Commit Graph

636 Commits

Author SHA1 Message Date
David Young
0108072f7a Revert "Make a squash commit of 'Quiet some warnings by adjusting warnings level and fixing some code.' (commit 5c911d8baf)" 2019-11-27 11:26:02 -06:00
David Young
8fb9fb5d4d Revert "Oops, remove more C99 designated initializers for VS 2010 compatibility."
This reverts commit f907b511d0.
2019-11-27 11:16:52 -06:00
David Young
f907b511d0 Oops, remove more C99 designated initializers for VS 2010 compatibility. 2019-11-25 17:30:08 -06:00
David Young
587758e8c6 Initialize a variable before its first use. 2019-11-13 11:23:12 -06:00
Jerome Soumagne
c13078a0ed Make wrappers, tests and tools use H5Treclaim() instead of H5Dvlen_reclaim() 2019-10-08 14:30:24 -05:00
Allen Byrne
7ba562a820 HDFFV-10845 fix configure check and PATHs 2019-07-17 11:58:03 -05:00
Quincey Koziol
73df02f13c Merge branch 'develop' into feature/update_gcc_flags 2019-07-09 22:17:22 -05:00
Allen Byrne
ae0c16d1f2 HDFFV-10581 fix locations for static pdb files 2019-07-08 12:21:11 -05:00
Quincey Koziol
3b594992d6 Add support for GCC9, update warnhist script, and clean up warnings. 2019-07-02 23:43:45 -05:00
Quincey Koziol
d5130bb573 Updated configure & CMake compiler flags for GCC 8.x, along with corresponding
changes to warnhist script (and some extra improvements for condensing C++
and Java warnings), and fixed a bunch of warnings.
2019-06-28 09:10:43 -05:00
Quincey Koziol
1ccbdfee58 Add support for GCC 7.x warnings, update warnhist script to account for them,
clean up warnings.
2019-06-21 10:05:34 -05:00
Allen Byrne
c24f11070a Add H5_HLDLL prefix for windows link 2019-06-20 08:54:49 -05:00
Allen Byrne
e7f16c6f2c HDFFV-10805 Add option to only build shared targets
HDFFV-10805 Add ONLY_SHARED_LIBS option and prefer shared over static
HDFFV-10803 Update FindSZIP.cmake find module
Remove unneeded modules and update java modules
2019-06-18 07:46:25 -05:00
Dana Robinson
62b92ddf40 Makes the installed header files the same between the autotools
and CMake.

* CMake will no longer install private generated headers and tools
  library headers.
* Several empty public header files (which represent internal packages)
  were removed. These were only installed by CMake.
* Autotools installs will install H5FDwindows.h.

Fixes HDFFV-10614.
2018-10-26 20:44:29 -07:00
Allen Byrne
27af9a7922 HD prefix and whitespace 2018-08-28 10:54:54 -05:00
Dana Robinson
dec2f588ac Merge pull request #1043 in HDFFV/hdf5 from ~DEROBINS/hdf5_der:h5do_direct_chunk_hl_to_src to develop
* commit '1da9c5545c013ebc540ba3044810889d4acfa5be':
  Restored some unused #defines to the deprecated section of H5Dpublic.h.
  Added deprecated symbol wrappers for the H5DOwrite/read_chunk wrappers.
  Updated commenting in the H5DO compat test.
  Stripped out most of the duplicated functionality in the H5DO compat test.
  * Added H5DO compatibility functions. * Changed the offset copy to use an array on the stack. * Yanked some unused #defines.
  * Fixed the error tests * Moved common functionality into helper functions
  Normalize with trunk prior to update merge
  Fixed a warning.
  Finished move of H5DOread/write_chunk calls to H5D.
  First stage of moving H5DOread/write_chunk() to src/ and making them H5D calls. * Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*. * Moved the hl/test/test_dset_opt test to test/ and renamed to   direct_chunk. * Moved the hl/test/dectris_hl_perf test to tools/test/perform   and renamed to direct_write_perf. * Updated autotools and CMake files.
2018-05-31 18:14:24 -05:00
Vailin Choi
be2fc7dcd1 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit '2b0fb7e3f1f7da5b23d430702493ed4fb7f87166': (21 commits)
  HDFFV-9739 only executes H5E tests in production
  Remove link flag from compile command
  fix typo
  Add release note
  Correct attribute location
  HDFFV-9739 fix  copy testfiles command
  HDFFV-9739 remove obsolete test files
  HDFFV-9739 dup test file for concurrent tests
  HDFFV-9739 Fix autotools script
  HDFFV-9739 Change autotools test scripts
  Fix typo
  HDFFV-9739 Update test reference
  Update current windows test machines
  HDFFV-9739 Grab err number before API call
  HDFFV-9739 Add release note
  Adjust test names for concurrent tests
  Fix soversion
  HDFFV-9739 Fix copy name
  HDFFV-9739 factor out tests into separate JUnit
  Updated the threadsafety test to use error macros instead of asserts.
  ...
2018-05-23 14:27:05 -05:00
Dana Robinson
0e584c7af2 Merge branch 'develop' into h5do_direct_chunk_hl_to_src 2018-05-14 17:45:23 -07:00
Vailin Choi
b178d80be0 Changes made based on feedback from pull request #1039. 2018-05-14 12:26:48 -05:00
Vailin Choi
ea66ac1e67 Merging in latest from upstream (HDFFV/hdf5:refs/heads/develop)
* commit 'dcc66a4f157ace0858b788228550f3e104df3242': (35 commits)
  GGC requires attribute before function
  Correct COMPILE defs usage
  Add missing module_dir property
  Text cleanup
  Correct sentence punctuation.
  Add release note.
  Use set_property for MT flag
  Correct command usage
  Remove APPEND
  Fix typo
  Add missing test lib
  add missing folder to path
  Fix another command revert
  Missed a command revert
  Revert to old style for LINK_FLAGS gen expr not working
  LINK_FLAGS must be separate property sets
  Fix link flags syntax
  Revert refactor link flags
  refactor link flags to interface
  Refactor link flags
  ...
2018-05-14 11:20:03 -05:00
Allen Byrne
37c27afde0 Fix MPI on Windows by adding MPI include folder 2018-05-09 14:29:44 -05:00
Dana Robinson
1c11ddec6d Added deprecated symbol wrappers for the H5DOwrite/read_chunk
wrappers.
2018-05-04 16:43:06 -07:00
Dana Robinson
1fa0c5a4b5 * Added H5DO compatibility functions.
* Changed the offset copy to use an array on the stack.
* Yanked some unused #defines.
2018-05-04 09:01:54 -07:00
Dana Robinson
64e13ca220 Merge branch 'develop' into h5do_direct_chunk_hl_to_src 2018-04-30 15:22:09 -07:00
Dana Robinson
09b1106e39 First stage of moving H5DOread/write_chunk() to src/ and making
them H5D calls.
* Moved H5DOread/write_chunk() to H5Dio.c and renamed to H5D*.
* Moved the hl/test/test_dset_opt test to test/ and renamed to
  direct_chunk.
* Moved the hl/test/dectris_hl_perf test to tools/test/perform
  and renamed to direct_write_perf.
* Updated autotools and CMake files.
2018-04-30 07:52:07 -07:00
Allen Byrne
2347bffaa2 TRILABS-19 remove add_defintions and use generator expressions 2018-04-26 16:41:04 -05:00
Vailin Choi
e6bc326ec0 Fix for HDFFV-10180 Performance issues with H5Oget_info. 2018-04-24 15:10:13 -05:00
Allen Byrne
6c82c49dd5 TRILABS-20 set a compiler name on all project commands 2018-04-20 10:11:55 -05:00
Allen Byrne
46f2a2a432 TRILABS-19 Initial conversion of include_directories to targets 2018-04-17 15:57:58 -05:00
Allen Byrne
db3d744f25 HDFFV-10444 fix soversion numbers for libraries 2018-04-10 08:55:17 -05:00
Allen Byrne
adfffd04b1 Correct name of h5 hl compile script 2018-03-28 12:25:42 -05:00
Allen Byrne
24c62ba7fe Change CMake min to 3.10 2018-03-09 12:32:06 -06:00
Allen Byrne
13f5388149 HDFFV-4359 Add HL C++ and fix install parameters 2018-03-08 16:39:35 -06:00
Allen Byrne
3712738877 HDFFV-4359 Add C,HL,CXX files 2018-03-08 15:54:40 -06:00
Allen Byrne
b36bad53d9 Inc CMake min, Add new tests, rework test CMake files 2018-02-27 12:57:07 -06:00
Allen Byrne
732074d47e Add library INTERFACE and MPI to tools 2017-12-28 16:30:51 -06:00
Vailin Choi
bacb45b38a Modifications based on pull request review.
Made couple changes based on the review comments.
2017-04-26 14:00:34 -05:00
Vailin Choi
cb8e82a53d Incorporate patch from GE Healthcare (HDFFV-9934)
This is the same patch that had already been integrated to 1.8 branch (pull request #387).
Tested on moohan, ostrich, platypus, emu, osx1010test, quail, kituo, mayll.
2017-04-25 18:08:53 -05:00
Larry Knox
89fbe00dec Merge pull request #426 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10 to hdf5_1_10
* commit '54957d37f5aa73912763dbb6e308555e863c43f4':
  Commit copyright header change for src/H5PLpkg.c which was added after running script to make changes.
  Add new files in release_docs to MANIFEST. Cimmit changes to Makefile.in(s) and H5PL.c that resulted from running autogen.sh.
  Merge pull request #407 in HDFFV/hdf5 from ~LRKNOX/hdf5_lrk:hdf5_1_10_1 to hdf5_1_10_1
  Change copyright headers to replace url referring to file to be removed and replace it with new url for COPYING file.
2017-04-25 16:05:36 -05:00
Allen Byrne
d1292691c4 HDFFV-9875 enable static pdb and cleanup exports 2017-02-03 12:41:30 -06:00
Allen Byrne
177c050891 HDFFV-9875 Fix target exports and add static tools pdb files 2017-02-02 12:09:10 -06:00
Allen Byrne
e1bcae8a6a Update cmake min version and cmake command convention 2017-01-10 17:10:03 -06:00
Binh-Minh Ribler
14e308b2e6 Description:
- Removed calls to H5Tget_native_type in the PT code. The application would
    need to do that if desired.
    - Added Abhi's program to tests to verify the fix.
    - This fix might have fixed HDFFV-9927, HDFFV-9042, and the issue reported
      by Barbara Jones from Ametek as well.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (jelly)
    Darwin (osx1010test)
2016-10-20 14:07:45 -05:00
Allen Byrne
3ee36553b9 Add support for namespace and add tools to binaries config 2016-10-14 11:22:22 -05:00
Vailin Choi
197b29ced6 [svn-r30289] Fix for HDFFV-9960 H5DOappend without append callback.
This is the second part of the fix--see crucible review HDF5-383.
Tested on mayll, platypus, osx1010test, emu, kituo, kite, quail, moohan, ostrich.
2016-08-14 18:02:49 -05:00
Quincey Koziol
f40381b0ea [svn-r30285] Description:
More warning cleanups, bringing the build down to 25 unique types of
warnings, with 550 warnings in 122 files (down from 28, 770, and 134).

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-08-13 04:23:53 -05:00
Vailin Choi
4d358ef0af [svn-r30262] Fix for HDFFV-9960: H5DOappend will not fail if a dataset has no append callback registered.
Tested on mayll, platypus, osx1010test, emu, moohan, kituo, ostrich, kite, quail.
2016-08-05 15:13:54 -05:00
Allen Byrne
74f3326a67 [svn-r29862] Convert source list names from *_SRCS to *_SOURCES.
Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR.
2016-05-04 10:06:05 -05:00
Quincey Koziol
2e3e3f9cd3 [svn-r29857] Description:
Bring H5LD* routines from revise_chunks branch to trunk.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-05-03 01:27:55 -05:00
Quincey Koziol
a6ce3d4e45 [svn-r29850] Description:
Bring H5DOappend(), H5P[s|g]et_object_flush_cb, and H5P[s|g]et_append_flush
from revise_chunks branch to trunk.  Brings along updated metadata cache
entry tagging, and the internal object flush routine.

Tested on:
    MacOSX/64 10.11.4 (amazon) w/serial, parallel & production
    (h5committest forthcoming)
2016-05-01 05:24:56 -05:00