Commit Graph

385 Commits

Author SHA1 Message Date
Binh-Minh Ribler
565aa10d8d Purpose: Add more tests
Description:
    Added more tests for the new constructors that replaced openXxxType()
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2017-01-03 07:53:54 -06:00
Binh-Minh Ribler
cd3bd5576f Purpose: Add new wrappers
Description:
    Added wrappers H5Location::exists() for H5Lexists.
    Added wrapper H5Object::objVersion() to return the header version
        of an HDF5 object.
    Added new class LinkAccPropList to be used by H5Location::exists()
    Added new exception: ObjHeaderIException for H5Object::objVersion()
    Rearranged source files in Makefile.am
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-12-28 08:44:01 -06:00
Binh-Minh Ribler
798cdad29a Purpose: Improvement for HDFFV-10004
Description:
    When adding wrappers for H5Lexists, a new class, LinkAccPropList, was
    added to the C++ API, triggered complicated circular dependencies.  Thus,
    some improvement was made to resolve the problems.
    - Replaced existing functions openXxxType with individual type constructors
      + Added individual XxxType constructors to replace the existing functions
        openXxxType because it's rather awkward to use these functions.
      + Moved openXxxType from H5Location back to CommonFG
      + Put back CommonFG as a baseclass of Group for openXxxType functions.
      + This replacement should improve usability and prevent the problem of
        circular dependencies.
    - Removed overloaded constructor that takes an Attribute when there is
        already one that takes H5Location because Attribute inherits from
        H5Location now.
Platforms tested:
    Linux/32 2.6 (jam)
    Darwin (osx1010test)
    Linux/64 (platypus)
2016-12-19 00:34:18 -06:00
Quincey Koziol
64a339183f Bring SWMR support in to the main development branch. (Finally!) More tests
and the tool and API wrappers will be coming in over the weekend.
2016-12-02 08:07:04 -08:00
Binh-Minh Ribler
a903cbafa8 Description:
Removed obsolet macros from C++ API:
	H5_NO_NAMESPACE, H5_NO_STD, __cplusplus
    Leave OLD_HEADER_FILENAME because iostream.h might still be in use,
    until further checking is done.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
    Jelly
2016-10-19 15:50:17 -05:00
Binh-Minh Ribler
3c0afffb9d Purpose: Fix bug HDFFR-9920 cont.
Description:
    Added new test file titerate.cpp.
2016-10-11 00:14:25 -05:00
Binh-Minh Ribler
7ef33fa7b3 Purpose: Fix bug HDFFR-9920 cont.
Description:
    Adding user's test revealed a flaw in the fix.
    Moved CommonFG's functions in Group to H5Location, so that they
    could be called by objects that can be used to specify a location
    Also, rearranged many "#include" header files to resolve conflicts.

Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-09-21 14:53:17 -05:00
Binh-Minh Ribler
478f771243 Purpose: Code cleanup
Description:
    - Used FP_EPSILON in comparing float values to verify read data
    - Casted C macro to fix mismatched types in verify_val calls
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-09-01 22:14:22 -05:00
Allen Byrne
9842d2ae5f Add VFD name to test folder 2016-09-01 11:08:18 -05:00
Binh-Minh Ribler
c78f1ec882 [svn-r30309] Purpose: Fix bug HDFFR-9920
Description:
    Rearranged the classes to model the relationship of HDF5 objects more
    accurately.  The changes included:
    - moved CommonFG's methods to Group
    - removed CommonFG from Group's base class list
    - removed CommonFG from H5File's base class list and changed
      "public H5Location" to "public Group" in the base class list
    - CommonFG became unused
    - result of the modified partial class diagram:

                                IdComponent
                                     |
                                H5Location
                                /
                        H5Object
                           |
                        /  /  \
                DadaType Group DataSet
                          |
                        H5File
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-08-19 23:34:26 -05:00
Allen Byrne
e55844b752 [svn-r30237] HDFFV-9939: Change cmake commands to reduce POST_BUILD custom commands. Fixes possible overruns on windows command lines. 2016-08-01 12:35:00 -05:00
Quincey Koziol
d3b724f86a [svn-r30201] Description:
Switch test framework to dynamically allocate the testing array, and
expand the length of the description field.

Tested on:
    MacOSX/64 10.11.5 (amazon) w/serial & parallel
    (h5committest forthcoming)
2016-07-18 17:36:44 -05:00
Allen Byrne
74f3326a67 [svn-r29862] Convert source list names from *_SRCS to *_SOURCES.
Add/convert most tools to use new HDF5_TOOLS_DIR instead of HDF5_TOOLS_SRC_DIR CMake VAR.
2016-05-04 10:06:05 -05:00
Binh-Minh Ribler
0d5910683d [svn-r29786] Purpose: Add new wrapper
Description:
    Added wrapper for H5Tset_nbit: void DSetCreatPropList::setNbit() const.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-25 01:09:46 -05:00
Binh-Minh Ribler
32bdd82cc8 [svn-r29782] Purpose: Code improvement
Description:
    - Removed ArrayType::rank and ArrayType::dimensions and modified the methods
      ArrayType::getArrayNDims and ArrayType::getArrayDims to always call the
      C functions to get the rank and dimensions.
    - Overloaded ArrayType::getArrayNDims and ArrayType::getArrayDims to provide
      const version and marked the non-const version deprecated.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-24 10:52:09 -05:00
Binh-Minh Ribler
997392079b [svn-r29766] Description:
- Changed object in catch statements to reference (left over from previous)

Platforms tested:
    Linux/32 2.6 (jam) (very minor)
2016-04-22 15:32:18 -05:00
Binh-Minh Ribler
c37607eb58 [svn-r29759] Purpose: Code improvements
Description:
    - Changed object in catch statements to reference
    - Replaced old-style casts or reinterpret_cast with static_cast
    - Removed unused name H5Library::need_cleanup
    - Removed Exception::printError from documentation
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-04-22 06:22:34 -05:00
Binh-Minh Ribler
20bfdeb2c1 [svn-r29361] Purpose: Correction
Description:
    Replaced static_cast with reinterpret_cast for "void *".
    Removed some commented-out old code.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-03-08 22:30:02 -05:00
Binh-Minh Ribler
116eed3ebd [svn-r29340] Purpose: Code cleanup
Description:
    - Removed many warnings:
        warning: use of old-style cast
        warning: enumeration value ‘H5D_VIRTUAL’ not handled in switch
        warning: comparison between signed and unsigned
      There are others of the same warnings and they will be taken care of
      in the next release.
    - Made some code reuse between overloads
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-03-08 07:23:54 -05:00
Binh-Minh Ribler
b346cb0599 [svn-r29306] Purpose: Add function
Description:
    Added member function ArrayType::operator= because ArrayType has
    pointer data members.
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-03-07 10:42:30 -05:00
Binh-Minh Ribler
a7ef06d593 [svn-r28906] Description:
Added c++/test/tarray.cpp.
2016-01-15 10:57:00 -05:00
Binh-Minh Ribler
0d68aa89ce [svn-r28905] Purpose: Fix user reported problem
Description:
    User Adam Rosenberger reported a failure when using the member function
    AbstractDs::getArrayType().  This problem was caused by missing
    initialization of the ArrayType's members in some cases.
Solution:
    - Added ArrayType::setArrayInfo() to retrieve rank and dimensions of
      an array and store them in memory for easy access.
    - Re-factored a few functions to use the new function.
    - We'll give him 1.8.16 patch
Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2016-01-15 10:53:33 -05:00
Jerome Soumagne
2094d86461 [svn-r28138] Add first support for _Bool and make hbool_t a "real" _Bool if available
Fix tests accordingly and fix misuse of hbool_t in various places

Fix initialization of H5Pgcpl/ocpl structs in property decoding routines

Tested on:
    Linux/32 (jam)
    Linux/64 (platypus)
    Linux/PPC64 (ostrich)
    MacOSX/64 10.11
2015-10-20 01:28:17 -05:00
Binh-Minh Ribler
f17eb1e610 [svn-r27961] Purpose: Partial fix of issues HDFFV-9169 and HDFFV-9167
Description:
    Added wrappers for H5P[s/g]et_attr_phase_change and H5P[s/g]et_attr_creation_order

    // Sets attribute storage phase change thresholds.
    void setAttrPhaseChange(unsigned max_compact = 8, unsigned min_dense = 6)

    // Gets attribute storage phase change thresholds.
    void getAttrPhaseChange(unsigned& max_compact, unsigned& min_dense)

    // Sets tracking and indexing of attribute creation order.
    void setAttrCrtOrder(unsigned crt_order_flags)

    // Gets tracking and indexing settings for attribute creation order.
    unsigned getAttrCrtOrder()

Platforms tested:
    Linux/32 2.6 (jam)
    Linux/64 (platypus)
    Darwin (osx1010test)
2015-10-05 23:31:58 -05:00
Dana Robinson
9af344117c [svn-r27794] Reintegration merge of features/autotools_rework branch with trunk
NOTES:

- Developers will have to run autogen.sh before building with the autotools.

- autogen.sh takes the -p option to mimic the old bin/reconfigure behavior.

- The generated error, overflow and version headers have been left in place.

- The generated H5LT parser code has also been left in place.

- There are no changes for CMake users at this time.

Tested on: h5committest
2015-09-15 15:38:57 -05:00
Quincey Koziol
1023374492 [svn-r27768] Description:
Complete revamp of package initialization/shutdown mechanism in the library.
Each package now has a single init/term routine.

    This new way should avoid packages being re-initialized during library
shutdown and is also be _much_ more proactive about giving feedback for
resource leaks internal to the library.

    Introduces a new "module" header file for packages in the library
(e.g src/H5Fmodule.h) which sets up some necessary package configuration macros
for the FUNC_ENTER/LEAVE macros.  (The VFL drivers have their own slightly
modified version of this header, src/H5FDdrvr_module.h)

    Also cleaned up a bunch of resources leaks all across the library and tests,
along with addressing many warnings, as I encountered them.

Tested on:
    MacOSX/64 10.10.5 (amazon) w/serial & parallel
    Linux/64 3.10.x (kituo) w/serial & parallel
    Linux/64 2.6.x (ostrich) w/serial
2015-09-13 22:58:59 -05:00
Dana Robinson
59aa015d9f [svn-r27638] Merged r27500-27631 from trunk. 2015-08-31 23:36:17 -05:00
Scot Breitenfeld
e6f9fc5f7f [svn-r27625] Added preprocessor commands for PGI compiler.
tested: h5committest
2015-08-31 13:49:17 -05:00
Dana Robinson
2e6100fb23 [svn-r27572] Removed VMS-specific code from the library.
The only remaining code consists of a few floating-point tests
that rely on pre-generated and checked-in VMS files. These have
been left alone, even though they will not be possible to
recreate, since testing VMS float behavior is still important.

Tested on: h5committest
2015-08-24 15:19:39 -05:00
Scot Breitenfeld
d06fee7bd2 [svn-r27517] Removed all perl scripts from configure.
Tested: h5committest
2015-08-17 16:12:03 -05:00
Dana Robinson
c27d180848 [svn-r27507] Merge of r27237-27500 from the trunk.
Tested w/ h5committest

NOTES: - The manifest may still be messed up.
       - Cmake fails since the dual binary work needs to be merged with
         this repo's CMake externals.
2015-08-14 14:58:54 -05:00
Scot Breitenfeld
caf0e7692a [svn-r27493] Trying again to merge the F2003_v1.10 branch to the trunk.
Tested: h5committest --PASSED--
2015-08-11 09:35:30 -05:00
Scot Breitenfeld
3b4696ccd1 [svn-r27489] reverted merge of branch 2015-08-10 20:22:33 -05:00
Scot Breitenfeld
a9bef45c75 [svn-r27470] svn merge -r27425:27460 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-08-05 16:35:30 -05:00
Allen Byrne
9e2434625d [svn-r27469] Merge from trunk with dual-binary CMake code.
Tested: local linux with CMake
2015-08-05 16:01:07 -05:00
Dana Robinson
fb27787c2a [svn-r27222] Merge of r27035-27221 from the trunk.
Tested on 64-bit linux VM:
    Serial: C++ and Fortran 2003
    Parallel: Fortran
2015-06-17 06:48:34 -05:00
Scot Breitenfeld
85bcb77904 [svn-r27221] Reworked Fortran autools REAL KIND detection. 2015-06-16 16:47:00 -05:00
Scot Breitenfeld
f2d14c76b8 [svn-r27186] added fix for jam with promoted reals and integers 2015-06-10 14:15:08 -05:00
Scot Breitenfeld
62401ac7c6 [svn-r27167] more DT fixes 2015-06-09 12:05:09 -05:00
Scot Breitenfeld
32703c9fc5 [svn-r27164] various bug fixes for DT 2015-06-08 16:13:15 -05:00
Scot Breitenfeld
8641814c4e [svn-r27154] fixed issue with mis-matching long double between Fortran and C 2015-06-05 17:17:13 -05:00
Scot Breitenfeld
043173a689 [svn-r27151] fixed __float128 errors 2015-06-04 15:26:02 -05:00
Scot Breitenfeld
4d500d4902 [svn-r27140] fixed interger*16 support 2015-06-03 09:13:58 -05:00
Scot Breitenfeld
f486fe1a49 [svn-r27137] svn merge -r27115:27135 https://svn.hdfgroup.uiuc.edu/hdf5/trunk 2015-06-02 09:46:51 -05:00
Mohamad Chaarawi
fc45d5fcb0 [svn-r27133] - Add a new attribute function characterstic for format:
* H5_ATTR_FORMAT(X,Y,Z)  __attribute__((format(X, Y, Z)))
- Rename UNUSED attribute characterstic to H5_ATTR_UNUSED.
- Rename NORETURN attribute characterstic to H5_ATTR_NORETURN

tested with h5committest.
2015-06-01 14:38:09 -05:00
Scot Breitenfeld
52e5579fba [svn-r27122] removed dependency on generatored fortran source code 2015-05-28 11:53:15 -05:00
Scot Breitenfeld
244784ab2c [svn-r27115] Moved testing KINDs and SIZEOFs to configure. 2015-05-27 17:07:18 -05:00
Dana Robinson
984ecb72c2 [svn-r27038] Merge of r26393-27031 from the trunk.
Tested on 64-bit linux VM w/ C++ and Fortran 2003
2015-05-07 16:05:14 -05:00
Scot Breitenfeld
5e6d18e5be [svn-r26869] removed the --enable-fortran2003 option, it is now just --enable-fortran 2015-04-21 13:33:25 -05:00
Scot Breitenfeld
0cc9b0c79f [svn-r26825] Added include for preprocessing fortran files with configure definitions 2015-04-16 13:36:34 -05:00