Clang-format of source files
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@@ -29,184 +29,174 @@ using std::endl;
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#include "H5Cpp.h"
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using namespace H5;
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const H5std_string FILE_NAME( "SDS.h5" );
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const H5std_string DATASET_NAME( "IntArray" );
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const int NX_SUB = 3; // hyperslab dimensions
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const int NY_SUB = 4;
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const int NX = 7; // output buffer dimensions
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const int NY = 7;
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const int NZ = 3;
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const int RANK_OUT = 3;
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const H5std_string FILE_NAME("SDS.h5");
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const H5std_string DATASET_NAME("IntArray");
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const int NX_SUB = 3; // hyperslab dimensions
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const int NY_SUB = 4;
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const int NX = 7; // output buffer dimensions
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const int NY = 7;
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const int NZ = 3;
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const int RANK_OUT = 3;
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int main (void)
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int
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main(void)
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{
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/*
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* Output buffer initialization.
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*/
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int i, j, k;
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int data_out[NX][NY][NZ ]; /* output buffer */
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for (j = 0; j < NX; j++)
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{
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for (i = 0; i < NY; i++)
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{
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for (k = 0; k < NZ ; k++)
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data_out[j][i][k] = 0;
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}
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}
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/*
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* Output buffer initialization.
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*/
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int i, j, k;
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int data_out[NX][NY][NZ]; /* output buffer */
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for (j = 0; j < NX; j++) {
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for (i = 0; i < NY; i++) {
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for (k = 0; k < NZ; k++)
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data_out[j][i][k] = 0;
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}
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}
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/*
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* Try block to detect exceptions raised by any of the calls inside it
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*/
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try
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{
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/*
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* Turn off the auto-printing when failure occurs so that we can
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* handle the errors appropriately
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*/
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Exception::dontPrint();
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/*
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* Try block to detect exceptions raised by any of the calls inside it
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*/
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try {
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/*
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* Turn off the auto-printing when failure occurs so that we can
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* handle the errors appropriately
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*/
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Exception::dontPrint();
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/*
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* Open the specified file and the specified dataset in the file.
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*/
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H5File file( FILE_NAME, H5F_ACC_RDONLY );
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DataSet dataset = file.openDataSet( DATASET_NAME );
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/*
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* Open the specified file and the specified dataset in the file.
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*/
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H5File file(FILE_NAME, H5F_ACC_RDONLY);
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DataSet dataset = file.openDataSet(DATASET_NAME);
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/*
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* Get the class of the datatype that is used by the dataset.
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*/
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H5T_class_t type_class = dataset.getTypeClass();
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/*
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* Get the class of the datatype that is used by the dataset.
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*/
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H5T_class_t type_class = dataset.getTypeClass();
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/*
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* Get class of datatype and print message if it's an integer.
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*/
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if( type_class == H5T_INTEGER )
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{
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cout << "Data set has INTEGER type" << endl;
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/*
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* Get class of datatype and print message if it's an integer.
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*/
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if (type_class == H5T_INTEGER) {
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cout << "Data set has INTEGER type" << endl;
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/*
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* Get the integer datatype
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*/
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IntType intype = dataset.getIntType();
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/*
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* Get the integer datatype
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*/
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IntType intype = dataset.getIntType();
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/*
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* Get order of datatype and print message if it's a little endian.
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*/
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H5std_string order_string;
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H5T_order_t order = intype.getOrder( order_string );
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cout << order_string << endl;
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/*
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* Get order of datatype and print message if it's a little endian.
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*/
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H5std_string order_string;
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H5T_order_t order = intype.getOrder(order_string);
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cout << order_string << endl;
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/*
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* Get size of the data element stored in file and print it.
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*/
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size_t size = intype.getSize();
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cout << "Data size is " << size << endl;
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}
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/*
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* Get size of the data element stored in file and print it.
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*/
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size_t size = intype.getSize();
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cout << "Data size is " << size << endl;
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}
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/*
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* Get dataspace of the dataset.
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*/
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DataSpace dataspace = dataset.getSpace();
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/*
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* Get dataspace of the dataset.
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*/
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DataSpace dataspace = dataset.getSpace();
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/*
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* Get the number of dimensions in the dataspace.
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*/
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int rank = dataspace.getSimpleExtentNdims();
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/*
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* Get the number of dimensions in the dataspace.
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*/
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int rank = dataspace.getSimpleExtentNdims();
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/*
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* Get the dimension size of each dimension in the dataspace and
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* display them.
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*/
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hsize_t dims_out[2];
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int ndims = dataspace.getSimpleExtentDims( dims_out, NULL);
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cout << "rank " << rank << ", dimensions " <<
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(unsigned long)(dims_out[0]) << " x " <<
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(unsigned long)(dims_out[1]) << endl;
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/*
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* Get the dimension size of each dimension in the dataspace and
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* display them.
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*/
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hsize_t dims_out[2];
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int ndims = dataspace.getSimpleExtentDims(dims_out, NULL);
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cout << "rank " << rank << ", dimensions " << (unsigned long)(dims_out[0]) << " x "
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<< (unsigned long)(dims_out[1]) << endl;
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/*
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* Define hyperslab in the dataset; implicitly giving strike and
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* block NULL.
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*/
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hsize_t offset[2]; // hyperslab offset in the file
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hsize_t count[2]; // size of the hyperslab in the file
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offset[0] = 1;
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offset[1] = 2;
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count[0] = NX_SUB;
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count[1] = NY_SUB;
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dataspace.selectHyperslab( H5S_SELECT_SET, count, offset );
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/*
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* Define hyperslab in the dataset; implicitly giving strike and
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* block NULL.
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*/
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hsize_t offset[2]; // hyperslab offset in the file
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hsize_t count[2]; // size of the hyperslab in the file
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offset[0] = 1;
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offset[1] = 2;
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count[0] = NX_SUB;
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count[1] = NY_SUB;
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dataspace.selectHyperslab(H5S_SELECT_SET, count, offset);
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/*
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* Define the memory dataspace.
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*/
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hsize_t dimsm[3]; /* memory space dimensions */
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dimsm[0] = NX;
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dimsm[1] = NY;
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dimsm[2] = NZ ;
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DataSpace memspace( RANK_OUT, dimsm );
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/*
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* Define the memory dataspace.
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*/
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hsize_t dimsm[3]; /* memory space dimensions */
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dimsm[0] = NX;
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dimsm[1] = NY;
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dimsm[2] = NZ;
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DataSpace memspace(RANK_OUT, dimsm);
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/*
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* Define memory hyperslab.
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*/
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hsize_t offset_out[3]; // hyperslab offset in memory
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hsize_t count_out[3]; // size of the hyperslab in memory
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offset_out[0] = 3;
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offset_out[1] = 0;
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offset_out[2] = 0;
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count_out[0] = NX_SUB;
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count_out[1] = NY_SUB;
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count_out[2] = 1;
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memspace.selectHyperslab( H5S_SELECT_SET, count_out, offset_out );
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/*
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* Define memory hyperslab.
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*/
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hsize_t offset_out[3]; // hyperslab offset in memory
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hsize_t count_out[3]; // size of the hyperslab in memory
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offset_out[0] = 3;
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offset_out[1] = 0;
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offset_out[2] = 0;
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count_out[0] = NX_SUB;
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count_out[1] = NY_SUB;
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count_out[2] = 1;
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memspace.selectHyperslab(H5S_SELECT_SET, count_out, offset_out);
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/*
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* Read data from hyperslab in the file into the hyperslab in
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* memory and display the data.
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*/
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dataset.read( data_out, PredType::NATIVE_INT, memspace, dataspace );
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/*
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* Read data from hyperslab in the file into the hyperslab in
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* memory and display the data.
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*/
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dataset.read(data_out, PredType::NATIVE_INT, memspace, dataspace);
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for (j = 0; j < NX; j++)
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{
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for (i = 0; i < NY; i++)
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cout << data_out[j][i][0] << " ";
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cout << endl;
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}
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/*
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* 0 0 0 0 0 0 0
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* 0 0 0 0 0 0 0
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* 0 0 0 0 0 0 0
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* 3 4 5 6 0 0 0
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* 4 5 6 7 0 0 0
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* 5 6 7 8 0 0 0
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* 0 0 0 0 0 0 0
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*/
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} // end of try block
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for (j = 0; j < NX; j++) {
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for (i = 0; i < NY; i++)
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cout << data_out[j][i][0] << " ";
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cout << endl;
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}
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/*
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* 0 0 0 0 0 0 0
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* 0 0 0 0 0 0 0
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* 0 0 0 0 0 0 0
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* 3 4 5 6 0 0 0
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* 4 5 6 7 0 0 0
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* 5 6 7 8 0 0 0
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* 0 0 0 0 0 0 0
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*/
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} // end of try block
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// catch failure caused by the H5File operations
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catch( FileIException error )
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{
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error.printErrorStack();
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return -1;
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}
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// catch failure caused by the H5File operations
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catch (FileIException error) {
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error.printErrorStack();
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return -1;
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}
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// catch failure caused by the DataSet operations
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catch( DataSetIException error )
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{
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error.printErrorStack();
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return -1;
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}
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// catch failure caused by the DataSet operations
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catch (DataSetIException error) {
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error.printErrorStack();
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return -1;
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}
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// catch failure caused by the DataSpace operations
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catch( DataSpaceIException error )
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{
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error.printErrorStack();
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return -1;
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}
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// catch failure caused by the DataSpace operations
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catch (DataSpaceIException error) {
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error.printErrorStack();
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return -1;
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}
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// catch failure caused by the DataSpace operations
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catch( DataTypeIException error )
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{
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error.printErrorStack();
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return -1;
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}
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// catch failure caused by the DataSpace operations
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catch (DataTypeIException error) {
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error.printErrorStack();
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return -1;
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}
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return 0; // successfully terminated
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return 0; // successfully terminated
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}
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