Commit Graph

65 Commits

Author SHA1 Message Date
lrknox
25ec07450a Change copyright headers to replace url referring to file to be removed
and replace it with new url for COPYING file.

Fix 2 lines in java error test expected output file where messages
include line numbers changed by reducing the copyright header by 2
lines.
2017-04-14 11:54:16 -05:00
Quincey Koziol
101fa7af8e Cleanups and normalizations against incoming page_buffering changes. 2017-02-19 18:28:52 -08:00
Quincey Koziol
57afb68e46 Bring SWMR-related tools changes from revise_chunks to develop. 2016-12-11 11:25:08 -08:00
Quincey Koziol
83724bd787 [svn-r30113] Description:
Clean up warnings (from 2774 -> 1560, with my standard debug build)

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-06-28 16:53:48 -05:00
Allen Byrne
40cdbe0b8d [svn-r29274] HDFFV-9698: fix subsetting issues with h5dump 2016-03-04 15:41:12 -05:00
Allen Byrne
d0444d4f2b [svn-r29261] HDFFV-9241: Print fill value as "DEFAULT" instead of value 0 2016-03-03 10:27:48 -05:00
Allen Byrne
f0a7f5978e [svn-r29257] HDFFV-9705: h5dump should not print filters or allocation time info for VDS files 2016-03-03 08:56:44 -05:00
Larry Knox
b3426914a8 [svn-r28669] Changes to correct errors found with -ansi flag.
h5tools_dump.c
    Removed 3 lines commented out with //.
h5_vds-percival-unlim.c
    Changed C++-style comment to C-style comment.

Tested with h5committest.new.
2015-12-15 15:52:12 -05:00
Quincey Koziol
d3c6b4ad72 [svn-r27848] Description:
Clean up warnings and some normalization against trunk.

Tested:
    McaOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
2015-09-21 19:21:18 -05:00
Quincey Koziol
0695d6366a [svn-r27835] Description:
Sync w/trunk.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    (h5committest not required on this branch)
2015-09-20 21:18:45 -05:00
Dana Robinson
d90e4acfa7 [svn-r27801] Minor warning fixes in the tools.
Tested on: jam (too minor for h5committest)
2015-09-16 10:23:16 -05:00
Quincey Koziol
db8e289abe [svn-r27632] Description:
Revert changes to pass file pointer to selection serialize/deserialize
routines.  Also patch back in some changes that were merged out in the
previous merge w/trunk.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial
    (h5committest not required on this branch)
2015-08-31 16:58:15 -05:00
Quincey Koziol
2c91cbecc6 [svn-r27630] Description:
Bring in changes from the trunk, through r27628.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial
    (h5committest not required on this branch)
2015-08-31 15:14:57 -05:00
Dana Robinson
c226e58005 [svn-r27626] Various minor warning fixes before major SWMR and VDS merges.
gcc 4.9.2 was used to create the warning list

- implicit casts
- shadowed variables
- various enum issues
- other minor fixes (comments, unused macros, etc.)

Tested on: h5committest
2015-08-31 14:04:23 -05:00
Allen Byrne
78e128c544 [svn-r27195] Add h5dump cmake tests and files.
Add tools gen cmake files
move testfiles for pbits to subdir as well as vds

Tested: local linux
2015-06-12 16:29:20 -05:00
Allen Byrne
11efaf4ff7 [svn-r26798] Fix other storage layout whitespace 2015-04-13 15:47:03 -05:00
Allen Byrne
26e709edc6 [svn-r26794] Fix formatting for selection. Irregular reuses blocks and points for datasets however indentation after line breaks are an issue. 2015-04-13 15:15:00 -05:00
Neil Fortner
6a27582a44 [svn-r26781] Merge revisions 26305 through 26780 from trunk to vds branch.
Tested: ummon
2015-04-10 18:00:48 -05:00
Allen Byrne
e270981617 [svn-r26611] Remove complete section of VIRTUAL output. 2015-03-27 09:23:24 -05:00
Elena Pourmal
1180e6f96d [svn-r26570] Commented lineis that print extra "VIRTUAL" keyword and blank lines for demo on 3/25/2015. Allen will need to review it. 2015-03-24 23:08:59 -05:00
Elena Pourmal
dd0e7540b6 [svn-r26567] h5dump was nopt displaying source selection correctly due to a type; fixed. 2015-03-24 18:31:00 -05:00
Allen Byrne
66a9948e65 [svn-r26442] Removed blank line and fixed ALL output 2015-03-12 17:29:59 -05:00
Allen Byrne
4edde43ae5 [svn-r26440] Added new structure, removed ";", used static hyperslab arrays. 2015-03-12 16:22:48 -05:00
Allen Byrne
92d7b82d61 [svn-r26418] Fix initial indent for selection_all 2015-03-10 15:53:57 -05:00
Allen Byrne
9cdf806eec [svn-r26383] Add MAPPING to VDS output 2015-03-06 12:53:56 -05:00
Allen Byrne
1aa5cd4fa5 [svn-r26353] Add VDS selection defines for ALL and NONE 2015-03-04 09:08:58 -05:00
Allen Byrne
f1c4d0ff3f [svn-r26352] Update h5dump to latest BNF - reg vs irreg hyperslabs. 2015-03-04 08:34:24 -05:00
Allen Byrne
45df14138d [svn-r26318] Update virtual layout to latest changes 2015-02-26 10:59:15 -05:00
Allen Byrne
aad4250bd6 [svn-r26305] convert dump_dcpl to use switch statement
Add default case
refactor out start ctx and end ctx
Tested: local linux
2015-02-25 15:20:31 -05:00
Elena Pourmal
99a3f4d8d4 [svn-r26297] Changed example and h5dump according to suggestions at today's code review VDS-176.
BNF has been updated too. Now h5dump displays VDS like this:

HDF5 "vds.h5" {
GROUP "/" {
   DATASET "VDS" {
      DATATYPE  H5T_STD_I32LE
      DATASPACE  SIMPLE { ( 4, 6 ) / ( 4, 6 ) }
      STORAGE_LAYOUT {
         VIRTUAL {
             HYPERSLAB { (0,0)-(0,5) };
             a.h5;
             A;
             ALL;
             HYPERSLAB { (1,0)-(1,5) };
             b.h5;
             B;
             ALL;
             HYPERSLAB { (2,0)-(2,5) };
             c.h5;
             C;
             ALL;
            }
         }
      }
      FILTERS {
.......
I just commented the code with "EIP" and didn't delete to simplify the review with Allen tomorrow.

Tested on jam
2015-02-24 23:19:41 -05:00
Allen Byrne
3f72ec11cd [svn-r26295] add space before end bracket of selection 2015-02-24 15:39:08 -05:00
Allen Byrne
80e77e7d77 [svn-r26290] Add H5S prefix to selection name 2015-02-23 16:52:03 -05:00
Allen Byrne
bc888966a9 [svn-r26288] remove extra set of brackets 2015-02-23 15:30:53 -05:00
Allen Byrne
b1251c915e [svn-r26287] Rename point and block str functions generically.
Add info arg to print virtual selection function.
2015-02-23 15:23:56 -05:00
Allen Byrne
a0ead57cad [svn-r26286] Print selection types - no values 2015-02-23 14:19:19 -05:00
Allen Byrne
cd9b96a887 [svn-r26285] add virtual mapping output blank selections but actual file and dataset names. 2015-02-23 13:41:02 -05:00
Allen Byrne
46074defaa [svn-r26284] Add VIRTUAL layout to h5dump - still need a tools testfile created 2015-02-23 12:07:40 -05:00
Mohamad Chaarawi
88fb6b1374 [svn-r25531] remove use of C99 PRI that failed on windows in dtypes.c
fix bugs where hid_t were assumed to be 32 bit ints or herr_t.
2014-08-11 14:13:45 -05:00
Quincey Koziol
33ea1ada24 [svn-r25496] Description:
Merge 64-bit ID changes from branch to trunk.  (Plus a few minor cleanups
that aren't on the branch)

Tested on:
    Mac OSX/64 10.9.4 (amazon) w/C++ & FORTRAN
    (h5committested on branch already for a week)
2014-07-30 15:55:14 -05:00
Dana Robinson
d01ee66666 [svn-r24937] Adds an H5free_memory() function to the library for use with
functions that return library-allocated memory. The test and tool
code were modified to use this new function where it's appropriate.

Fixes HDFFV-7710, HDFFV-8519, and HDFFV-8551

Tested on:
    64-bit Windows 7 w/ VS2012
    32-bit LE linux w/ parallel and fortran (jam)
    32-bit LE linux w/ fortran and C++ (jam)
2014-03-31 18:35:09 -05:00
Larry Knox
6b54dac504 [svn-r24115] Reduce warnings for conversions of different widths.
h5committested on jam, ostrich, koala, and platypus.
2013-09-06 17:48:28 -05:00
Quincey Koziol
482a9c28e7 [svn-r24030] Description:
Clean up more compiler warnings.

Tested on:
    Mac OSX/64 10.8.4 (amazon) w/gcc, C++ & FORTRAN
    (too minor to require h5committest)
2013-08-19 17:13:15 -05:00
Albert Cheng
c2750822ff [svn-r23825] Bug HDFFV-8469: C++ comments in C code.
Found and removed two more "//" comments.

Tested: in Koala by
$ env CFLAGS="-ansi" ../hdf5/bin/buildhdf5 -fortran -cxx -config # enable fortran and cxx, configure only
$ make AM_CFLAGS=-ansi # compile all source file by setting HDF5 build CFLAGS as "-ansi" only
2013-06-26 01:25:44 -05:00
Allen Byrne
f0a9b781f3 [svn-r23740] HDFFV-8447: subsetting broke data output file option.
Reviewed in H5T-59, tested local linux
2013-06-07 13:39:54 -05:00
Quincey Koziol
d38fe20df6 [svn-r23695] Description:
Clean up warnings in H5Tconv.c (down to _only_ 9000 lines of output now!)

    Merge changes from Coverity branch back to trunk:

r20684:
Fix for coverity bug #1721 which was due to the fix for coverity bug #943.

r20685:
Use HDstrncpy. --gh

r20761:
Purpose: Fix valgrind issues

Description:
Free image_data and data as appropriate in test_image.

r20762:
Purpose: Fix coverity issue 600

Description:
Add check for return value of H5O_close in H5Ocopy.  Also cleaned up various
warnings.

r20763:
Purpose: Fix valgrind issues with h5stat

Description:
Modified h5stat to free "iter" before exit, and free "hand" before exit if
parse_command_line exits directly.

r20764:
fixed coverity issues:
69, 327, 614, 684, 685, 696, 697, 1681, 967, 826, 660, 80

r20765:
Fixed coverity bug 668

Pulled x * y * z multiply out of malloc operand into a separate n_elements variable to quiet integer overflow warning.

No actual integer overflow tests are performed since it's just a test program but I did add a check that n_elements is >= 1.

I also changed an error condition from doing its own close and returning -1 to "goto out;" like the rest of the program.

r20766:
Fixed coverity bug 667

Pulled x * y * z multiply out of malloc operand into a separate n_elements variable to quiet integer overflow warning.

No actual integer overflow tests are performed since it's just a test program.


Tested on:
    Mac OSX/64 10.8.3 (amazon) w/C++ & FORTRAN
    (h5committest upcoming)
2013-05-11 10:59:48 -05:00
Allen Byrne
4ae0c873e0 [svn-r23446] HDFFV-8344, HDFFV-8346: merge from 1.8 branch 2013-03-25 12:35:39 -05:00
Allen Byrne
aff5c20a6a [svn-r23305] HDFFV-8257: szip still used even if headers are not found. Change configure to test the result of the CHECK HEADERS call before checking for the library.
Tested: local linux, h5committest
2013-02-18 15:56:21 -05:00
Allen Byrne
ff421d9424 [svn-r23190] HDFFV-8285: Add suppress ddl option.
Tested: local linux
2013-01-22 15:43:12 -05:00
Quincey Koziol
b9d042d2d2 [svn-r22998] Description:
Clean up warnings and bring changes from Coverity branch back to trunk:

r20451:
Fixed coverity 810

r20454:
Purpose: Fix coverity issue 816

Description: Modified various file drivers to always check the return value from
H5P_get_driver_info.

r20455:
Purpose: Cleanup fix for coverity issue 816

Description: Removed redundant check for "fa" in H5FD_core_open.


Tested on:
    Mac OSX/64 10.8.2 (amazon) w/debug
    (Too minor to require h5committest)
2012-11-01 11:01:37 -05:00
Allen Byrne
dd27fe612c [svn-r22602] 2012-07-25 17:17:48 -05:00