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Onion VFD (#1953)

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* Onion VFD feature

* Fixes onion VFD errors with non-sec2 backing store VFDs

* Disables the onion VFD tests w/ ph5diff

* Disables non-sec2 VFDs as onion VFD backing stores

* Committing clang-format changes

* Formatted source

* Typo

* Adds onion VFD tools tests to CMake

* Fixes for v16 API compatibility

* Memset structs to avoid bad frees on errors

* H5Dwrite() calls now use H5T_NATIVE_INT as the memory type vs LE

* Properly decodes checksums on BE machines

* Be more careful about uint64_t to haddr_t/hsize_t conversions

* Another fix for BE data comparison

* Removed double underscores from onion constants

* Replace hard-coded onion header string w/ constant

* Fixes cleanup paths in H5FD__onion_ingest_history()

* Fixed use of size_t revision numbers

* Fix h5dump revision count format string

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
This commit is contained in:
Dana Robinson
2022-08-02 12:54:40 -07:00
committed by GitHub
parent ea13de1bb0
commit fcf41b3cd6
55 changed files with 10632 additions and 39 deletions
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23
tools/test/h5diff/CMakeTests.cmake
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@@ -70,6 +70,13 @@
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_strings2.h5
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_eps1.h5
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_eps2.h5
# onion VFD files
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_onion_objs.h5
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_onion_objs.h5.onion
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_onion_dset_ext.h5
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_onion_dset_ext.h5.onion
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_onion_dset_1d.h5
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_onion_dset_1d.h5.onion
# tools/testfiles/vds
${HDF5_TOOLS_DIR}/testfiles/vds/1_a.h5
${HDF5_TOOLS_DIR}/testfiles/vds/1_b.h5
@@ -295,6 +302,9 @@
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_801.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_830.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_90.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_900.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_901.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_902.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8625.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8639.txt
${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_reg.txt
@@ -932,6 +942,12 @@
h5diff_8639.out.err
h5diff_90.out
h5diff_90.out.err
h5diff_900.out
h5diff_900.out.err
h5diff_901.out
h5diff_901.out.err
h5diff_902.out
h5diff_902.out.err
h5diff_v1.out
h5diff_v1.out.err
h5diff_v2.out
@@ -1563,6 +1579,13 @@ ADD_H5_TEST (h5diff_v1 0 -v ${FILEV1} ${FILEV2})
ADD_H5_TEST (h5diff_v2 0 -r ${FILEV1} ${FILEV2})
ADD_H5_TEST (h5diff_v3 0 -c ${FILEV1} ${FILEV2})
# ##############################################################################
# # onion VFD tests (serial only)
# ##############################################################################
ADD_SH5_TEST (h5diff_900 1 -r -v --vfd-name-1 onion --vfd-info-1 0 --vfd-name-2 onion --vfd-info-2 1 h5diff_onion_objs.h5 h5diff_onion_objs.h5)
ADD_SH5_TEST (h5diff_901 0 -r -v --vfd-name-1 onion --vfd-info-1 0 --vfd-name-2 onion --vfd-info-2 1 h5diff_onion_dset_ext.h5 h5diff_onion_dset_ext.h5)
ADD_SH5_TEST (h5diff_902 1 -r -v --vfd-name-1 onion --vfd-info-1 0 --vfd-name-2 onion --vfd-info-2 1 h5diff_onion_dset_1d.h5 h5diff_onion_dset_1d.h5)
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### P L U G I N T E S T S
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