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Add java to format source (#1690)

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This commit is contained in:
Allen Byrne
2022-04-25 20:32:50 -05:00
committed by GitHub
parent d19d9b4c8a
commit 41a36efde1
155 changed files with 12051 additions and 9135 deletions
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100
java/examples/datasets/H5Ex_D_Checksum.java
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@@ -30,42 +30,46 @@ import hdf.hdf5lib.H5;
import hdf.hdf5lib.HDF5Constants;
public class H5Ex_D_Checksum {
private static String FILENAME = "H5Ex_D_Checksum.h5";
private static String FILENAME = "H5Ex_D_Checksum.h5";
private static String DATASETNAME = "DS1";
private static final int DIM_X = 32;
private static final int DIM_Y = 64;
private static final int CHUNK_X = 4;
private static final int CHUNK_Y = 8;
private static final int RANK = 2;
private static final int NDIMS = 2;
private static final int DIM_X = 32;
private static final int DIM_Y = 64;
private static final int CHUNK_X = 4;
private static final int CHUNK_Y = 8;
private static final int RANK = 2;
private static final int NDIMS = 2;
// Values for the status of space allocation
enum H5Z_filter {
H5Z_FILTER_ERROR(-1), H5Z_FILTER_NONE(0), H5Z_FILTER_DEFLATE(1), H5Z_FILTER_SHUFFLE(2), H5Z_FILTER_FLETCHER32(3), H5Z_FILTER_SZIP(
4), H5Z_FILTER_NBIT(5), H5Z_FILTER_SCALEOFFSET(6), H5Z_FILTER_RESERVED(256), H5Z_FILTER_MAX(65535);
H5Z_FILTER_ERROR(-1),
H5Z_FILTER_NONE(0),
H5Z_FILTER_DEFLATE(1),
H5Z_FILTER_SHUFFLE(2),
H5Z_FILTER_FLETCHER32(3),
H5Z_FILTER_SZIP(4),
H5Z_FILTER_NBIT(5),
H5Z_FILTER_SCALEOFFSET(6),
H5Z_FILTER_RESERVED(256),
H5Z_FILTER_MAX(65535);
private static final Map<Integer, H5Z_filter> lookup = new HashMap<Integer, H5Z_filter>();
static {
static
{
for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class))
lookup.put(s.getCode(), s);
}
private int code;
H5Z_filter(int layout_type) {
this.code = layout_type;
}
H5Z_filter(int layout_type) { this.code = layout_type; }
public int getCode() {
return this.code;
}
public int getCode() { return this.code; }
public static H5Z_filter get(int code) {
return lookup.get(code);
}
public static H5Z_filter get(int code) { return lookup.get(code); }
}
private static boolean checkFletcher32Filter() {
private static boolean checkFletcher32Filter()
{
try {
int available = H5.H5Zfilter_avail(H5Z_filter.H5Z_FILTER_FLETCHER32.getCode());
if (available == 0) {
@@ -79,8 +83,8 @@ public class H5Ex_D_Checksum {
try {
int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_FLETCHER32);
if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0)
|| ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) {
if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) ||
((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) {
System.out.println("N-Bit filter not available for encoding and decoding.");
return false;
}
@@ -91,13 +95,14 @@ public class H5Ex_D_Checksum {
return true;
}
private static void writeChecksum() {
long file_id = HDF5Constants.H5I_INVALID_HID;
private static void writeChecksum()
{
long file_id = HDF5Constants.H5I_INVALID_HID;
long filespace_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long dcpl_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM_X, DIM_Y };
long[] chunk_dims = { CHUNK_X, CHUNK_Y };
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long dcpl_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = {DIM_X, DIM_Y};
long[] chunk_dims = {CHUNK_X, CHUNK_Y};
int[][] dset_data = new int[DIM_X][DIM_Y];
// Initialize data.
@@ -108,7 +113,7 @@ public class H5Ex_D_Checksum {
// Create a new file using default properties.
try {
file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
HDF5Constants.H5P_DEFAULT);
HDF5Constants.H5P_DEFAULT);
}
catch (Exception e) {
e.printStackTrace();
@@ -140,7 +145,7 @@ public class H5Ex_D_Checksum {
try {
if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0))
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id,
HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT);
HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT);
}
catch (Exception e) {
e.printStackTrace();
@@ -149,8 +154,8 @@ public class H5Ex_D_Checksum {
// Write the data to the dataset.
try {
if (dataset_id >= 0)
H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
HDF5Constants.H5P_DEFAULT, dset_data);
H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
}
catch (Exception e) {
e.printStackTrace();
@@ -191,10 +196,11 @@ public class H5Ex_D_Checksum {
}
}
private static void readChecksum() {
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long dcpl_id = HDF5Constants.H5I_INVALID_HID;
private static void readChecksum()
{
long file_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long dcpl_id = HDF5Constants.H5I_INVALID_HID;
int[][] dset_data = new int[DIM_X][DIM_Y];
// Open an existing file.
@@ -228,14 +234,14 @@ public class H5Ex_D_Checksum {
try {
if (dcpl_id >= 0) {
// Java lib requires a valid filter_name object and cd_values
int[] flags = { 0 };
long[] cd_nelmts = { 1 };
int[] cd_values = { 0 };
String[] filter_name = { "" };
int[] filter_config = { 0 };
int filter_type = -1;
filter_type = H5
.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config);
int[] flags = {0};
long[] cd_nelmts = {1};
int[] cd_values = {0};
String[] filter_name = {""};
int[] filter_config = {0};
int filter_type = -1;
filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name,
filter_config);
System.out.print("Filter type is: ");
switch (H5Z_filter.get(filter_type)) {
case H5Z_FILTER_DEFLATE:
@@ -264,7 +270,7 @@ public class H5Ex_D_Checksum {
try {
if (dataset_id >= 0) {
int status = H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
// Check if the read was successful. Normally we do not perform
// error checking in these examples for the sake of clarity, but in
// this case we will make an exception because this is how the
@@ -328,7 +334,8 @@ public class H5Ex_D_Checksum {
}
}
public static void main(String[] args) {
public static void main(String[] args)
{
// Check if the Fletcher32 filter is available and can be used for
// both encoding and decoding. Normally we do not perform error
// checking in these examples for the sake of clarity, but in this
@@ -340,5 +347,4 @@ public class H5Ex_D_Checksum {
H5Ex_D_Checksum.readChecksum();
}
}
}