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Update top-level COPYING file and remove COPYING files from subdirectories (#561)

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* Modify temporary rpath for testing in java example scripts.

* Update URL in source file Copyright headers for web copy of COPYING (license) file.

* Add release_docs/code-conventions.md file.

* Add script to test h5py.

* Fix script error.

* Add file h5pytest.yml.

* Test declaration of counter variables in for loops.

* Committing clang-format changes

* Committing clang-format changes

* Added [] to line 126 of H5LTanalyze.l.
Ran bin/genparser with flex v2.6.4 and Bison v3.0.4 on jelly.

* Revert "Added [] to line 126 of H5LTanalyze.l."

This reverts commit e4a9cee441.

* Revert extra commits to match canonical develop.

* Update top-level COPYING file and remove COPYING files from
subdirectories.

* Remove subdirectory COPYING files from MANIFEST.

Co-authored-by: github-actions <41898282+github-actions[bot]@users.noreply.github.com>
This commit is contained in:
Larry Knox
2021-04-21 11:23:34 -05:00
committed by GitHub
parent 99d5505ad1
commit 3707675c03
20 changed files with 6 additions and 251 deletions
Download Patch File Download Diff File Expand all files Collapse all files

6
COPYING
View File

@@ -67,6 +67,12 @@ under Prime Contract No. DE-AC02-05CH11231.
----------------------------------------------------------------------------- -----------------------------------------------------------------------------
Portions of HDF5 were developed with support from Lawrence Livermore
National Laboratory and the United States Department of Energy under
Prime Contract No. DE-AC52-07NA27344.
-----------------------------------------------------------------------------
Portions of HDF5 were developed with support from the University of Portions of HDF5 were developed with support from the University of
California, Lawrence Livermore National Laboratory (UC LLNL). California, Lawrence Livermore National Laboratory (UC LLNL).
The following statement applies to those portions of the product and must The following statement applies to those portions of the product and must

18
MANIFEST
View File

@@ -63,7 +63,6 @@
./m4/ax_try_compile_java.m4 ./m4/ax_try_compile_java.m4
./m4/ax_try_run_java.m4 ./m4/ax_try_run_java.m4
./bin/COPYING
./bin/bbrelease _DO_NOT_DISTRIBUTE_ ./bin/bbrelease _DO_NOT_DISTRIBUTE_
./bin/buildhdf5 ./bin/buildhdf5
./bin/checkapi _DO_NOT_DISTRIBUTE_ ./bin/checkapi _DO_NOT_DISTRIBUTE_
@@ -122,7 +121,6 @@
./bin/pkgscrpts/makeInternalREADME.pl _DO_NOT_DISTRIBUTE_ ./bin/pkgscrpts/makeInternalREADME.pl _DO_NOT_DISTRIBUTE_
./bin/pkgscrpts/makeOuterREADME.pl _DO_NOT_DISTRIBUTE_ ./bin/pkgscrpts/makeOuterREADME.pl _DO_NOT_DISTRIBUTE_
./config/COPYING
./config/BlankForm ./config/BlankForm
./config/apple ./config/apple
./config/cce-fflags ./config/cce-fflags
@@ -283,7 +281,6 @@
# #
#------------------------------------------------------------------------------ #------------------------------------------------------------------------------
./fortran/COPYING
./fortran/Makefile.am ./fortran/Makefile.am
./fortran/robodoc.rc ./fortran/robodoc.rc
@@ -415,7 +412,6 @@
# #
#------------------------------------------------------------------------------ #------------------------------------------------------------------------------
./c++/COPYING
./c++/Makefile.am ./c++/Makefile.am
./c++/examples/chunks.cpp ./c++/examples/chunks.cpp
@@ -546,7 +542,6 @@
# #
#------------------------------------------------------------------------------ #------------------------------------------------------------------------------
./release_docs/COPYING
./release_docs/HISTORY-1_0-1_8_0_rc3.txt ./release_docs/HISTORY-1_0-1_8_0_rc3.txt
./release_docs/HISTORY-1_8_0-1_10_0.txt ./release_docs/HISTORY-1_8_0-1_10_0.txt
./release_docs/HISTORY-1_10_0-1_12_0.txt ./release_docs/HISTORY-1_10_0-1_12_0.txt
@@ -569,7 +564,6 @@
./src/hdf5.lnt _DO_NOT_DISTRIBUTE_ ./src/hdf5.lnt _DO_NOT_DISTRIBUTE_
./src/hdf5-win.lnt _DO_NOT_DISTRIBUTE_ ./src/hdf5-win.lnt _DO_NOT_DISTRIBUTE_
./src/hdf5-lin.lnt _DO_NOT_DISTRIBUTE_ ./src/hdf5-lin.lnt _DO_NOT_DISTRIBUTE_
./src/COPYING
./src/H5.c ./src/H5.c
./src/H5checksum.c ./src/H5checksum.c
./src/H5dbg.c ./src/H5dbg.c
@@ -1076,7 +1070,6 @@
./src/H5win32defs.h ./src/H5win32defs.h
./test/AtomicWriterReader.txt ./test/AtomicWriterReader.txt
./test/COPYING
./test/H5srcdir.h ./test/H5srcdir.h
./test/H5srcdir_str.h.in ./test/H5srcdir_str.h.in
./test/Makefile.am ./test/Makefile.am
@@ -1437,7 +1430,6 @@
./test/testfiles/plist_files/strcpl_64be ./test/testfiles/plist_files/strcpl_64be
./test/testfiles/plist_files/strcpl_64le ./test/testfiles/plist_files/strcpl_64le
./testpar/COPYING
./testpar/Makefile.am ./testpar/Makefile.am
./testpar/t_bigio.c ./testpar/t_bigio.c
./testpar/t_cache.c ./testpar/t_cache.c
@@ -1469,7 +1461,6 @@
./testpar/testphdf5.c ./testpar/testphdf5.c
./testpar/testphdf5.h ./testpar/testphdf5.h
./tools/COPYING
./tools/Makefile.am ./tools/Makefile.am
./tools/src/Makefile.am ./tools/src/Makefile.am
./tools/test/Makefile.am ./tools/test/Makefile.am
@@ -2893,7 +2884,6 @@
./tools/testfiles/h5mkgrp_single_p.ls ./tools/testfiles/h5mkgrp_single_p.ls
./tools/testfiles/h5mkgrp_single_l.ls ./tools/testfiles/h5mkgrp_single_l.ls
./tools/test/perform/COPYING
./tools/test/perform/Makefile.am ./tools/test/perform/Makefile.am
./tools/test/perform/build_h5perf_alone.sh ./tools/test/perform/build_h5perf_alone.sh
./tools/test/perform/build_h5perf_serial_alone.sh ./tools/test/perform/build_h5perf_serial_alone.sh
@@ -2918,7 +2908,6 @@
./tools/test/perform/zip_perf.c ./tools/test/perform/zip_perf.c
# Utils directory # Utils directory
./utils/COPYING
./utils/Makefile.am ./utils/Makefile.am
# Mirror VFD utilities # Mirror VFD utilities
@@ -2930,7 +2919,6 @@
./utils/mirror_vfd/mirror_writer.c ./utils/mirror_vfd/mirror_writer.c
# high level libraries # high level libraries
./hl/COPYING
./hl/Makefile.am ./hl/Makefile.am
./hl/examples/Makefile.am ./hl/examples/Makefile.am
./hl/examples/ex_ds1.c ./hl/examples/ex_ds1.c
@@ -2957,7 +2945,6 @@
./hl/examples/ptExampleFL.c ./hl/examples/ptExampleFL.c
./hl/examples/run-hl-ex.sh ./hl/examples/run-hl-ex.sh
./hl/examples/run-hlc-ex.sh.in ./hl/examples/run-hlc-ex.sh.in
./hl/src/COPYING
./hl/src/Makefile.am ./hl/src/Makefile.am
./hl/src/H5DO.c ./hl/src/H5DO.c
./hl/src/H5DOpublic.h ./hl/src/H5DOpublic.h
@@ -2986,7 +2973,6 @@
./hl/src/H5TBprivate.h ./hl/src/H5TBprivate.h
./hl/src/H5TBpublic.h ./hl/src/H5TBpublic.h
./hl/src/hdf5_hl.h ./hl/src/hdf5_hl.h
./hl/test/COPYING
./hl/test/H5srcdir_str.h.in ./hl/test/H5srcdir_str.h.in
./hl/test/Makefile.am ./hl/test/Makefile.am
./hl/test/dsdata.txt ./hl/test/dsdata.txt
@@ -3022,7 +3008,6 @@
./hl/test/usa.wri ./hl/test/usa.wri
# tools # tools
./hl/tools/COPYING
./hl/tools/Makefile.am ./hl/tools/Makefile.am
./hl/tools/gif2h5/Makefile.am ./hl/tools/gif2h5/Makefile.am
./hl/tools/gif2h5/decompress.c ./hl/tools/gif2h5/decompress.c
@@ -3087,7 +3072,6 @@
./hl/tools/testfiles/w-help1.ddl ./hl/tools/testfiles/w-help1.ddl
# hl fortran # hl fortran
./hl/fortran/COPYING
./hl/fortran/Makefile.am ./hl/fortran/Makefile.am
./hl/fortran/examples/Makefile.am ./hl/fortran/examples/Makefile.am
./hl/fortran/examples/run-hlfortran-ex.sh.in ./hl/fortran/examples/run-hlfortran-ex.sh.in
@@ -3112,7 +3096,6 @@
./hl/fortran/test/tsttable.F90 ./hl/fortran/test/tsttable.F90
# hl c++ # hl c++
./hl/c++/COPYING
./hl/c++/Makefile.am ./hl/c++/Makefile.am
./hl/c++/examples/Makefile.am ./hl/c++/examples/Makefile.am
./hl/c++/examples/ptExampleFL.cpp ./hl/c++/examples/ptExampleFL.cpp
@@ -3125,7 +3108,6 @@
./hl/c++/test/Makefile.am ./hl/c++/test/Makefile.am
# java # java
./java/COPYING
./java/Makefile.am ./java/Makefile.am
./java/CMakeLists.txt ./java/CMakeLists.txt

13
bin/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
c++/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
config/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
fortran/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
hl/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
hl/c++/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
hl/fortran/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
hl/src/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
hl/test/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
hl/tools/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
java/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
release_docs/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
src/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
test/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
testpar/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
tools/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

13
tools/test/perform/COPYING
View File

@@ -1,13 +0,0 @@
Copyright by The HDF Group and
The Board of Trustees of the University of Illinois.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.

12
utils/COPYING
View File

@@ -1,12 +0,0 @@
Copyright by The HDF Group.
All rights reserved.
The files and subdirectories in this directory are part of HDF5.
The full HDF5 copyright notice, including terms governing use,
modification, and redistribution, is contained in the COPYING file
which can be found at the root of the source code distribution tree
or in https://www.hdfgroup.org/licenses. If you do
not have access to either file, you may request a copy from
help@hdfgroup.org.