziol
83724bd787 [svn-r30113] Description: 
Clean up warnings (from 2774 -> 1560, with my standard debug build)

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
 2016-06-28 16:53:48 -05:00
Allen Byrne
40cdbe0b8d [svn-r29274] HDFFV-9698: fix subsetting issues with h5dump 2016-03-04 15:41:12 -05:00
Allen Byrne
d0444d4f2b [svn-r29261] HDFFV-9241: Print fill value as "DEFAULT" instead of value 0 2016-03-03 10:27:48 -05:00
Allen Byrne
f0a7f5978e [svn-r29257] HDFFV-9705: h5dump should not print filters or allocation time info for VDS files 2016-03-03 08:56:44 -05:00
Larry Knox
b3426914a8 [svn-r28669] Changes to correct errors found with -ansi flag. 
h5tools_dump.c
    Removed 3 lines commented out with //.
h5_vds-percival-unlim.c
    Changed C++-style comment to C-style comment.

Tested with h5committest.new.
 2015-12-15 15:52:12 -05:00
Quincey Koziol
d3c6b4ad72 [svn-r27848] Description: 
Clean up warnings and some normalization against trunk.

Tested:
    McaOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
 2015-09-21 19:21:18 -05:00
Quincey Koziol
0695d6366a [svn-r27835] Description: 
Sync w/trunk.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
 2015-09-20 21:18:45 -05:00
Dana Robinson
d90e4acfa7 [svn-r27801] Minor warning fixes in the tools. 
Tested on: jam (too minor for h5committest)
 2015-09-16 10:23:16 -05:00
Quincey Koziol
db8e289abe [svn-r27632] Description: 
Revert changes to pass file pointer to selection serialize/deserialize
routines.  Also patch back in some changes that were merged out in the
previous merge w/trunk.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial
    (h5committest not required on this branch)
 2015-08-31 16:58:15 -05:00
Quincey Koziol
2c91cbecc6 [svn-r27630] Description: 
Bring in changes from the trunk, through r27628.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial
    (h5committest not required on this branch)
 2015-08-31 15:14:57 -05:00
Dana Robinson
c226e58005 [svn-r27626] Various minor warning fixes before major SWMR and VDS merges. 
gcc 4.9.2 was used to create the warning list

- implicit casts
- shadowed variables
- various enum issues
- other minor fixes (comments, unused macros, etc.)

Tested on: h5committest
 2015-08-31 14:04:23 -05:00
Allen Byrne
78e128c544 [svn-r27195] Add h5dump cmake tests and files. 
Add tools gen cmake files
move testfiles for pbits to subdir as well as vds

Tested: local linux
 2015-06-12 16:29:20 -05:00
Allen Byrne
11efaf4ff7 [svn-r26798] Fix other storage layout whitespace 2015-04-13 15:47:03 -05:00
Allen Byrne
26e709edc6 [svn-r26794] Fix formatting for selection. Irregular reuses blocks and points for datasets however indentation after line breaks are an issue. 2015-04-13 15:15:00 -05:00
Neil Fortner
6a27582a44 [svn-r26781] Merge revisions 26305 through 26780 from trunk to vds branch. 
Tested: ummon
 2015-04-10 18:00:48 -05:00
Allen Byrne
e270981617 [svn-r26611] Remove complete section of VIRTUAL output. 2015-03-27 09:23:24 -05:00
Elena Pourmal
1180e6f96d [svn-r26570] Commented lineis that print extra "VIRTUAL" keyword and blank lines for demo on 3/25/2015. Allen will need to review it. 2015-03-24 23:08:59 -05:00
Elena Pourmal
dd0e7540b6 [svn-r26567] h5dump was nopt displaying source selection correctly due to a type; fixed. 2015-03-24 18:31:00 -05:00
Allen Byrne
66a9948e65 [svn-r26442] Removed blank line and fixed ALL output 2015-03-12 17:29:59 -05:00
Allen Byrne
4edde43ae5 [svn-r26440] Added new structure, removed ";", used static hyperslab arrays. 2015-03-12 16:22:48 -05:00
Allen Byrne
92d7b82d61 [svn-r26418] Fix initial indent for selection_all 2015-03-10 15:53:57 -05:00
Allen Byrne
9cdf806eec [svn-r26383] Add MAPPING to VDS output 2015-03-06 12:53:56 -05:00
Allen Byrne
1aa5cd4fa5 [svn-r26353] Add VDS selection defines for ALL and NONE 2015-03-04 09:08:58 -05:00
Allen Byrne
f1c4d0ff3f [svn-r26352] Update h5dump to latest BNF - reg vs irreg hyperslabs. 2015-03-04 08:34:24 -05:00
Allen Byrne
45df14138d [svn-r26318] Update virtual layout to latest changes 2015-02-26 10:59:15 -05:00
Allen Byrne
aad4250bd6 [svn-r26305] convert dump_dcpl to use switch statement 
Add default case
refactor out start ctx and end ctx
Tested: local linux
 2015-02-25 15:20:31 -05:00
Elena Pourmal
99a3f4d8d4 [svn-r26297] Changed example and h5dump according to suggestions at today's code review VDS-176. 
BNF has been updated too. Now h5dump displays VDS like this:

HDF5 "vds.h5" {
GROUP "/" {
   DATASET "VDS" {
      DATATYPE  H5T_STD_I32LE
      DATASPACE  SIMPLE { ( 4, 6 ) / ( 4, 6 ) }
      STORAGE_LAYOUT {
         VIRTUAL {
             HYPERSLAB { (0,0)-(0,5) };
             a.h5;
             A;
             ALL;
             HYPERSLAB { (1,0)-(1,5) };
             b.h5;
             B;
             ALL;
             HYPERSLAB { (2,0)-(2,5) };
             c.h5;
             C;
             ALL;
            }
         }
      }
      FILTERS {
.......
I just commented the code with "EIP" and didn't delete to simplify the review with Allen tomorrow.

Tested on jam
 2015-02-24 23:19:41 -05:00
Allen Byrne
3f72ec11cd [svn-r26295] add space before end bracket of selection 2015-02-24 15:39:08 -05:00
Allen Byrne
80e77e7d77 [svn-r26290] Add H5S prefix to selection name 2015-02-23 16:52:03 -05:00
Allen Byrne
bc888966a9 [svn-r26288] remove extra set of brackets 2015-02-23 15:30:53 -05:00
Allen Byrne
b1251c915e [svn-r26287] Rename point and block str functions generically. 
Add info arg to print virtual selection function.
 2015-02-23 15:23:56 -05:00
Allen Byrne
a0ead57cad [svn-r26286] Print selection types - no values 2015-02-23 14:19:19 -05:00
Allen Byrne
cd9b96a887 [svn-r26285] add virtual mapping output blank selections but actual file and dataset names. 2015-02-23 13:41:02 -05:00
Allen Byrne
46074defaa [svn-r26284] Add VIRTUAL layout to h5dump - still need a tools testfile created 2015-02-23 12:07:40 -05:00
Mohamad Chaarawi
88fb6b1374 [svn-r25531] remove use of C99 PRI that failed on windows in dtypes.c 
fix bugs where hid_t were assumed to be 32 bit ints or herr_t.
 2014-08-11 14:13:45 -05:00
Quincey Koziol
33ea1ada24 [svn-r25496] Description: 
Merge 64-bit ID changes from branch to trunk.  (Plus a few minor cleanups
that aren't on the branch)

Tested on:
    Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN
    (h5committested on branch already for a week)
 2014-07-30 15:55:14 -05:00
Dana Robinson
d01ee66666 [svn-r24937] Adds an H5free_memory() function to the library for use with 
functions that return library-allocated memory. The test and tool
code were modified to use this new function where it's appropriate.

Fixes HDFFV-7710, HDFFV-8519, and HDFFV-8551

Tested on:
    64-bit Windows 7 w/ VS2012
    32-bit LE linux w/ parallel and fortran (jam)
    32-bit LE linux w/ fortran and C++ (jam)
 2014-03-31 18:35:09 -05:00