Whitespace and benign synchro changes

This commit is contained in:
Allen Byrne
2019-10-02 12:43:56 -05:00
parent 322a347ac8
commit e2c5f6dd2b
72 changed files with 2127 additions and 1408 deletions

View File

@@ -6,13 +6,17 @@ usage: h5repack [OPTIONS] file1 file2
-v, --verbose Verbose mode, print object information
-V, --version Print version number and exit
-n, --native Use a native HDF5 type when repacking
--enable-error-stack Prints messages from the HDF5 error stack as they occur
--enable-error-stack Prints messages from the HDF5 error stack as they
occur
-L, --latest Use latest version of file format
This option will take precedence over the -j and -k options
--low=BOUND The low bound for library release versions to use when creating
objects in the file (default is H5F_LIBVER_EARLIEST)
--high=BOUND The high bound for library release versions to use when creating
objects in the file (default is H5F_LIBVER_LATEST)
This option will take precedence over the options
--low and --high
--low=BOUND The low bound for library release versions to use
when creating objects in the file
(default is H5F_LIBVER_EARLIEST)
--high=BOUND The high bound for library release versions to use
when creating objects in the file
(default is H5F_LIBVER_LATEST)
-c L1, --compact=L1 Maximum number of links in header messages
-d L2, --indexed=L2 Minimum number of links in the indexed format
-s S[:F], --ssize=S[:F] Shared object header message minimum size
@@ -27,10 +31,14 @@ usage: h5repack [OPTIONS] file1 file2
-z Z, --sort_order=Z Sort groups and attributes by order Z
-f FILT, --filter=FILT Filter type
-l LAYT, --layout=LAYT Layout type
-S FS_STRATEGY, --fs_strategy=FS_STRATEGY File space management strategy for H5Pset_file_space_strategy
-P FS_PERSIST, --fs_persist=FS_PERSIST Persisting or not persisting free-space for H5Pset_file_space_strategy
-T FS_THRESHOLD, --fs_threshold=FS_THRESHOLD Free-space section threshold for H5Pset_file_space_strategy
-G FS_PAGESIZE, --fs_pagesize=FS_PAGESIZE File space page size for H5Pset_file_space_page_size
-S FS_STRATEGY, --fs_strategy=FS_STRATEGY File space management strategy for
H5Pset_file_space_strategy
-P FS_PERSIST, --fs_persist=FS_PERSIST Persisting or not persisting free-
space for H5Pset_file_space_strategy
-T FS_THRESHOLD, --fs_threshold=FS_THRESHOLD Free-space section threshold
for H5Pset_file_space_strategy
-G FS_PAGESIZE, --fs_pagesize=FS_PAGESIZE File space page size for
H5Pset_file_space_page_size
M - is an integer greater than 1, size of dataset in bytes (default is 0)
E - is a filename.
@@ -38,15 +46,17 @@ usage: h5repack [OPTIONS] file1 file2
U - is a filename.
T - is an integer
A - is an integer greater than zero
Q - is the sort index type for the input file. It can be "name" or "creation_order" (default)
Z - is the sort order type for the input file. It can be "descending" or "ascending" (default)
Q - is the sort index type for the input file. It can be "name" or
"creation_order" (default)
Z - is the sort order type for the input file. It can be "descending" or
"ascending" (default)
B - is the user block size, any value that is 512 or greater and is
a power of 2 (1024 default)
F - is the shared object header message type, any of <dspace|dtype|fill|
pline|attr>. If F is not specified, S applies to all messages
BOUND is an integer indicating the library release versions to use when creating
objects in the file (see H5Pset_libver_bounds()):
BOUND is an integer indicating the library release versions to use when
creating objects in the file (see H5Pset_libver_bounds()):
0: This is H5F_LIBVER_EARLIEST in H5F_libver_t struct
1: This is H5F_LIBVER_V18 in H5F_libver_t struct
2: This is H5F_LIBVER_V110 in H5F_libver_t struct
@@ -54,24 +64,31 @@ usage: h5repack [OPTIONS] file1 file2
FS_STRATEGY is a string indicating the file space strategy used:
FSM_AGGR:
The mechanisms used in managing file space are free-space managers, aggregators and virtual file driver.
The mechanisms used in managing file space are free-space
managers, aggregators and virtual file driver.
PAGE:
The mechanisms used in managing file space are free-space managers with embedded paged aggregation and virtual file driver.
The mechanisms used in managing file space are free-space
managers with embedded paged aggregation and virtual file driver.
AGGR:
The mechanisms used in managing file space are aggregators and virtual file driver.
The mechanisms used in managing file space are aggregators and
virtual file driver.
NONE:
The mechanisms used in managing file space are virtual file driver.
The default strategy when not set is FSM_AGGR without persisting free-space.
The mechanisms used in managing file space are virtual file
driver.
The default strategy when not set is FSM_AGGR without persisting free-
space.
FS_PERSIST is 1 to persisting free-space or 0 to not persisting free-space.
The default when not set is not persisting free-space.
The value is ignored for AGGR and NONE strategies.
FS_THRESHOLD is the minimum size (in bytes) of free-space sections to be tracked by the library.
FS_THRESHOLD is the minimum size (in bytes) of free-space sections to be
tracked by the library.
The default when not set is 1.
The value is ignored for AGGR and NONE strategies.
FS_PAGESIZE is the size (in bytes) >=512 that is used by the library when the file space strategy PAGE is used.
FS_PAGESIZE is the size (in bytes) >=512 that is used by the library when
the file space strategy PAGE is used.
The default when not set is 4096.
FILT - is a string with the format:
@@ -99,9 +116,9 @@ usage: h5repack [OPTIONS] file1 file2
NBIT (no parameter)
SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type
is either IN or DS
UD=<filter_number,filter_flag,cd_value_count,value_1[,value_2,...,value_N]>
required values for filter_number,filter_flag,cd_value_count,value_1
optional values for value_2 to value_N
UD=<filter_number,filter_flag,cd_value_count,value1[,value2,...,valueN]>
Required values: filter_number, filter_flag, cd_value_count, value1
Optional values: value2 to valueN
NONE (no parameter)
LAYT - is a string with the format:
@@ -138,12 +155,12 @@ Examples of use:
4) h5repack -L -c 10 -s 20:dtype file1 file2
Using latest file format with maximum compact group size of 10 and
and minimum shared datatype size of 20
minimum shared datatype size of 20
5) h5repack --low=0 --high=1 file1 file2
Set low=H5F_LIBVER_EARLIEST and high=H5F_LIBVER_V18 via H5Pset_libver_bounds() when
creating the repacked file: file2
Set low=H5F_LIBVER_EARLIEST and high=H5F_LIBVER_V18 via
H5Pset_libver_bounds() when creating the repacked file, file2
5) h5repack -f SHUF -f GZIP=1 file1 file2