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Brings java wrapper updates from develop

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The wrappers compile but fail tests due to some missing develop
functionality
This commit is contained in:
Dana Robinson
2021-05-06 14:07:08 -07:00
parent 457b199a38
commit f2cb86499e
219 changed files with 9672 additions and 2742 deletions
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118
java/test/TestH5R.java
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@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -39,11 +38,11 @@ public class TestH5R {
private static final String H5_FILE = "testH5R.h5";
private static final int DIM_X = 4;
private static final int DIM_Y = 6;
long H5fid = -1;
long H5dsid = -1;
long H5did = -1;
long H5gid = -1;
long H5did2 = -1;
long H5fid = HDF5Constants.H5I_INVALID_HID;
long H5dsid = HDF5Constants.H5I_INVALID_HID;
long H5did = HDF5Constants.H5I_INVALID_HID;
long H5gid = HDF5Constants.H5I_INVALID_HID;
long H5did2 = HDF5Constants.H5I_INVALID_HID;
long[] H5dims = { DIM_X, DIM_Y };
int[][] dset_data = new int[DIM_X][DIM_Y];
int FILLVAL = 99;
@@ -62,7 +61,7 @@ public class TestH5R {
}
private final long _createDataset(long fid, long dsid, String name, long dapl) {
long did = -1;
long did = HDF5Constants.H5I_INVALID_HID;
try {
did = H5.H5Dcreate(fid, name,
HDF5Constants.H5T_STD_I32BE, dsid,
@@ -78,7 +77,7 @@ public class TestH5R {
}
private final long _createGroup(long fid, String name) {
long gid = -1;
long gid = HDF5Constants.H5I_INVALID_HID;
try {
gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
@@ -150,109 +149,6 @@ public class TestH5R {
System.out.println();
}
// Test v1.8 APIs params
/*
* @Ignore public void testH5Rget_name() { long loc_id = H5fid; int ref_type =
* HDF5Constants.H5R_OBJECT; long ret_val = -1; byte[] ref = null; String[] name = {""}; String
* objName = "/dset";
*
* try { ref = H5.H5Rcreate(H5fid, objName, ref_type, -1); } catch (Throwable err) {
* err.printStackTrace(); fail("H5.H5Rget_name:H5Rcreate " + err); }
*
* try { ret_val = H5.H5Rget_name(loc_id, ref_type, ref, name, 16); } catch (Throwable err) {
* err.printStackTrace(); fail("H5.H5Rget_name: " + err); }
*
* assertTrue("testH5Rget_name: H5Rget_name", ret_val>0); assertTrue("The name of the object: ",
* objName.equals(name[0])); }
*
* @Ignore public void testH5Rget_obj_type2() { int ref_type=HDF5Constants.H5R_OBJECT; byte[]
* ref=null;
*
* String objName = "/dset"; int obj_type = -1;
*
* try { ref = H5.H5Rcreate(H5fid, objName, ref_type, -1); } catch(Throwable err) {
* err.printStackTrace(); }
*
* try { obj_type = H5.H5Rget_obj_type(H5fid, HDF5Constants.H5R_OBJECT, ref); } catch (Throwable
* err) { err.printStackTrace(); fail("H5.H5Rget_obj_type2: " + err); } assertEquals(obj_type,
* HDF5Constants.H5O_TYPE_DATASET); }
*
* @Ignore public void testH5Rcreate_refobj() { byte[] ref = null;
*
* try { ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1); } catch (Throwable err) {
* err.printStackTrace(); fail("H5.H5Rcreate: " + err); } assertNotNull(ref); }
*
* @Ignore public void testH5Rcreate_regionrefobj() { byte[] ref = null; try { ref =
* H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); } catch (Throwable err) {
* err.printStackTrace(); fail("H5.H5Rcreate: " + err); } assertNotNull(ref); }
*
* @Ignore public void testH5Rdereference() { byte[] ref1 = null; byte[] ref2 = null; long
* dataset_id = -1; long group_id = -1; try { //Create reference on dataset ref1 =
* H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); dataset_id=
* H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
*
* //Create reference on group ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
* group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
* assertNotNull(ref1); assertNotNull(ref2); assertTrue(dataset_id >= 0); assertTrue(group_id >= 0);
* } catch (Throwable err) { err.printStackTrace(); fail("TestH5Rdereference " + err); } finally {
* try {H5.H5Dclose(dataset_id);} catch (Exception ex) {} try {H5.H5Gclose(group_id);} catch
* (Exception ex) {} } }
*
* @Ignore public void testH5Rget_region() { byte[] ref = null; long dsid = -1; try { ref =
* H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); dsid =
* H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref); assertNotNull(ref);
* assertTrue(dsid >= 0); } catch (Throwable err) { err.printStackTrace();
* fail("TestH5Rget_region: " + err); } finally { try {H5.H5Sclose(dsid);} catch (Exception ex) {} }
* }
*
* @Ignore//(expected = IllegalArgumentException.class) public void testH5Rget_name_Invalidreftype()
* throws Throwable { byte[] ref = null; String[] name = {""}; ref = H5.H5Rcreate(H5fid, "/dset",
* HDF5Constants.H5R_OBJECT, -1); H5.H5Rget_name(H5fid, HDF5Constants.H5R_DATASET_REGION, ref, name,
* 16); }
*
* @Ignore//(expected = NullPointerException.class) public void testH5Rget_name_NULLreference()
* throws Throwable { byte[] ref = null; String[] name = {""}; H5.H5Rget_name(H5fid,
* HDF5Constants.H5R_OBJECT, ref, name, 16); }
*
* @Ignore//(expected = HDF5LibraryException.class) public void
* testH5Rget_obj_type2_Invalidreftype() throws Throwable { byte[] ref = null; ref =
* H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1); H5.H5Rget_obj_type(H5fid,
* HDF5Constants.H5R_DATASET_REGION, ref); }
*
* @Ignore//(expected = HDF5LibraryException.class) public void testH5Rcreate_InvalidObjectName()
* throws Throwable { byte[] ref=H5.H5Rcreate(H5fid, "/GROUPS", HDF5Constants.H5R_OBJECT, -1); }
*
* @Ignore//(expected = HDF5LibraryException.class) public void testH5Rcreate_Invalidspace_id()
* throws Throwable { byte[] ref=H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, -1);
* }
*
* @Ignore//(expected = IllegalArgumentException.class) public void testH5Rcreate_Invalidreftype()
* throws Throwable { byte[] ref=H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_BADTYPE, -1); }
*
* @Ignore//(expected = IllegalArgumentException.class) public void
* testH5Rgetregion_Invalidreftype() throws Throwable { byte[] ref = null; ref = H5.H5Rcreate(H5fid,
* "/dset", HDF5Constants.H5R_OBJECT, H5dsid); H5.H5Rget_region(H5fid,
* HDF5Constants.H5R_DATASET_REGION, ref); }
*
* @Ignore//(expected = IllegalArgumentException.class) public void
* testH5Rgetregion_Badreferencetype() throws Throwable { byte[] ref = null; ref =
* H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, H5dsid); H5.H5Rget_region(H5fid,
* HDF5Constants.H5R_OBJECT, ref); }
*
* @Ignore//(expected = NullPointerException.class) public void testH5Rgetregion_Nullreference()
* throws Throwable { byte[] ref = null; H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION,
* ref); }
*
* @Ignore//(expected = NullPointerException.class) public void testH5Rdereference_Nullreference()
* throws Throwable { byte[] ref = null; H5.H5Rdereference(H5did2, HDF5Constants.H5P_DEFAULT,
* HDF5Constants.H5R_OBJECT, ref); }
*
* @Ignore//(expected = IllegalArgumentException.class) public void
* testH5Rdereference_Invalidreference() throws Throwable { byte[] ref1 = null; byte[] ref2 = null;
* ref1 = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); ref2 =
* H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1); H5.H5Rdereference(H5gid,
* HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref1); }
*/
// Test v1.12 APIs params
@Test