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1 12 merge java copyright header changes (#391)

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* OESS-98 fix tools test for plugins

* sync fork

* Merge of changes from dev

* Move problem option to bottom of the list until fixed

* HDFFV-11106 - fix parsing optional args

* HDFFV-11106 add note

* grammer fix

* Whitespace after clang formatting

* Undo format version 11 changes

* Update check to working version

* Merge workflow and minor changes from develop

* Update supported platforms

* PR#3 merge from develop

* Merge gcc 10 diagnostics option from develop

* Merge #318 OSX changes from develop

* Merge serval small changes from dev

* fix typo

* Minor non-space formatting changes

* GH #386 copyright corrections for java folder

* revert because logic requires false return
This commit is contained in:
Allen Byrne
2021-03-01 14:07:44 -06:00
committed by GitHub
parent 7c507003c7
commit 498a6de935
232 changed files with 2484 additions and 1857 deletions
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19
java/examples/datatypes/H5Ex_T_Array.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -34,11 +33,11 @@ public class H5Ex_T_Array {
private static final int NDIMS = 2;
private static void CreateDataset() {
long file_id = -1;
long filetype_id = -1;
long memtype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
long[] adims = { ADIM0, ADIM1 };
int[][][] dset_data = new int[DIM0][ADIM0][ADIM1];
@@ -152,10 +151,10 @@ public class H5Ex_T_Array {
}
private static void ReadDataset() {
long file_id = -1;
long filetype_id = -1;
long memtype_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
long[] adims = { ADIM0, ADIM1 };
int[][][] dset_data;

25
java/examples/datatypes/H5Ex_T_ArrayAttribute.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -35,12 +34,12 @@ public class H5Ex_T_ArrayAttribute {
private static final int NDIMS = 2;
private static void CreateDataset() {
long file_id = -1;
long filetype_id = -1;
long memtype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
long[] adims = { ADIM0, ADIM1 };
int[][][] dset_data = new int[DIM0][ADIM0][ADIM1];
@@ -84,7 +83,7 @@ public class H5Ex_T_ArrayAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -175,11 +174,11 @@ public class H5Ex_T_ArrayAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long filetype_id = -1;
long memtype_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
long[] adims = { ADIM0, ADIM1 };
int[][][] dset_data;

13
java/examples/datatypes/H5Ex_T_Bit.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -32,9 +31,9 @@ public class H5Ex_T_Bit {
private static final int RANK = 2;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data = new int[DIM0][DIM1];
@@ -116,9 +115,9 @@ public class H5Ex_T_Bit {
}
private static void ReadDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data;

19
java/examples/datatypes/H5Ex_T_BitAttribute.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -33,10 +32,10 @@ public class H5Ex_T_BitAttribute {
private static final int RANK = 2;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data = new int[DIM0][DIM1];
@@ -66,7 +65,7 @@ public class H5Ex_T_BitAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -139,10 +138,10 @@ public class H5Ex_T_BitAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data;

13
java/examples/datatypes/H5Ex_T_Commit.java
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@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -101,9 +100,9 @@ public class H5Ex_T_Commit {
}
private static void CreateDataType() {
long file_id = -1;
long strtype_id = -1;
long filetype_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long strtype_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
Sensor_Datatype datatypes = new Sensor_Datatype();
// Create a new file using default properties.
try {
@@ -183,9 +182,9 @@ public class H5Ex_T_Commit {
}
private static void ReadDataType() {
long file_id = -1;
long typeclass_id = -1;
long filetype_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long typeclass_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
// Open an existing file.
try {

23
java/examples/datatypes/H5Ex_T_Compound.java
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@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -122,12 +121,12 @@ public class H5Ex_T_Compound {
}
private static void CreateDataset() {
long file_id = -1;
long strtype_id = -1;
long memtype_id = -1;
long filetype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long strtype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
Sensor[] object_data = new Sensor[DIM0];
byte[] dset_data = null;
@@ -286,11 +285,11 @@ public class H5Ex_T_Compound {
}
private static void ReadDataset() {
long file_id = -1;
long strtype_id = -1;
long memtype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long strtype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
Sensor[] object_data2;
byte[] dset_data;

29
java/examples/datatypes/H5Ex_T_CompoundAttribute.java
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@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -125,13 +124,13 @@ public class H5Ex_T_CompoundAttribute {
}
private static void CreateDataset() {
long file_id = -1;
long strtype_id = -1;
long memtype_id = -1;
long filetype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long strtype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
Sensor[] object_data = new Sensor[DIM0];
byte[] dset_data = null;
@@ -205,7 +204,7 @@ public class H5Ex_T_CompoundAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -310,12 +309,12 @@ public class H5Ex_T_CompoundAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long strtype_id = -1;
long memtype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long strtype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
Sensor[] object_data2;
byte[] dset_data;

13
java/examples/datatypes/H5Ex_T_Float.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -36,9 +35,9 @@ public class H5Ex_T_Float {
private static final int RANK = 2;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
double[][] dset_data = new double[DIM0][DIM1];
@@ -120,9 +119,9 @@ public class H5Ex_T_Float {
}
private static void ReadDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
double[][] dset_data;

19
java/examples/datatypes/H5Ex_T_FloatAttribute.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -37,10 +36,10 @@ public class H5Ex_T_FloatAttribute {
private static final int RANK = 2;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
double[][] dset_data = new double[DIM0][DIM1];
@@ -66,7 +65,7 @@ public class H5Ex_T_FloatAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -139,10 +138,10 @@ public class H5Ex_T_FloatAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
double[][] dset_data;

13
java/examples/datatypes/H5Ex_T_Integer.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -34,9 +33,9 @@ public class H5Ex_T_Integer {
private static final int RANK = 2;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data = new int[DIM0][DIM1];
@@ -117,9 +116,9 @@ public class H5Ex_T_Integer {
}
private static void ReadDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data;

19
java/examples/datatypes/H5Ex_T_IntegerAttribute.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -35,10 +34,10 @@ public class H5Ex_T_IntegerAttribute {
private static final int RANK = 2;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data = new int[DIM0][DIM1];
@@ -64,7 +63,7 @@ public class H5Ex_T_IntegerAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -137,10 +136,10 @@ public class H5Ex_T_IntegerAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0, DIM1 };
int[][] dset_data;

25
java/examples/datatypes/H5Ex_T_ObjectReference.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -65,11 +64,11 @@ public class H5Ex_T_ObjectReference {
}
private static void writeObjRef() {
long file_id = -1;
long dataspace_id = -1;
long filespace_id = -1;
long group_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long filespace_id = HDF5Constants.H5I_INVALID_HID;
long group_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[][] dset_data = new byte[DIM0][8];
@@ -90,9 +89,9 @@ public class H5Ex_T_ObjectReference {
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
if (dataset_id >= 0)
H5.H5Dclose(dataset_id);
dataset_id = -1;
dataset_id = HDF5Constants.H5I_INVALID_HID;
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -106,7 +105,7 @@ public class H5Ex_T_ObjectReference {
HDF5Constants.H5P_DEFAULT);
if (group_id >= 0)
H5.H5Gclose(group_id);
group_id = -1;
group_id = HDF5Constants.H5I_INVALID_HID;
}
catch (Exception e) {
e.printStackTrace();
@@ -187,11 +186,11 @@ public class H5Ex_T_ObjectReference {
}
private static void readObjRef() {
long file_id = -1;
long dataset_id = -1;
long dataspace_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
int object_type = -1;
long object_id = -1;
long object_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[][] dset_data;

29
java/examples/datatypes/H5Ex_T_ObjectReferenceAttribute.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -67,11 +66,11 @@ public class H5Ex_T_ObjectReferenceAttribute {
}
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long group_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long group_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[][] dset_data = new byte[DIM0][8];
@@ -92,9 +91,9 @@ public class H5Ex_T_ObjectReferenceAttribute {
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
if (dataset_id >= 0)
H5.H5Dclose(dataset_id);
dataset_id = -1;
dataset_id = HDF5Constants.H5I_INVALID_HID;
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -108,7 +107,7 @@ public class H5Ex_T_ObjectReferenceAttribute {
HDF5Constants.H5P_DEFAULT);
if (group_id >= 0)
H5.H5Gclose(group_id);
group_id = -1;
group_id = HDF5Constants.H5I_INVALID_HID;
}
catch (Exception e) {
e.printStackTrace();
@@ -139,7 +138,7 @@ public class H5Ex_T_ObjectReferenceAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -212,12 +211,12 @@ public class H5Ex_T_ObjectReferenceAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
int object_type = -1;
long object_id = -1;
long object_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[][] dset_data;

19
java/examples/datatypes/H5Ex_T_Opaque.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -32,10 +31,10 @@ public class H5Ex_T_Opaque {
private static final int RANK = 1;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long datatype_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long datatype_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[] dset_data = new byte[DIM0 * LEN];
byte[] str_data = { 'O', 'P', 'A', 'Q', 'U', 'E' };
@@ -138,11 +137,11 @@ public class H5Ex_T_Opaque {
}
private static void ReadDataset() {
long file_id = -1;
long datatype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long type_len = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long datatype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long type_len = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[] dset_data;
String tag_name = null;

23
java/examples/datatypes/H5Ex_T_OpaqueAttribute.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -33,11 +32,11 @@ public class H5Ex_T_OpaqueAttribute {
private static final int RANK = 1;
private static void CreateDataset() {
long file_id = -1;
long dataspace_id = -1;
long datatype_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long datatype_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[] dset_data = new byte[DIM0 * LEN];
byte[] str_data = { 'O', 'P', 'A', 'Q', 'U', 'E' };
@@ -65,7 +64,7 @@ public class H5Ex_T_OpaqueAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -158,11 +157,11 @@ public class H5Ex_T_OpaqueAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long datatype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long datatype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long type_len = -1;
long[] dims = { DIM0 };
byte[] dset_data;

21
java/examples/datatypes/H5Ex_T_String.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -32,11 +31,11 @@ public class H5Ex_T_String {
private static final int RANK = 1;
private static void CreateDataset() {
long file_id = -1;
long memtype_id = -1;
long filetype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[][] dset_data = new byte[DIM0][SDIM];
StringBuffer[] str_data = { new StringBuffer("Parting"), new StringBuffer("is such"),
@@ -156,11 +155,11 @@ public class H5Ex_T_String {
}
private static void ReadDataset() {
long file_id = -1;
long filetype_id = -1;
long memtype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long sdim = 0;
long[] dims = { DIM0 };
byte[][] dset_data;

27
java/examples/datatypes/H5Ex_T_StringAttribute.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -33,12 +32,12 @@ public class H5Ex_T_StringAttribute {
private static final int RANK = 1;
private static void CreateDataset() {
long file_id = -1;
long memtype_id = -1;
long filetype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
byte[][] dset_data = new byte[DIM0][SDIM];
StringBuffer[] str_data = { new StringBuffer("Parting"), new StringBuffer("is such"),
@@ -80,7 +79,7 @@ public class H5Ex_T_StringAttribute {
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, dataspace_id,
HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
H5.H5Sclose(dataspace_id);
dataspace_id = -1;
dataspace_id = HDF5Constants.H5I_INVALID_HID;
}
}
catch (Exception e) {
@@ -179,12 +178,12 @@ public class H5Ex_T_StringAttribute {
}
private static void ReadDataset() {
long file_id = -1;
long filetype_id = -1;
long memtype_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long attribute_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long filetype_id = HDF5Constants.H5I_INVALID_HID;
long memtype_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long attribute_id = HDF5Constants.H5I_INVALID_HID;
long sdim = 0;
long[] dims = { DIM0 };
byte[][] dset_data;

15
java/examples/datatypes/H5Ex_T_VLString.java
View File

@@ -1,6 +1,5 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
@@ -26,10 +25,10 @@ public class H5Ex_T_VLString
private static String DATASETNAME = "DS1";
private static void createDataset() {
long file_id = -1;
long type_id = -1;
long dataspace_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long type_id = HDF5Constants.H5I_INVALID_HID;
long dataspace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
int rank = 1;
String[] str_data = { "Parting", "is such", "sweet", "sorrow." };
long[] dims = { str_data.length };
@@ -93,9 +92,9 @@ public class H5Ex_T_VLString
}
private static void readDataset() {
long file_id = -1;
long type_id = -1;
long dataset_id = -1;
long file_id = HDF5Constants.H5I_INVALID_HID;
long type_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
String[] str_data = { "", "", "", "" };
try {

1
java/examples/datatypes/JavaDatatypeExample.sh.in
View File

@@ -1,7 +1,6 @@
#! /bin/sh
#
# Copyright by The HDF Group.
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including

1
java/examples/datatypes/Makefile.am
View File

@@ -1,6 +1,5 @@
#
# Copyright by The HDF Group.
# Copyright by the Board of Trustees of the University of Illinois.
# All rights reserved.
#
# This file is part of HDF5. The full HDF5 copyright notice, including