Commit Graph

200 Commits

Author SHA1 Message Date
Allen Byrne
3186b8227c Fix javadoc and java warnings (#1010) 2021-09-17 11:00:32 -05:00
Allen Byrne
b19234c31a Correct dataset close in java test #919 (#920) 2021-08-19 13:19:15 -05:00
Allen Byrne
3bbc4f0df4 Hdf5 1 12 merge cmake ninja and java refs (#698)
* OESS-98 fix tools test for plugins

* sync fork

* Merge of changes from dev

* Move problem option to bottom of the list until fixed

* HDFFV-11106 - fix parsing optional args

* HDFFV-11106 add note

* grammer fix

* Whitespace after clang formatting

* Undo format version 11 changes

* Update check to working version

* Merge workflow and minor changes from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge serval small changes from dev

* fix typo

* Minor non-space formatting changes

* GH #386 copyright corrections for java folder

* revert because logic requires false return

* Merges from develop

#358 patches from vtk
#361 fix header guard spelling

* Remove case statement for H5I_EVENTSET

* Correct call with versioning

* Remove tabs

* Double underscore change

* Merges from develop

#340 clang -Wformat-security warnings
#360 Fixed uninitialized warnings
Remove more underscores from header guards

* Merge #380 from develop

* Correct date entry

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

* Some Javadoc warning fixes

* Committing clang-format changes

* Updated javadoc fixes

* HDFFV-11228/9 merges from develop

* remove obsolete debug comment

* Fix conflict

* HDFFV-11229 merge changes from develop

* HDFFV-11229 merge second compare from develop

* HDFFV-11229 fix reference file

* HDFFV-11229 update autotools test script for two ref files

* HDFFV-11229 merge dev changes for long double display in tools

* Committing clang-format changes

* Update with changes from develop

* Add "option" command for clang options

* Rework CMake add_custom to use the BYPRODUCTS argument

Update pkgconfig scripts for parallel builds.
Fix install COPYING file reference.
Remove unused round defines.
Change CMake default setting of BUILD_CPP to off.

* Whitespace changes

* Rework CMake add_custom to use the BYPRODUCTS argument

* Revert CMake configure checks for round defines

* With VS 2015 minimum strdup is supported

* Doxygen comments merged from develop

* doxygen build updates

* Correct version string for map functions

* TRILAB-227 and tools debug merge from develop

* TRILAB-227 Enable test

* Quote subset args

* Use MATCHES in compiler id compare, merge from dev

* Revert test enable

* Add file to list

* doxygen version errors

* if blocks needed for build modes

* Update list of test platforms

* Issue #669 remove version from pkgcfg filename

* remove version from h5cc script

* Merge CMake and java refs from dev

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-05-29 15:30:27 -05:00
Larry Knox
ed86f4aaf4 Update version to 1.12.2-1.
Update so numbers according to compatibility rules for 1.12.1 release.
2021-05-17 23:29:51 -05:00
Allen Byrne
7a2b7faa39 1 12 merge CMake flag groups and tools long double changes from develop (#523)
* OESS-98 fix tools test for plugins

* sync fork

* Merge of changes from dev

* Move problem option to bottom of the list until fixed

* HDFFV-11106 - fix parsing optional args

* HDFFV-11106 add note

* grammer fix

* Whitespace after clang formatting

* Undo format version 11 changes

* Update check to working version

* Merge workflow and minor changes from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge serval small changes from dev

* fix typo

* Minor non-space formatting changes

* GH #386 copyright corrections for java folder

* revert because logic requires false return

* Merges from develop

#358 patches from vtk
#361 fix header guard spelling

* Remove case statement for H5I_EVENTSET

* Correct call with versioning

* Remove tabs

* Double underscore change

* Merges from develop

#340 clang -Wformat-security warnings
#360 Fixed uninitialized warnings
Remove more underscores from header guards

* Merge #380 from develop

* Correct date entry

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

* Some Javadoc warning fixes

* Committing clang-format changes

* Updated javadoc fixes

* HDFFV-11228/9 merges from develop

* remove obsolete debug comment

* Fix conflict

* HDFFV-11229 merge changes from develop

* HDFFV-11229 merge second compare from develop

* HDFFV-11229 fix reference file

* HDFFV-11229 update autotools test script for two ref files

* HDFFV-11229 merge dev changes for long double display in tools

* Committing clang-format changes

* Update with changes from develop

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-04-19 07:53:45 -05:00
Allen Byrne
579b266e65 1 12 JNI export references and java updates (#464)
* OESS-98 fix tools test for plugins

* sync fork

* Merge of changes from dev

* Move problem option to bottom of the list until fixed

* HDFFV-11106 - fix parsing optional args

* HDFFV-11106 add note

* grammer fix

* Whitespace after clang formatting

* Undo format version 11 changes

* Update check to working version

* Merge workflow and minor changes from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge serval small changes from dev

* fix typo

* Minor non-space formatting changes

* GH #386 copyright corrections for java folder

* revert because logic requires false return

* Merges from develop

#358 patches from vtk
#361 fix header guard spelling

* Remove case statement for H5I_EVENTSET

* Correct call with versioning

* Remove tabs

* Double underscore change

* Merges from develop

#340 clang -Wformat-security warnings
#360 Fixed uninitialized warnings
Remove more underscores from header guards

* Merge #380 from develop

* Correct date entry

* Split format source and commit changes on repo push

* remove pre-split setting

* Change windows TS to use older VS.

* HDFFV-11212 JNI export util and Javadoc

* Suggested review changes

* Another change found

* Committing clang-format changes

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
2021-03-12 07:48:16 -06:00
Allen Byrne
0f219cafea 1 12 merges from develop (#412)
* OESS-98 fix tools test for plugins

* sync fork

* Merge of changes from dev

* Move problem option to bottom of the list until fixed

* HDFFV-11106 - fix parsing optional args

* HDFFV-11106 add note

* grammer fix

* Whitespace after clang formatting

* Undo format version 11 changes

* Update check to working version

* Merge workflow and minor changes from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge serval small changes from dev

* fix typo

* Minor non-space formatting changes

* GH #386 copyright corrections for java folder

* revert because logic requires false return

* Merges from develop

#358 patches from vtk
#361 fix header guard spelling

* Remove case statement for H5I_EVENTSET

* Correct call with versioning

* Remove tabs

* Double underscore change
2021-03-03 07:08:37 -06:00
Allen Byrne
498a6de935 1 12 merge java copyright header changes (#391)
* OESS-98 fix tools test for plugins

* sync fork

* Merge of changes from dev

* Move problem option to bottom of the list until fixed

* HDFFV-11106 - fix parsing optional args

* HDFFV-11106 add note

* grammer fix

* Whitespace after clang formatting

* Undo format version 11 changes

* Update check to working version

* Merge workflow and minor changes from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge serval small changes from dev

* fix typo

* Minor non-space formatting changes

* GH #386 copyright corrections for java folder

* revert because logic requires false return
2021-03-01 14:07:44 -06:00
Larry Knox
8d4a9d589b Update URL in source file Copyright headers for web copy of COPYING
file - files not in src or test.
2021-02-20 08:08:39 -06:00
Dana Robinson
5d0be1b196 Manual sync with develop (#95)
Brings all features from develop. Note that RELEASE.txt has not been
updated (will be done in a future PR).
2020-11-17 07:47:52 -06:00
Allen Byrne
46bc76ab63 Correct TARGET variable and CMake config file location 2020-11-12 10:50:00 -06:00
Allen Byrne
7416cd2598 HDFFV-10868 merge from develop 2020-10-28 09:25:26 -05:00
Dana Robinson
1ae6daaa80 Sync with develop 2020-08-01 09:18:18 -07:00
Larry Knox
1d1cba787f Change load path in libhdf5_java.dylib to unversioned libhdf5.dylib for
junit tests on Macs.
2020-07-07 11:03:15 -05:00
Larry Knox
f9c38c6253 Merge pull request #2667 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit '32c483cb86031962a09ecdb49dcb331d28dddee9':
  Copy lib files for junit.sh to temporary subdirectory of <build directory>/java/test instead of to the prefix/lib directory.  Fix for HDFFV-11063.
2020-07-07 11:02:21 -05:00
Larry Knox
8171ef3c88 Merge pull request #2670 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:develop to develop
* commit 'fc69de0e8ae30e80c1c3c542b156226a75444525':
  Lib files needed are now copied to a subdirectory in the java/test directory, and on Macs the loader path for libhdf5.xxxs.so is changed in the temporary copy of libhdf5_java.dylib. Fix for HDFFV-11063
2020-07-06 12:34:51 -05:00
Allen Byrne
2a3d394f7c Whitespace cleanup 2020-05-12 15:59:59 -05:00
Allen Byrne
e0183056d5 Add github actions and cleanup java whitespace 2020-05-06 11:19:50 -05:00
Allen Byrne
9ed096fb39 Merge changes from develop mostly cmake 3.12 minimum version 2020-02-23 11:55:47 -06:00
Allen Byrne
21f11e240b HDFFV-10996 merge java vol tests from develop 2020-02-04 11:43:45 -06:00
Jordan Henderson
edec1f017d Introduce new H5VL _by_value routines 2020-01-29 16:59:41 -06:00
Larry Knox
3ecbb767c3 Update version to 1.12.1-snap0 for hdf5_1_12 branch. 2020-01-28 15:55:05 -06:00
Allen Byrne
6bae11bb5b Improved CMake options for tests 2020-01-19 07:53:46 -06:00
Dana Robinson
2b1709f6ff Squashed commit of the token_refactoring branch: 2020-01-18 20:02:16 -08:00
Allen Byrne
06f3c95c6e Merge tools changes from develop 2020-01-13 11:35:40 -06:00
Allen Byrne
483f862a01 Fix compile error and add ref destroy to Java test 2019-12-09 15:44:38 -06:00
Allen Byrne
310b42e35a HDFFV-10876 Merge from develop 2019-12-09 15:44:38 -06:00
Jordan Henderson
f3f67a5645 Fix various Java issues when deprecated symbols are disabled 2019-10-10 16:03:34 -05:00
Larry Knox
e7dbf81191 Set versions in initial hdf5_1_12 revision. 2019-09-25 15:57:22 -05:00
Allen Byrne
cf9eff93e0 Remove obsolete symbol 2019-09-20 09:30:36 -05:00
Allen Byrne
aa8c7b31d7 small syntax changes 2019-09-19 16:32:40 -05:00
Allen Byrne
b477f9bcc7 HDFFV-10901 add missing config options 2019-09-13 11:34:00 -05:00
Allen Byrne
dcab85c83b Add back missing java implementation 2019-09-05 14:35:33 -05:00
Allen Byrne
935f27c1b8 HDFFV-10887 Implement requested functions 2019-08-19 11:58:52 -05:00
Larry Knox
c234479258 Update junit.sh.in to copy lib files to $prefix/lib.
Correct checking for s3 and hdfs options.
2019-08-02 09:58:48 -05:00
Allen Byrne
44e2ddac97 Merge cleanup mostly whitespace 2019-07-30 12:39:20 -05:00
Allen Byrne
517cadac26 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'f97e11e7635a0cd8728d4604ca5dceb3925ba44c':
  Update comment and check for strtoumax.
  Modify CMakeLists.txt file for renamed h5tools_test_utils files.
  Add HD to string functions. Switched strtoul to strtoumax in H5FDs3comms.c. Removed unused functions and variables in s3 and hdfs TestH5Pfapl*.java. Update Copyright headers.
  Squashed commit of the following:
2019-07-29 16:10:45 -05:00
Allen Byrne
da2ec6163d Update libvers usage 2019-07-28 14:41:52 -05:00
Larry Knox
094f14ef38 Add HD to string functions.
Switched strtoul to strtoumax in H5FDs3comms.c.
Removed unused functions and variables in s3 and hdfs TestH5Pfapl*.java.
Update Copyright headers.
2019-07-26 11:56:03 -05:00
Larry Knox
8008294578 Squashed commit of the following:
Merge changes from update_merged_S3_HDFS branch into develop.

commit d5034315aea88629929ac0c9c59ebfafd5f21a31
Merge: 9c48823 d3fdcd8
Author: Larry Knox <lrknox@hdfgroup.org>
Date:   Thu Jul 25 08:24:53 2019 -0500

    Merge branch 'develop' into update_merged_S3_HDFS
2019-07-25 11:47:12 -05:00
Allen Byrne
fbc06ff9b8 Use generator expr to get correct name 2019-07-22 16:23:38 -05:00
Allen Byrne
4d3f52ac97 Correct java load library name access 2019-07-18 13:03:07 -05:00
Allen Byrne
5b97d67d43 CMake generator expr cannot be used in get_property cmd 2019-07-18 11:37:34 -05:00
Allen Byrne
7ba562a820 HDFFV-10845 fix configure check and PATHs 2019-07-17 11:58:03 -05:00
Allen Byrne
8583d608ef Correct test use of library name 2019-07-08 15:10:12 -05:00
Allen Byrne
3dd7137430 HDFFV-10581 remove special name checking 2019-07-08 13:46:25 -05:00
Dana Robinson
f4015bed9e Updated the Java attribute test so that attribute access
property lists are created and used correctly.
2019-06-24 14:33:54 -07:00
hdftest
1cec61a775 Snapshot version 1.11 release 5.
Update version to 1.11.6.
2019-05-02 10:42:53 -05:00
Allen Byrne
6bf109d1ae Fix java for new H5Fget_info function 2019-04-15 11:19:29 -05:00
Quincey Koziol
d7e1464058 Add C++, Java, and FORTRAN wrappers and tests for H5Fget_fileno 2019-04-13 22:58:16 -05:00